Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G207300.1 | Wheat | nucleus | 95.62 | 95.27 |
| HORVU6Hr1G057670.3 | Barley | nucleus | 91.97 | 93.33 |
| TraesCS6A01G227700.1 | Wheat | nucleus | 92.34 | 92.34 |
| KRH62917 | Soybean | nucleus | 28.83 | 75.96 |
| KRH33348 | Soybean | nucleus | 28.1 | 75.49 |
| KRH55348 | Soybean | nucleus | 33.58 | 74.19 |
| KRH11843 | Soybean | nucleus | 33.21 | 73.39 |
| KRH75688 | Soybean | nucleus | 27.37 | 69.44 |
| EES07157 | Sorghum | nucleus | 70.8 | 67.36 |
| Zm00001d017243_P001 | Maize | nucleus | 67.52 | 65.84 |
| Os02t0618400-02 | Rice | nucleus | 68.98 | 65.4 |
| GSMUA_Achr11P... | Banana | nucleus | 47.45 | 61.03 |
| TraesCS2B01G381800.1 | Wheat | nucleus | 55.47 | 58.91 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 48.18 | 57.14 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 50.37 | 56.79 |
| Zm00001d051117_P001 | Maize | nucleus | 57.3 | 56.27 |
| GSMUA_Achr11P... | Banana | nucleus | 46.72 | 55.65 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 40.88 | 54.9 |
| PGSC0003DMT400069955 | Potato | nucleus | 41.61 | 49.78 |
| VIT_05s0049g02260.t01 | Wine grape | nucleus | 45.62 | 48.83 |
| Solyc05g053150.1.1 | Tomato | nucleus | 40.15 | 48.03 |
| KRG92245 | Soybean | nucleus | 43.43 | 46.85 |
| KRG90311 | Soybean | nucleus | 44.16 | 46.54 |
| PGSC0003DMT400003796 | Potato | nucleus | 42.7 | 46.25 |
| Solyc09g090790.2.1 | Tomato | nucleus | 42.34 | 46.22 |
| KRH04452 | Soybean | nucleus | 44.53 | 46.04 |
| CDX77436 | Canola | nucleus | 43.07 | 45.38 |
| CDY61190 | Canola | nucleus | 42.7 | 44.83 |
| KRH34553 | Soybean | nucleus | 43.07 | 44.36 |
| CDY49231 | Canola | nucleus | 43.07 | 44.03 |
| Solyc02g089190.1.1 | Tomato | nucleus | 38.32 | 43.93 |
| Bra015029.1-P | Field mustard | nucleus | 43.43 | 43.91 |
| TraesCS4B01G344000.1 | Wheat | nucleus | 39.42 | 43.9 |
| VIT_14s0083g01060.t01 | Wine grape | nucleus | 39.05 | 43.32 |
| AT3G24310.1 | Thale cress | nucleus | 42.34 | 43.12 |
| CDX93006 | Canola | nucleus | 43.07 | 43.07 |
| Bra001941.1-P | Field mustard | nucleus | 43.07 | 43.07 |
| PGSC0003DMT400003479 | Potato | nucleus | 37.23 | 42.86 |
| CDX94829 | Canola | nucleus | 42.7 | 42.86 |
| Bra028369.1-P | Field mustard | nucleus | 42.7 | 42.7 |
| CDY64694 | Canola | nucleus | 42.7 | 42.7 |
| AT4G13480.1 | Thale cress | nucleus | 39.78 | 41.76 |
| CDX85285 | Canola | nucleus | 39.78 | 40.37 |
| Bra025410.1-P | Field mustard | nucleus | 39.42 | 40.3 |
| CDX86354 | Canola | nucleus | 39.42 | 40.3 |
| CDY45895 | Canola | nucleus | 37.59 | 40.08 |
| Bra020744.1-P | Field mustard | nucleus | 37.59 | 40.08 |
| Bra036202.1-P | Field mustard | nucleus | 39.05 | 40.07 |
