Factsheet for GSMUA_Achr8P18460_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P01370_001	Banana	nucleus	42.17	84.68
GSMUA_Achr10P...	Banana	nucleus	46.99	66.86
GSMUA_Achr4P19990_001	Banana	nucleus	34.14	66.41
GSMUA_Achr1P21020_001	Banana	nucleus	51.81	66.15
CDY58599	Canola	nucleus	26.51	62.26
GSMUA_Achr2P22640_001	Banana	nucleus	66.67	56.85
GSMUA_Achr5P21090_001	Banana	nucleus	39.76	54.4
GSMUA_Achr3P21060_001	Banana	nucleus	65.86	54.13
GSMUA_Achr6P09760_001	Banana	nucleus	66.67	53.9
GSMUA_Achr3P12730_001	Banana	nucleus	35.74	50.86
GSMUA_Achr11P...	Banana	nucleus	59.44	46.98
Solyc05g009230.1.1	Tomato	nucleus	49.0	44.53
PGSC0003DMT400037716	Potato	nucleus	48.59	44.32
GSMUA_Achr6P27290_001	Banana	nucleus	33.73	43.08
GSMUA_Achr1P27270_001	Banana	nucleus	33.33	42.35
Os01t0128000-01	Rice	nucleus	58.63	41.71
VIT_17s0000g03560.t01	Wine grape	nucleus	54.62	41.46
GSMUA_Achr11P...	Banana	nucleus	43.37	41.22
Bra004297.1-P	Field mustard	nucleus	46.59	40.85
CDX96033	Canola	nucleus	46.59	40.85
CDY69488	Canola	nucleus	45.38	40.79
Solyc03g119370.1.1	Tomato	nucleus	45.78	40.71
CDY54094	Canola	nucleus	46.59	40.7
CDY12705	Canola	nucleus	46.59	40.7
CDY01906	Canola	nucleus	46.59	40.7
Bra033948.1-P	Field mustard	nucleus	46.59	40.7
GSMUA_Achr8P10800_001	Banana	nucleus	41.77	40.62
PGSC0003DMT400014383	Potato	nucleus	44.98	40.29
AT1G68320.1	Thale cress	nucleus	46.18	40.21
CDY69953	Canola	nucleus	45.38	40.07
Zm00001d040019_P001	Maize	nucleus	58.23	40.06
Bra012482.1-P	Field mustard	nucleus	45.38	39.79
Zm00001d008528_P001	Maize	nucleus	57.83	39.78
Bra004041.1-P	Field mustard	nucleus	44.98	39.72
CDY03859	Canola	nucleus	45.38	39.37
CDY42115	Canola	nucleus	43.78	39.35
GSMUA_AchrUn_...	Banana	nucleus	42.17	39.33
GSMUA_Achr9P16640_001	Banana	nucleus	40.96	39.23
HORVU3Hr1G004050.1	Barley	nucleus	55.02	39.03
TraesCS3A01G044700.1	Wheat	nucleus	54.22	39.02
GSMUA_Achr11P...	Banana	nucleus	41.37	39.02
TraesCS3D01G036200.1	Wheat	nucleus	53.82	38.95
KRH41648	Soybean	nucleus	48.59	38.78
CDX84981	Canola	nucleus	44.58	38.54
GSMUA_Achr1P24960_001	Banana	nucleus	41.77	38.52
TraesCS3B01G039100.1	Wheat	nucleus	54.22	38.46
EES00381	Sorghum	nucleus	59.84	38.3
KRH60346	Soybean	nucleus	48.59	38.17
Bra024760.1-P	Field mustard	nucleus	40.16	37.59
GSMUA_AchrUn_...	Banana	nucleus	41.37	37.45
GSMUA_Achr8P29910_001	Banana	nucleus	40.16	37.17
GSMUA_AchrUn_...	Banana	nucleus	41.77	37.01
GSMUA_Achr7P05570_001	Banana	nucleus	40.16	36.76
GSMUA_Achr6P15370_001	Banana	nucleus	29.72	35.41
KRH48497	Soybean	nucleus	43.78	35.05
GSMUA_Achr4P29230_001	Banana	nucleus	28.51	34.8
GSMUA_Achr2P16200_001	Banana	nucleus	28.51	34.63
GSMUA_Achr10P...	Banana	nucleus	29.32	34.43
AT1G25340.3	Thale cress	nucleus	42.57	34.42
GSMUA_Achr11P...	Banana	nucleus	29.32	34.27
GSMUA_Achr9P28370_001	Banana	nucleus	29.32	34.11
KRH39173	Soybean	nucleus	41.37	33.23
GSMUA_Achr3P08370_001	Banana	nucleus	37.75	32.75
GSMUA_Achr10P...	Banana	nucleus	29.72	32.74
GSMUA_Achr11P...	Banana	nucleus	30.12	32.61
GSMUA_Achr8P12710_001	Banana	nucleus	29.72	32.03
GSMUA_Achr10P...	Banana	nucleus	30.12	31.78
GSMUA_Achr8P02640_001	Banana	nucleus	30.12	31.78
GSMUA_Achr5P28350_001	Banana	nucleus	30.12	31.65
GSMUA_Achr11P...	Banana	nucleus	30.12	31.12
GSMUA_Achr11P...	Banana	nucleus	42.97	31.1
GSMUA_Achr1P03450_001	Banana	nucleus	30.12	30.86
GSMUA_Achr7P18200_001	Banana	nucleus	29.72	30.71
GSMUA_Achr8P34340_001	Banana	nucleus	28.51	28.98
GSMUA_Achr9P07000_001	Banana	nucleus	38.96	7.72

Protein Annotations

EnsemblPlants:GSMUA_Achr8P18460_001	EnsemblPlants:GSMUA_Achr8T18460_001	EnsemblPlantsGene:GSMUA_Achr8G18460_001	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF510	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI000296D5E1	UniProt:M0TRJ9	MapMan:15.5.2.1	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G18460_001]

Coordinates

chr8:+:22616986..22617944

Molecular Weight (calculated)

28413.5 Da

IEP (calculated)

6.922

GRAVY (calculated)

-0.594

Length

249 amino acids

Sequence
(BLAST)

001: MEVRRGPWTL EEDTLLTHYI ACHGEGRWNL LARCSGLKRT GKSCRLRWLN YLKPDIKRGN LSQEEQLLIL ELHSKWGNRW SRIAQHLPGR TDNEIKNYWR
101: TRVQKQARQM KVDANSTMFR DALRCHWTPR LLEKIGSSQT MQNPVANTNA PTTDQAQLTS CSTVLPQVPV AMSDPNSVTL DQFSSIISSM NNAYDLDAWG
201: LTPMPASDHH TVANNDCSSD VGDDLWCVDE LHDMFKSYLS GAETEFPFC

Best Arabidopsis Sequence Match ( AT1G68320.1 )
(BLAST)

001: MENSMKKKKS FKESEDEELR RGPWTLEEDT LLTNYILHNG EGRWNHVAKC AGLKRTGKSC RLRWLNYLKP DIRRGNLTPQ EQLLILELHS KWGNRWSKIA
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE

Arabidopsis Description

MYB62Transcription factor MYB62 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9G7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.