Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69953 | Canola | nucleus | 98.92 | 97.16 |
| Bra004041.1-P | Field mustard | nucleus | 98.19 | 96.45 |
| CDY01906 | Canola | nucleus | 87.0 | 84.56 |
| CDX96033 | Canola | nucleus | 86.64 | 84.51 |
| CDY12705 | Canola | nucleus | 86.64 | 84.21 |
| CDY54094 | Canola | nucleus | 85.2 | 82.81 |
| AT1G68320.1 | Thale cress | nucleus | 83.39 | 80.77 |
| GSMUA_Achr3P01370_001 | Banana | nucleus | 33.21 | 74.19 |
| CDY58599 | Canola | nucleus | 26.35 | 68.87 |
| CDY42115 | Canola | nucleus | 62.09 | 62.09 |
| CDY03859 | Canola | nucleus | 62.45 | 60.28 |
| CDX84981 | Canola | nucleus | 62.09 | 59.72 |
| GSMUA_Achr10P... | Banana | nucleus | 36.1 | 57.14 |
| CDX85422 | Canola | nucleus | 36.46 | 55.19 |
| CDX86220 | Canola | nucleus | 36.46 | 52.33 |
| GSMUA_Achr1P21020_001 | Banana | nucleus | 36.82 | 52.31 |
| GSMUA_Achr8P18460_001 | Banana | nucleus | 40.79 | 45.38 |
| Solyc03g119370.1.1 | Tomato | nucleus | 45.49 | 45.0 |
| PGSC0003DMT400014383 | Potato | nucleus | 44.4 | 44.24 |
| VIT_01s0011g03730.t01 | Wine grape | nucleus | 45.85 | 44.1 |
| CDY37512 | Canola | nucleus | 31.77 | 43.78 |
| CDY00146 | Canola | nucleus | 25.99 | 43.37 |
| KRG90844 | Soybean | nucleus | 47.65 | 43.0 |
| CDY49063 | Canola | nucleus | 32.13 | 43.0 |
| CDX95420 | Canola | nucleus | 35.38 | 42.24 |
| KRH35934 | Soybean | nucleus | 46.93 | 42.21 |
| CDX91944 | Canola | nucleus | 30.69 | 41.06 |
| CDX74303 | Canola | nucleus | 30.32 | 40.38 |
| CDY44433 | Canola | nucleus | 33.57 | 40.09 |
| CDX86471 | Canola | nucleus | 33.57 | 40.09 |
| CDY20036 | Canola | nucleus | 33.57 | 40.09 |
| GSMUA_Achr3P21060_001 | Banana | nucleus | 43.68 | 39.93 |
| GSMUA_Achr2P22640_001 | Banana | nucleus | 40.79 | 38.7 |
| GSMUA_Achr6P09760_001 | Banana | nucleus | 42.96 | 38.64 |
| CDY27504 | Canola | nucleus | 36.46 | 37.13 |
| CDY58600 | Canola | nucleus | 42.96 | 36.84 |
| GSMUA_Achr11P... | Banana | nucleus | 41.52 | 36.51 |
| CDX80085 | Canola | nucleus | 25.99 | 36.18 |
| Os01t0128000-01 | Rice | nucleus | 44.04 | 34.86 |
| Zm00001d040019_P001 | Maize | nucleus | 45.13 | 34.53 |
| TraesCS3D01G036200.1 | Wheat | nucleus | 42.24 | 34.01 |
| Zm00001d008528_P001 | Maize | nucleus | 44.4 | 33.98 |
| CDY05611 | Canola | nucleus | 38.99 | 33.96 |
| CDY33891 | Canola | nucleus | 38.99 | 33.96 |
| CDY70097 | Canola | nucleus | 28.88 | 33.9 |
| CDX77436 | Canola | nucleus | 31.77 | 33.85 |
| TraesCS3A01G044700.1 | Wheat | nucleus | 42.24 | 33.81 |
| CDY49581 | Canola | nucleus | 28.88 | 33.76 |
| CDY24688 | Canola | nucleus | 38.63 | 33.54 |
| CDY05270 | Canola | nucleus | 38.99 | 33.54 |
| CDX99864 | Canola | nucleus | 38.63 | 33.44 |
| CDY34949 | Canola | nucleus | 38.63 | 33.44 |
| HORVU3Hr1G004050.1 | Barley | nucleus | 42.24 | 33.33 |
| CDX80230 | Canola | nucleus | 28.52 | 33.33 |
| TraesCS3B01G039100.1 | Wheat | nucleus | 42.24 | 33.33 |
| CDY61190 | Canola | nucleus | 31.05 | 32.95 |
