Factsheet for Bra036202.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19978	Canola	nucleus	100.0	100.0
Bra025410.1-P	Field mustard	nucleus	79.4	79.1
Bra020744.1-P	Field mustard	nucleus	73.03	75.88
AT3G30210.1	Thale cress	nucleus	76.78	74.28
Solyc02g089190.1.1	Tomato	nucleus	46.07	51.46
VIT_14s0083g01060.t01	Wine grape	nucleus	47.19	51.01
PGSC0003DMT400003479	Potato	nucleus	45.32	50.84
KRH01379	Soybean	nucleus	43.45	44.96
GSMUA_Achr11P...	Banana	nucleus	35.58	44.6
GSMUA_Achr4P29230_001	Banana	nucleus	33.33	43.63
KRH45095	Soybean	nucleus	44.57	43.27
KRH01378	Soybean	nucleus	43.82	41.94
GSMUA_Achr8P12710_001	Banana	nucleus	35.96	41.56
GSMUA_Achr11P...	Banana	nucleus	35.58	41.3
TraesCS2D01G361600.1	Wheat	nucleus	39.33	40.86
TraesCS2B01G381800.1	Wheat	nucleus	39.33	40.7
HORVU2Hr1G087990.1	Barley	nucleus	39.33	40.54
HORVU0Hr1G005100.1	Barley	nucleus	34.08	40.44
TraesCS2A01G363800.1	Wheat	nucleus	39.33	40.38
GSMUA_Achr1P03450_001	Banana	nucleus	36.7	40.33
Bra015029.1-P	Field mustard	nucleus	40.82	40.22
HORVU6Hr1G057670.3	Barley	nucleus	40.45	40.0
Zm00001d048383_P001	Maize	nucleus	34.46	39.66
Bra028369.1-P	Field mustard	nucleus	40.07	39.05
TraesCS6B01G254200.1	Wheat	nucleus	40.07	39.05
Bra001941.1-P	Field mustard	nucleus	39.7	38.69
TraesCS6A01G227700.1	Wheat	nucleus	39.7	38.69
Zm00001d017243_P001	Maize	nucleus	40.45	38.43
EES07157	Sorghum	nucleus	41.2	38.19
TraesCS6D01G207300.1	Wheat	nucleus	39.33	38.18
Os03t0142600-00	Rice	nucleus	35.21	38.06
Os02t0618400-02	Rice	nucleus	40.82	37.72
Zm00001d025823_P001	Maize	nucleus	38.95	37.41
Zm00001d027623_P001	Maize	nucleus	34.46	36.95
KXG26684	Sorghum	nucleus	38.58	36.52
TraesCS4D01G339100.1	Wheat	nucleus	33.71	36.44
EER92876	Sorghum	nucleus	34.46	36.36
TraesCS4B01G344000.1	Wheat	nucleus	33.33	36.18
Os04t0508500-01	Rice	nucleus	37.83	35.94
TraesCS5A01G512700.1	Wheat	nucleus	33.33	35.89
Bra001005.1-P	Field mustard	nucleus	26.59	34.13
Bra020289.1-P	Field mustard	nucleus	29.96	33.9
HORVU4Hr1G084360.3	Barley	nucleus	34.08	33.83
Bra039108.1-P	Field mustard	nucleus	25.84	33.66
Bra006694.1-P	Field mustard	nucleus	30.34	33.47
Bra002533.1-P	Field mustard	nucleus	28.84	32.49
Zm00001d051117_P001	Maize	nucleus	33.71	32.26
Bra018223.1-P	Field mustard	nucleus	29.59	31.35
Bra028550.1-P	Field mustard	nucleus	28.09	31.25
Bra039067.1-P	Field mustard	nucleus	26.97	31.03
Bra006977.1-P	Field mustard	nucleus	28.09	30.61
Bra025300.1-P	Field mustard	nucleus	26.59	30.6
Bra004041.1-P	Field mustard	nucleus	29.21	27.66
Bra021389.1-P	Field mustard	nucleus	28.09	27.57
Bra012482.1-P	Field mustard	nucleus	29.21	27.46
Bra004297.1-P	Field mustard	nucleus	28.84	27.11
Bra004473.1-P	Field mustard	nucleus	27.72	26.91
Bra024760.1-P	Field mustard	nucleus	26.22	26.32
Bra001202.1-P	Field mustard	nucleus	29.21	25.66
Bra033948.1-P	Field mustard	nucleus	26.97	25.26
Bra040274.1-P	Field mustard	nucleus	29.59	24.69
Bra020624.1-P	Field mustard	nucleus	29.21	24.53
Bra029582.1-P	Field mustard	nucleus	28.84	23.91
Bra010021.1-P	Field mustard	nucleus	28.84	23.84
Bra010022.1-P	Field mustard	nucleus	28.84	23.84

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EnsemblPlantsGene:Bra036202	EnsemblPlants:Bra036202.1	EnsemblPlants:Bra036202.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M4F546
InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF572	InterPro:SANT/Myb
SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0002541E44	SEG:seg	:	:

Description

AT3G30210 (E=2e-105) ATMYB121, MYB121 | MYB121 (MYB DOMAIN PROTEIN 121); DNA binding / transcription factor

Coordinates

chrA09:+:2207924..2209946

Molecular Weight (calculated)

31011.8 Da

IEP (calculated)

8.294

GRAVY (calculated)

-1.114

Length

267 amino acids

Sequence
(BLAST)

001: MLYWGVDQVH HPNHDQDPYK QQQQQGCRKG PWTPEEDKLL GEYVSSNGEG RWSTVAKSAG LNRSSKSCRL RWVNYLRPGL KRGQITPQEE GIILELHSLW
101: GNKWSTIARY LPGRTDNEIK NYWRTHYKKK EKSFSKQEKL RRSRKQFDLK PQPQLQNQQS KLVSEDHINL DNKQNIATYF SYPTSVYNDK FHMPQNVAAT
201: SSDHSMIDEG NFWCSLWSLE DDDPHGGSEQ RTTTSIAEKF NGGGNEAPSC GSWDYSYNEF YNGGYIF

Best Arabidopsis Sequence Match ( AT3G30210.1 )
(BLAST)

001: MLDWGVQGHH QKHDHDIYQQ QHQQQGCRKG PWTLEEDKLL AEYVTSHGEG RWSTVAKCAG LNRSGKSCRL RWVNYLRPGL KRGQITPQEE GIILELHSLW
101: GNKWSTIARY LPGRTDNEIK NYWRTHYKKN QKSSSKQDKV KKSLSRKQQQ VDLKPQPQAQ SENHQSQLVS QDHMNIDNDH NIASSLYYPT SVFDDKLYMP
201: QSVATTSSDH SMIDEGHLWG SLWNLDEDDP HSFGGGSGQG TAADIDEKFP DSGIEAPSCG SGDYSYTGVY MGGYIF

Arabidopsis Description

ATMYB121MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LRU5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.