Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH62917 | Soybean | nucleus | 33.48 | 74.04 |
| KRH33348 | Soybean | nucleus | 32.17 | 72.55 |
| KRH55348 | Soybean | nucleus | 38.7 | 71.77 |
| KRH11843 | Soybean | nucleus | 38.26 | 70.97 |
| KRH75688 | Soybean | nucleus | 31.74 | 67.59 |
| GSMUA_Achr11P... | Banana | nucleus | 62.17 | 67.14 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 65.22 | 64.94 |
| GSMUA_Achr4P19990_001 | Banana | nucleus | 32.61 | 58.59 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 51.74 | 58.33 |
| GSMUA_Achr3P01370_001 | Banana | nucleus | 29.57 | 54.84 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 57.39 | 54.32 |
| HORVU0Hr1G005100.1 | Barley | nucleus | 49.13 | 50.22 |
| TraesCS2A01G363800.1 | Wheat | nucleus | 55.22 | 48.85 |
| TraesCS2B01G381800.1 | Wheat | nucleus | 54.78 | 48.84 |
| Zm00001d017243_P001 | Maize | nucleus | 59.57 | 48.75 |
| HORVU2Hr1G087990.1 | Barley | nucleus | 54.78 | 48.65 |
| TraesCS2D01G361600.1 | Wheat | nucleus | 54.35 | 48.64 |
| HORVU6Hr1G057670.3 | Barley | nucleus | 56.52 | 48.15 |
| VIT_05s0049g02260.t01 | Wine grape | nucleus | 53.04 | 47.66 |
| EES07157 | Sorghum | nucleus | 58.7 | 46.88 |
| PGSC0003DMT400069955 | Potato | nucleus | 46.52 | 46.72 |
| TraesCS6B01G254200.1 | Wheat | nucleus | 55.65 | 46.72 |
| TraesCS6D01G207300.1 | Wheat | nucleus | 55.65 | 46.55 |
| KRG92245 | Soybean | nucleus | 51.3 | 46.46 |
| TraesCS6A01G227700.1 | Wheat | nucleus | 55.22 | 46.35 |
| PGSC0003DMT400003796 | Potato | nucleus | 50.87 | 46.25 |
| Solyc09g090790.2.1 | Tomato | nucleus | 50.0 | 45.82 |
| KRH34553 | Soybean | nucleus | 52.61 | 45.49 |
| Solyc05g053150.1.1 | Tomato | nucleus | 45.22 | 45.41 |
| KXG26684 | Sorghum | nucleus | 55.65 | 45.39 |
| Os02t0618400-02 | Rice | nucleus | 56.96 | 45.33 |
| Zm00001d025823_P001 | Maize | nucleus | 54.78 | 45.32 |
| Zm00001d048383_P001 | Maize | nucleus | 44.78 | 44.4 |
| KRG90311 | Soybean | nucleus | 50.0 | 44.23 |
| KRH04452 | Soybean | nucleus | 50.87 | 44.15 |
| Os03t0142600-00 | Rice | nucleus | 47.39 | 44.13 |
| Os04t0508500-01 | Rice | nucleus | 53.91 | 44.13 |
| TraesCS5A01G512700.1 | Wheat | nucleus | 47.39 | 43.95 |
| CDX77436 | Canola | nucleus | 49.57 | 43.85 |
| TraesCS4B01G344000.1 | Wheat | nucleus | 46.52 | 43.5 |
| TraesCS4D01G339100.1 | Wheat | nucleus | 46.52 | 43.32 |
| CDY61190 | Canola | nucleus | 49.13 | 43.3 |
| AT3G24310.1 | Thale cress | nucleus | 50.43 | 43.12 |
| CDY49231 | Canola | nucleus | 49.57 | 42.54 |
| Bra015029.1-P | Field mustard | nucleus | 50.0 | 42.44 |
| VIT_14s0083g01060.t01 | Wine grape | nucleus | 45.22 | 42.11 |