| CDY49231 | Canola | nucleus | 31.77 | 32.84 |
| CDX71075 | Canola | nucleus | 28.52 | 32.78 |
| CDX88722 | Canola | nucleus | 28.52 | 32.64 |
| CDX94829 | Canola | nucleus | 31.41 | 31.87 |
| CDY64694 | Canola | nucleus | 31.41 | 31.75 |
| CDX93006 | Canola | nucleus | 31.41 | 31.75 |
| EES00381 | Sorghum | nucleus | 44.4 | 31.62 |
| CDY45895 | Canola | nucleus | 28.16 | 30.35 |
| CDY70282 | Canola | nucleus | 31.41 | 29.59 |
| CDY00083 | Canola | nucleus | 28.52 | 29.26 |
| CDY19978 | Canola | nucleus | 28.16 | 29.21 |
| CDX86041 | Canola | nucleus | 29.24 | 29.14 |
| CDX99125 | Canola | nucleus | 29.24 | 29.14 |
| CDX86354 | Canola | nucleus | 28.16 | 29.1 |
| CDX85285 | Canola | nucleus | 28.16 | 28.89 |
| CDX86040 | Canola | nucleus | 28.88 | 28.78 |
| CDX73572 | Canola | nucleus | 24.55 | 27.76 |
| CDX67561 | Canola | nucleus | 23.83 | 27.5 |
| CDY13311 | Canola | nucleus | 24.19 | 27.46 |
| CDX78153 | Canola | nucleus | 23.83 | 26.94 |
| CDX74100 | Canola | nucleus | 29.96 | 24.63 |
| CDY35782 | Canola | nucleus | 16.61 | 22.44 |
| CDX86221 | Canola | nucleus | 2.89 | 11.43 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078JPI3 | UniProt:A0A078JPI3 | EnsemblPlants:CDY69488 | ProteinID:CDY69488 |
| ProteinID:CDY69488.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00088169001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF510 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EE5E65 | SEG:seg |
Description
BnaCnng63810DBnaCnng63810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JPI3]
Coordinates
chrLK039550:-:725..1745
Molecular Weight (calculated)
32179.6 Da
IEP (calculated)
4.941
GRAVY (calculated)
-0.849
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDSMKTKSF KESEEVGLRR GPWTLEEDTL LTNYILHNGE GRWNLVAKSA GLKRNGKSCR LRWLNYLKPD IRRGNLTPQE QLLILELHSK WGNRWSKIAQ
101: YLPGRTDNEI KNYWRTRVQK QARQLNIESN SDKFFDAVRS FWVPRLIEKM EQNSFTNCCP QNNNNKSLLP PQSYDSTSTQ TYTDISSQNP GLSNIDGSSS
201: SSIFMPDLTT NPHFIDPNTI IDGSMCNQEL GGYIPEMEEY YYMGNSDIGT ECHVAEAYED VTQDPMWNMD DIWQFRE
101: YLPGRTDNEI KNYWRTRVQK QARQLNIESN SDKFFDAVRS FWVPRLIEKM EQNSFTNCCP QNNNNKSLLP PQSYDSTSTQ TYTDISSQNP GLSNIDGSSS
201: SSIFMPDLTT NPHFIDPNTI IDGSMCNQEL GGYIPEMEEY YYMGNSDIGT ECHVAEAYED VTQDPMWNMD DIWQFRE
001: MSNITKKKCN GNEEGAEQRK GPWTLEEDTL LTNYISHNGE GRWNLLAKSS GLKRAGKSCR LRWLNYLKPD IKRGNLTPQE QLLILELHSK WGNRWSKISK
101: YLPGRTDNDI KNYWRTRVQK QARQLNIDSN SHKFIEVVRS FWFPRLINEI KDNSYTNNIK ANAPDLLGPI LRDSKDLGFN NMDCSTSMSE DLKKTSQFMD
201: FSDLETTMSL EGSRGGSSQC VSEVYSSFPC LEEEYMVAVM GSSDISALHD CHVADSKYED DVTQDLMWNM DDIWQFNEYA HFN
101: YLPGRTDNDI KNYWRTRVQK QARQLNIDSN SHKFIEVVRS FWFPRLINEI KDNSYTNNIK ANAPDLLGPI LRDSKDLGFN NMDCSTSMSE DLKKTSQFMD
201: FSDLETTMSL EGSRGGSSQC VSEVYSSFPC LEEEYMVAVM GSSDISALHD CHVADSKYED DVTQDLMWNM DDIWQFNEYA HFN
Arabidopsis Description
MYB116myb domain protein 116 [Source:TAIR;Acc:AT1G25340]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.