Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH32555 | Soybean | nucleus | 92.14 | 90.95 |
| VIT_08s0007g04830.t01 | Wine grape | nucleus | 38.43 | 71.54 |
| Solyc09g008390.1.1 | Tomato | nucleus | 34.5 | 60.31 |
| PGSC0003DMT400072687 | Potato | nucleus | 34.06 | 57.35 |
| KRH62917 | Soybean | nucleus | 23.58 | 51.92 |
| KRH55348 | Soybean | nucleus | 27.51 | 50.81 |
| KRH11843 | Soybean | nucleus | 27.07 | 50.0 |
| KRH33348 | Soybean | nucleus | 22.27 | 50.0 |
| Solyc10g083900.1.1 | Tomato | nucleus | 43.23 | 49.5 |
| KRG94092 | Soybean | nucleus | 18.34 | 47.19 |
| KRH75688 | Soybean | nucleus | 21.83 | 46.3 |
| AT3G53200.1 | Thale cress | nucleus | 45.85 | 44.12 |
| Bra028550.1-P | Field mustard | nucleus | 44.54 | 42.5 |
| CDY13311 | Canola | nucleus | 44.1 | 41.39 |
| CDX67561 | Canola | nucleus | 43.23 | 41.25 |
| CDX73572 | Canola | nucleus | 43.67 | 40.82 |
| Bra006977.1-P | Field mustard | nucleus | 43.23 | 40.41 |
| CDX78153 | Canola | nucleus | 43.23 | 40.41 |
| KRH18107 | Soybean | nucleus | 20.52 | 37.3 |
| KRH10298 | Soybean | nucleus | 36.24 | 32.55 |
| KRG94086 | Soybean | nucleus | 29.26 | 32.52 |
| KRH07188 | Soybean | nucleus | 29.26 | 32.21 |
| KRG93265 | Soybean | nucleus | 28.38 | 31.71 |
| KRH56587 | Soybean | nucleus | 27.95 | 31.07 |
| KRH23019 | Soybean | nucleus | 35.81 | 31.06 |
| KRG96563 | Soybean | nucleus | 31.0 | 29.83 |
| KRH29850 | Soybean | nucleus | 34.5 | 29.7 |
| KRH24842 | Soybean | nucleus | 33.62 | 28.95 |
| KRH31759 | Soybean | nucleus | 29.26 | 28.39 |
| KRG92245 | Soybean | nucleus | 31.0 | 27.95 |
| KRH68299 | Soybean | nucleus | 28.38 | 27.43 |
| KRH34553 | Soybean | nucleus | 31.44 | 27.07 |
| KRG90311 | Soybean | nucleus | 30.57 | 26.92 |
| KRH04452 | Soybean | nucleus | 30.57 | 26.42 |
| KRH68301 | Soybean | nucleus | 30.57 | 26.32 |
| KRH45095 | Soybean | nucleus | 31.44 | 26.18 |
| KRH69178 | Soybean | nucleus | 29.69 | 26.15 |
| KRG96561 | Soybean | nucleus | 29.69 | 26.15 |
| KRH01379 | Soybean | nucleus | 29.26 | 25.97 |
| KRH01378 | Soybean | nucleus | 31.44 | 25.81 |
| KRG90844 | Soybean | nucleus | 31.88 | 23.78 |
| KRH31760 | Soybean | nucleus | 29.26 | 23.76 |
| KRH35934 | Soybean | nucleus | 31.88 | 23.7 |
| KRH48497 | Soybean | nucleus | 31.44 | 23.15 |
| KRH39173 | Soybean | nucleus | 31.0 | 22.9 |
| KRH33568 | Soybean | nucleus | 31.0 | 22.19 |
| KRH50671 | Soybean | nucleus | 30.57 | 21.54 |
| KRH02414 | Soybean | nucleus | 30.13 | 21.43 |
| KRH36928 | Soybean | nucleus | 31.44 | 21.18 |
| KRG97314 | Soybean | nucleus | 31.44 | 21.11 |
| KRH41648 | Soybean | nucleus | 28.38 | 20.83 |
| KRH60346 | Soybean | nucleus | 28.38 | 20.5 |
| KRH49797 | Soybean | nucleus | 12.66 | 20.0 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100814530 | MapMan:15.5.2.1 | EMBL:ACUP02008218 | EnsemblPlantsGene:GLYMA_13G145800 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:K7LZS8 | EnsemblPlants:KRH19953 | ProteinID:KRH19953 |
| ProteinID:KRH19953.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF636 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000233CEE9 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr13:+:25883989..25885650
Molecular Weight (calculated)
26876.1 Da
IEP (calculated)
5.074
GRAVY (calculated)
-1.072
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MQGENLRKGT WLQEEDEQLT SFVARLGERR WDSLAKVAGL KRSGKSCRLR WMNYLRPNLK HGHFSVEEEQ LIVQLQQELG NKWAKIARKL PGRTDNEIKN
101: YWKTHLRKRA QAQQGDFKYK LEIATQEVNQ KSIDMDSKNC KHGNVWCQDS EWETKDSSST DTLSLSDWEL RSSPYETRIL DWIAELQNGY GENELEQDCN
201: STGTCNYYPQ EFDEGCDSWD YSGSLWDMN
101: YWKTHLRKRA QAQQGDFKYK LEIATQEVNQ KSIDMDSKNC KHGNVWCQDS EWETKDSSST DTLSLSDWEL RSSPYETRIL DWIAELQNGY GENELEQDCN
201: STGTCNYYPQ EFDEGCDSWD YSGSLWDMN
001: MDFKKEETLR RGPWLEEEDE RLVKVISLLG ERRWDSLAIV SGLKRSGKSC RLRWMNYLNP TLKRGPMSQE EERIIFQLHA LWGNKWSKIA RRLPGRTDNE
101: IKNYWRTHYR KKQEAQNYGK LFEWRGNTGE ELLHKYKETE ITRTKTTSQE HGFVEVVSME SGKEANGGVG GRESFGVMKS PYENRISDWI SEISTDQSEA
201: NLSEDHSSNS CSENNINIGT WWFQETRDFE EFSCSLWS
101: IKNYWRTHYR KKQEAQNYGK LFEWRGNTGE ELLHKYKETE ITRTKTTSQE HGFVEVVSME SGKEANGGVG GRESFGVMKS PYENRISDWI SEISTDQSEA
201: NLSEDHSSNS CSENNINIGT WWFQETRDFE EFSCSLWS
Arabidopsis Description
MYB27Transcription factor MYB27 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCP1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.