| Bra001941.1-P | Field mustard | nucleus | 50.0 | 41.97 |
| CDX93006 | Canola | nucleus | 50.0 | 41.97 |
| Zm00001d027623_P001 | Maize | nucleus | 45.22 | 41.77 |
| GSMUA_Achr5P21090_001 | Banana | nucleus | 33.04 | 41.76 |
| EER92876 | Sorghum | nucleus | 45.65 | 41.5 |
| Bra028369.1-P | Field mustard | nucleus | 49.13 | 41.24 |
| PGSC0003DMT400003479 | Potato | nucleus | 42.61 | 41.18 |
| CDX94829 | Canola | nucleus | 48.7 | 41.03 |
| Solyc02g089190.1.1 | Tomato | nucleus | 42.61 | 41.0 |
| CDY64694 | Canola | nucleus | 48.7 | 40.88 |
| AT4G13480.1 | Thale cress | nucleus | 46.09 | 40.61 |
| GSMUA_Achr10P... | Banana | nucleus | 30.87 | 40.57 |
| GSMUA_Achr3P12730_001 | Banana | nucleus | 30.87 | 40.57 |
| HORVU4Hr1G084360.3 | Barley | nucleus | 46.52 | 39.78 |
| GSMUA_Achr1P27270_001 | Banana | nucleus | 33.48 | 39.29 |
| GSMUA_Achr6P15370_001 | Banana | nucleus | 35.65 | 39.23 |
| GSMUA_Achr6P27290_001 | Banana | nucleus | 32.61 | 38.46 |
| Zm00001d051117_P001 | Maize | nucleus | 46.52 | 38.35 |
| KRH01379 | Soybean | nucleus | 42.17 | 37.6 |
| Bra025410.1-P | Field mustard | nucleus | 43.48 | 37.31 |
| CDX86354 | Canola | nucleus | 43.48 | 37.31 |
| Bra020744.1-P | Field mustard | nucleus | 41.3 | 36.97 |
| CDY45895 | Canola | nucleus | 41.3 | 36.97 |
| GSMUA_Achr1P21020_001 | Banana | nucleus | 31.3 | 36.92 |
| GSMUA_Achr9P28370_001 | Banana | nucleus | 34.35 | 36.92 |
| KRH33568 | Soybean | nucleus | 51.3 | 36.88 |
| CDX85285 | Canola | nucleus | 43.04 | 36.67 |
| GSMUA_Achr2P16200_001 | Banana | nucleus | 32.17 | 36.1 |
| GSMUA_Achr10P... | Banana | nucleus | 33.04 | 35.85 |
| Bra036202.1-P | Field mustard | nucleus | 41.3 | 35.58 |
| CDY19978 | Canola | nucleus | 41.3 | 35.58 |
| CDY00083 | Canola | nucleus | 41.74 | 35.56 |
| KRH45095 | Soybean | nucleus | 42.17 | 35.27 |
| GSMUA_Achr10P... | Banana | nucleus | 34.35 | 34.96 |
| AT3G30210.1 | Thale cress | nucleus | 41.74 | 34.78 |
| KRH01378 | Soybean | nucleus | 42.17 | 34.77 |
| GSMUA_Achr10P... | Banana | nucleus | 34.78 | 33.9 |
| GSMUA_Achr8P02640_001 | Banana | nucleus | 33.91 | 33.05 |
| GSMUA_Achr8P34340_001 | Banana | nucleus | 34.78 | 32.65 |
| GSMUA_Achr5P28350_001 | Banana | nucleus | 32.61 | 31.65 |
| GSMUA_Achr11P... | Banana | nucleus | 33.04 | 31.54 |
| GSMUA_Achr7P18200_001 | Banana | nucleus | 33.04 | 31.54 |
| GSMUA_Achr8P10800_001 | Banana | nucleus | 34.78 | 31.25 |
| GSMUA_Achr9P16640_001 | Banana | nucleus | 34.35 | 30.38 |
| GSMUA_Achr8P18460_001 | Banana | nucleus | 32.61 | 30.12 |
| GSMUA_Achr11P... | Banana | nucleus | 33.91 | 29.77 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.35 | 29.59 |
