Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH41648 | Soybean | nucleus | 92.74 | 94.23 |
| GSMUA_Achr3P01370_001 | Banana | nucleus | 30.6 | 78.23 |
| KRG94092 | Soybean | nucleus | 18.61 | 66.29 |
| GSMUA_Achr10P... | Banana | nucleus | 33.75 | 61.14 |
| KRH62917 | Soybean | nucleus | 19.87 | 60.58 |
| KRH33348 | Soybean | nucleus | 19.24 | 59.8 |
| KRH55348 | Soybean | nucleus | 23.34 | 59.68 |
| KRH11843 | Soybean | nucleus | 23.03 | 58.87 |
| GSMUA_Achr1P21020_001 | Banana | nucleus | 34.7 | 56.41 |
| KRH75688 | Soybean | nucleus | 18.3 | 53.7 |
| GSMUA_Achr8P18460_001 | Banana | nucleus | 38.17 | 48.59 |
| KRH56587 | Soybean | nucleus | 29.97 | 46.12 |
| KRH48497 | Soybean | nucleus | 45.11 | 45.98 |
| KRH07188 | Soybean | nucleus | 29.97 | 45.67 |
| KRG94086 | Soybean | nucleus | 29.65 | 45.63 |
| KRG93265 | Soybean | nucleus | 29.34 | 45.37 |
| KRH18107 | Soybean | nucleus | 17.98 | 45.24 |
| VIT_17s0000g03560.t01 | Wine grape | nucleus | 45.74 | 44.21 |
| GSMUA_Achr2P22640_001 | Banana | nucleus | 40.69 | 44.18 |
| KRH39173 | Soybean | nucleus | 42.59 | 43.55 |
| KRG90844 | Soybean | nucleus | 41.96 | 43.32 |
| KRH35934 | Soybean | nucleus | 41.96 | 43.18 |
| KRH31759 | Soybean | nucleus | 31.23 | 41.95 |
| KRH68299 | Soybean | nucleus | 30.91 | 41.35 |
| GSMUA_Achr3P21060_001 | Banana | nucleus | 39.43 | 41.25 |
| KRG96563 | Soybean | nucleus | 30.91 | 41.18 |
| GSMUA_Achr6P09760_001 | Banana | nucleus | 39.75 | 40.91 |
| GSMUA_Achr11P... | Banana | nucleus | 39.12 | 39.37 |
| KRH69178 | Soybean | nucleus | 31.86 | 38.85 |
| KRH68301 | Soybean | nucleus | 32.18 | 38.35 |
| Zm00001d040019_P001 | Maize | nucleus | 43.22 | 37.85 |
| KRG96561 | Soybean | nucleus | 29.97 | 36.54 |
| KRH31760 | Soybean | nucleus | 32.49 | 36.52 |
| TraesCS3D01G036200.1 | Wheat | nucleus | 39.43 | 36.34 |
| TraesCS3A01G044700.1 | Wheat | nucleus | 39.43 | 36.13 |
| KRH02414 | Soybean | nucleus | 36.59 | 36.02 |
| Os01t0128000-01 | Rice | nucleus | 39.75 | 36.0 |
| Zm00001d008528_P001 | Maize | nucleus | 41.01 | 35.91 |
| TraesCS3B01G039100.1 | Wheat | nucleus | 39.75 | 35.9 |
| KRH50671 | Soybean | nucleus | 36.59 | 35.69 |
| HORVU3Hr1G004050.1 | Barley | nucleus | 39.12 | 35.33 |
| KRG92245 | Soybean | nucleus | 27.76 | 34.65 |
| KRH49797 | Soybean | nucleus | 15.77 | 34.48 |
| KRH34553 | Soybean | nucleus | 28.71 | 34.21 |
| EES00381 | Sorghum | nucleus | 41.96 | 34.19 |
| KRH04452 | Soybean | nucleus | 28.39 | 33.96 |
| KRG90311 | Soybean | nucleus | 27.76 | 33.85 |
| KRH36928 | Soybean | nucleus | 36.28 | 33.82 |
