Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH18107 | Soybean | nucleus | 43.64 | 81.75 |
| KRH49797 | Soybean | nucleus | 45.76 | 74.48 |
| KRG94092 | Soybean | nucleus | 25.42 | 67.42 |
| KRH55348 | Soybean | nucleus | 31.36 | 59.68 |
| KRH11843 | Soybean | nucleus | 30.93 | 58.87 |
| KRH62917 | Soybean | nucleus | 25.42 | 57.69 |
| KRH33348 | Soybean | nucleus | 24.58 | 56.86 |
| KRH68299 | Soybean | nucleus | 56.36 | 56.12 |
| KRH75688 | Soybean | nucleus | 25.42 | 55.56 |
| KRG96563 | Soybean | nucleus | 55.08 | 54.62 |
| KRG96561 | Soybean | nucleus | 57.63 | 52.31 |
| KRH68301 | Soybean | nucleus | 58.9 | 52.26 |
| KRH69178 | Soybean | nucleus | 57.2 | 51.92 |
| VIT_07s0005g01950.t01 | Wine grape | nucleus | 55.08 | 47.79 |
| KRH31760 | Soybean | nucleus | 56.36 | 47.16 |
| KRG94086 | Soybean | nucleus | 37.71 | 43.2 |
| KRH07188 | Soybean | nucleus | 37.71 | 42.79 |
| KRG93265 | Soybean | nucleus | 36.86 | 42.44 |
| KRH56587 | Soybean | nucleus | 36.86 | 42.23 |
| KRH02414 | Soybean | nucleus | 53.39 | 39.13 |
| KRH50671 | Soybean | nucleus | 53.39 | 38.77 |
| KRG97314 | Soybean | nucleus | 52.97 | 36.66 |
| KRH36928 | Soybean | nucleus | 52.12 | 36.18 |
| KRG90844 | Soybean | nucleus | 44.49 | 34.2 |
| KRG92245 | Soybean | nucleus | 36.02 | 33.46 |
| KRH35934 | Soybean | nucleus | 43.64 | 33.44 |
| KRG90311 | Soybean | nucleus | 36.44 | 33.08 |
| KRH04452 | Soybean | nucleus | 36.02 | 32.08 |
| KRH34553 | Soybean | nucleus | 36.02 | 31.95 |
| KRH60346 | Soybean | nucleus | 41.95 | 31.23 |
| KRH41648 | Soybean | nucleus | 41.1 | 31.09 |
| KRH48497 | Soybean | nucleus | 39.83 | 30.23 |
| KRH39173 | Soybean | nucleus | 39.41 | 30.0 |
| KRH19953 | Soybean | nucleus | 28.39 | 29.26 |
| KRH01379 | Soybean | nucleus | 31.78 | 29.07 |
| KRH24842 | Soybean | nucleus | 31.78 | 28.2 |
| KRH32555 | Soybean | nucleus | 27.54 | 28.02 |
| KRH10298 | Soybean | nucleus | 30.08 | 27.84 |
| KRH29850 | Soybean | nucleus | 31.36 | 27.82 |
| KRH23019 | Soybean | nucleus | 30.51 | 27.27 |
| KRH33568 | Soybean | nucleus | 36.44 | 26.88 |
| KRH01378 | Soybean | nucleus | 30.51 | 25.81 |
| KRH45095 | Soybean | nucleus | 29.24 | 25.09 |
| HORVU5Hr1G022710.1 | Barley | cytosol, nucleus | 1.69 | 5.8 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:778065 | EMBL:ACUP02006084 | EnsemblPlantsGene:GLYMA_10G010300 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | UniProt:I1L7M3 | InterPro:IPR017930 | EnsemblPlants:KRH31759 | ProteinID:KRH31759 |
| ProteinID:KRH31759.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF743 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0001D83F03 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr10:+:976000..977159
Molecular Weight (calculated)
27284.7 Da
IEP (calculated)
9.667
GRAVY (calculated)
-0.694
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVKKGGSVV QAQVKLQKHN EKEMGMRKGP WAVEEDTILV NYIATHGEGH WNSVARCAGL RRSGKSCRLR WLNYLRPDVR RGNITLQEQI LILDLHSRWG
101: NRWSKIAQQL PGRTDNEIKN YWRTRVIKQA KQLKCDVNSK QFRDTLRYVW MPRLLERLQP TSQALEPNQS GLVLHASSSL LPSNSDHSIE RGSDLWPGFN
201: NQMLLEQGSG GDLLESLWDD DNMCFLQQLS YDLQMK
101: NRWSKIAQQL PGRTDNEIKN YWRTRVIKQA KQLKCDVNSK QFRDTLRYVW MPRLLERLQP TSQALEPNQS GLVLHASSSL LPSNSDHSIE RGSDLWPGFN
201: NQMLLEQGSG GDLLESLWDD DNMCFLQQLS YDLQMK
001: MGDKGRSLKI NKNMEEFTKV EEEMDVRRGP WTVEEDLELI NYIASHGEGR WNSLARCAEL KRTGKSCRLR WLNYLRPDVR RGNITLEEQL LILELHTRWG
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLKCDVNSQ QFKDTMKYLW MPRLVERIQA ASIGSVSMSS CVTTSSDQFV INNNNTNNVD NLALMSNPNG
201: YITPDNSSVA VSPVSDLTEC QVSSEVWKIG QDENLVDPKM TSPNYMDNSS GLLNGDFTKM QDQSDLNWFE NINGMVPNYS DSFWNIGNDE DFWLLQQHQQ
301: VHDNGSF
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLKCDVNSQ QFKDTMKYLW MPRLVERIQA ASIGSVSMSS CVTTSSDQFV INNNNTNNVD NLALMSNPNG
201: YITPDNSSVA VSPVSDLTEC QVSSEVWKIG QDENLVDPKM TSPNYMDNSS GLLNGDFTKM QDQSDLNWFE NINGMVPNYS DSFWNIGNDE DFWLLQQHQQ
301: VHDNGSF
Arabidopsis Description
AtMYB78myb domain protein 78 [Source:TAIR;Acc:AT5G49620]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.