| CDY19978 | Canola | nucleus | 39.05 | 40.07 |
| CDY00083 | Canola | nucleus | 39.42 | 40.0 |
| KRH01379 | Soybean | nucleus | 36.86 | 39.15 |
| KRH33568 | Soybean | nucleus | 44.89 | 38.44 |
| AT3G30210.1 | Thale cress | nucleus | 38.69 | 38.41 |
| KRH45095 | Soybean | nucleus | 35.4 | 35.27 |
| KRH01378 | Soybean | nucleus | 35.77 | 35.13 |
| TraesCS5B01G089200.1 | Wheat | nucleus | 29.56 | 34.18 |
| TraesCS3B01G258800.1 | Wheat | nucleus | 25.91 | 33.33 |
| TraesCS4B01G143700.1 | Wheat | nucleus | 28.83 | 33.19 |
| CDY35782 | Canola | nucleus | 23.72 | 31.71 |
| TraesCS3B01G612200.2 | Wheat | nucleus | 29.93 | 31.06 |
| TraesCS5B01G093000.1 | Wheat | nucleus | 29.56 | 29.14 |
| TraesCS1B01G055200.1 | Wheat | nucleus | 28.47 | 29.1 |
| TraesCS1B01G436800.1 | Wheat | nucleus | 18.98 | 27.51 |
| TraesCS4B01G179500.1 | Wheat | nucleus | 31.75 | 27.36 |
| TraesCS3B01G453300.1 | Wheat | nucleus | 29.93 | 26.71 |
| TraesCS1B01G094500.1 | Wheat | nucleus | 31.02 | 26.07 |
| TraesCS3B01G039100.1 | Wheat | nucleus | 31.02 | 24.22 |
| TraesCS2B01G112600.1 | Wheat | nucleus | 29.2 | 24.1 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G254200.1 | EnsemblPlantsGene:TraesCS6B01G254200 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF574 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr6B:-:457216217..457217304
Molecular Weight (calculated)
30623.5 Da
IEP (calculated)
6.045
GRAVY (calculated)
-0.818
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQFGWGREE GGWRKGPWTA QEDKLLLGYV RQQGEGRWNS VAKLTGLKRS GKSCRLRWVN YLRPDLKRGK ITPQEESVIL ELHALWGNRW STIARSLPGR
101: TDNEIKNYWR THFKKGKPSS KNIERARARF LKQRREIMQG HHEHQRDVQD DDGTASADNT GGGAAIQHAD EATTRPTPPP AQDDDLAMMR DMADTDDFLQ
201: YDHHPMSMSA YFLLDGGDGA TSDAGSSGEI TSCGATWGSL WNLDDVDVVD DVDGGGACGW GSFALLQDHG LAFY
101: TDNEIKNYWR THFKKGKPSS KNIERARARF LKQRREIMQG HHEHQRDVQD DDGTASADNT GGGAAIQHAD EATTRPTPPP AQDDDLAMMR DMADTDDFLQ
201: YDHHPMSMSA YFLLDGGDGA TSDAGSSGEI TSCGATWGSL WNLDDVDVVD DVDGGGACGW GSFALLQDHG LAFY
001: MVEEVWRKGP WTAEEDRLLI EYVRVHGEGR WNSVSKLAGL KRNGKSCRLR WVNYLRPDLK RGQITPHEES IILELHAKWG NRWSTIARSL PGRTDNEIKN
101: YWRTHFKKKA KPTTNNAEKI KSRLLKRQHF KEQREIELQQ EQQLFQFDQL GMKKIISLLE ENNSSSSSDG GGDVFYYPDQ ITHSSKPFGY NSNSLEEQLQ
201: GRFSPVNIPD ANTMNEDNAI WDGFWNMDVV NGHGGNLGVV AATAACGPRK PYFHNLVIPF C
101: YWRTHFKKKA KPTTNNAEKI KSRLLKRQHF KEQREIELQQ EQQLFQFDQL GMKKIISLLE ENNSSSSSDG GGDVFYYPDQ ITHSSKPFGY NSNSLEEQLQ
201: GRFSPVNIPD ANTMNEDNAI WDGFWNMDVV NGHGGNLGVV AATAACGPRK PYFHNLVIPF C
Arabidopsis Description
AtMYB79Myb domain protein 79 [Source:UniProtKB/TrEMBL;Acc:Q9T0G9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.