| KRG97314 | Soybean | nucleus | 36.28 | 33.72 |
| KRH10298 | Soybean | nucleus | 26.5 | 32.94 |
| KRH23019 | Soybean | nucleus | 26.81 | 32.2 |
| KRH24842 | Soybean | nucleus | 26.81 | 31.95 |
| KRH29850 | Soybean | nucleus | 26.81 | 31.95 |
| KRH01379 | Soybean | nucleus | 25.55 | 31.4 |
| KRH45095 | Soybean | nucleus | 25.24 | 29.09 |
| KRH01378 | Soybean | nucleus | 25.24 | 28.67 |
| KRH33568 | Soybean | nucleus | 28.71 | 28.44 |
| KRH19953 | Soybean | nucleus | 20.5 | 28.38 |
| KRH32555 | Soybean | nucleus | 20.19 | 27.59 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:778042 | EMBL:ACUP02003363 | EMBL:DQ822898 | EnsemblPlantsGene:GLYMA_05G234600 |
| GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 |
| GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | EnsemblPlants:KRH60346 | ProteinID:KRH60346 |
| ProteinID:KRH60346.1 | EMBL:KT921222 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF510 | UniProt:Q0PJK4 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0000DBD8A6 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:41164261..41166233
Molecular Weight (calculated)
36522.4 Da
IEP (calculated)
7.943
GRAVY (calculated)
-0.939
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTSKSVSSS SEDDNELRRG PWTLEEDNLL SQYISSHGEG RWNLLAKRSG LKRTGKSCRL RWLNYLKPDV KRGNLTPQEQ LIILELHSKW GNRWSKIAQN
101: LPGRTDNEIK NYWRTRIQKQ ARHLKIDTDS REFQELVRRF WMPRLLQKAK ESSSSAMSIQ NQATPMPFDG VSQHSTVGTI PSHSHTPWQG PCMNEAGPTY
201: MDQHEQNSDS EHNNGSCISL SESANFPKVP QHFGRTTITQ YHALNNNDFG TFTYDGYNVS NNVYEMDNFK TPTTRVAEDA QYPTGDCQMV GSNWVNSDFA
301: CNMWNMDELW QFSKLQK
101: LPGRTDNEIK NYWRTRIQKQ ARHLKIDTDS REFQELVRRF WMPRLLQKAK ESSSSAMSIQ NQATPMPFDG VSQHSTVGTI PSHSHTPWQG PCMNEAGPTY
201: MDQHEQNSDS EHNNGSCISL SESANFPKVP QHFGRTTITQ YHALNNNDFG TFTYDGYNVS NNVYEMDNFK TPTTRVAEDA QYPTGDCQMV GSNWVNSDFA
301: CNMWNMDELW QFSKLQK
001: MSNITKKKCN GNEEGAEQRK GPWTLEEDTL LTNYISHNGE GRWNLLAKSS GLKRAGKSCR LRWLNYLKPD IKRGNLTPQE QLLILELHSK WGNRWSKISK
101: YLPGRTDNDI KNYWRTRVQK QARQLNIDSN SHKFIEVVRS FWFPRLINEI KDNSYTNNIK ANAPDLLGPI LRDSKDLGFN NMDCSTSMSE DLKKTSQFMD
201: FSDLETTMSL EGSRGGSSQC VSEVYSSFPC LEEEYMVAVM GSSDISALHD CHVADSKYED DVTQDLMWNM DDIWQFNEYA HFN
101: YLPGRTDNDI KNYWRTRVQK QARQLNIDSN SHKFIEVVRS FWFPRLINEI KDNSYTNNIK ANAPDLLGPI LRDSKDLGFN NMDCSTSMSE DLKKTSQFMD
201: FSDLETTMSL EGSRGGSSQC VSEVYSSFPC LEEEYMVAVM GSSDISALHD CHVADSKYED DVTQDLMWNM DDIWQFNEYA HFN
Arabidopsis Description
MYB116myb domain protein 116 [Source:TAIR;Acc:AT1G25340]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.