| GSMUA_Achr7P05570_001 | Banana | nucleus | 34.78 | 29.41 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.65 | 29.18 |
| GSMUA_Achr11P... | Banana | nucleus | 33.48 | 29.17 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.48 | 28.0 |
| GSMUA_Achr3P08370_001 | Banana | nucleus | 34.78 | 27.87 |
| GSMUA_Achr1P24960_001 | Banana | nucleus | 32.61 | 27.78 |
| GSMUA_Achr8P29910_001 | Banana | nucleus | 32.17 | 27.51 |
| CDY35782 | Canola | nucleus | 24.35 | 27.32 |
| GSMUA_Achr2P22640_001 | Banana | nucleus | 34.35 | 27.05 |
| GSMUA_Achr3P21060_001 | Banana | nucleus | 35.22 | 26.73 |
| GSMUA_Achr6P09760_001 | Banana | nucleus | 34.78 | 25.97 |
| GSMUA_Achr11P... | Banana | nucleus | 34.78 | 25.4 |
| GSMUA_Achr11P... | Banana | nucleus | 32.17 | 21.51 |
| GSMUA_Achr9P07000_001 | Banana | nucleus | 33.04 | 6.05 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P17190_001 | EnsemblPlants:GSMUA_Achr11T17190_001 | EnsemblPlantsGene:GSMUA_Achr11G17190_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| ncoils:Coil | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF574 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002950A40 | UniProt:M0RSZ9 | MapMan:15.5.2.1 | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G17190_001]
Coordinates
chr11:-:18859717..18860754
Molecular Weight (calculated)
26427.6 Da
IEP (calculated)
5.714
GRAVY (calculated)
-1.060
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGQLGWGTT EDGWRKGPWT VQEDQLLIEH VTLHGEGQWN SVSKLSGLRR SGKSCRLRWV NYLRPDLKRG SITPQEENTI QELHALWGNR WSAIARSLPG
101: RTDNEIKNYW RTHFKKDNTP RKKAERARAR LLVRQQQERQ KHKQQQQEAE DMGGTSTMKQ VEEDAMRAEE VQEMAYVLQG GGFQGYMSDE DGSWGCLWNL
201: DDDDDASEYT EGGSTSQQVS SSTNISFFIT
101: RTDNEIKNYW RTHFKKDNTP RKKAERARAR LLVRQQQERQ KHKQQQQEAE DMGGTSTMKQ VEEDAMRAEE VQEMAYVLQG GGFQGYMSDE DGSWGCLWNL
201: DDDDDASEYT EGGSTSQQVS SSTNISFFIT
001: MSLWGGMGGG WGMVEEGWRK GPWTAEEDRL LIDYVQLHGE GRWNSVARLA GLKRNGKSCR LRWVNYLRPD LKRGQITPHE ETIILELHAK WGNRWSTIAR
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNSAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMKKIMSL LDDDNNNGDN TFSSSSSGES GALYVPHQIT
201: HSTTTSGCEP NSNGYYPVVP VTIPEANVNE DNAIWDGLWN LDFEGQGSFG GAACAPRKHY FQNMVIPFC
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNSAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMKKIMSL LDDDNNNGDN TFSSSSSGES GALYVPHQIT
201: HSTTTSGCEP NSNGYYPVVP VTIPEANVNE DNAIWDGLWN LDFEGQGSFG GAACAPRKHY FQNMVIPFC
Arabidopsis Description
MYB305MYB305 [Source:UniProtKB/TrEMBL;Acc:A0A178VHM5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.