Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69953 | Canola | nucleus | 98.58 | 98.58 |
| CDY69488 | Canola | nucleus | 96.45 | 98.19 |
| Bra033948.1-P | Field mustard | nucleus | 86.52 | 85.61 |
| Bra004297.1-P | Field mustard | nucleus | 85.11 | 84.51 |
| AT1G68320.1 | Thale cress | nucleus | 82.62 | 81.47 |
| GSMUA_Achr3P01370_001 | Banana | nucleus | 31.91 | 72.58 |
| Bra012482.1-P | Field mustard | nucleus | 61.7 | 61.27 |
| Bra024760.1-P | Field mustard | nucleus | 56.74 | 60.15 |
| GSMUA_Achr10P... | Banana | nucleus | 34.75 | 56.0 |
| GSMUA_Achr1P21020_001 | Banana | nucleus | 35.46 | 51.28 |
| GSMUA_Achr8P18460_001 | Banana | nucleus | 39.72 | 44.98 |
| Solyc03g119370.1.1 | Tomato | nucleus | 44.33 | 44.64 |
| VIT_01s0011g03730.t01 | Wine grape | nucleus | 45.39 | 44.44 |
| PGSC0003DMT400014383 | Potato | nucleus | 43.26 | 43.88 |
| KRG90844 | Soybean | nucleus | 46.81 | 43.0 |
| Bra039108.1-P | Field mustard | nucleus | 30.85 | 42.44 |
| KRH35934 | Soybean | nucleus | 46.1 | 42.21 |
| Bra001005.1-P | Field mustard | nucleus | 29.79 | 40.38 |
| Bra039067.1-P | Field mustard | nucleus | 32.62 | 39.66 |
| Bra025300.1-P | Field mustard | nucleus | 32.62 | 39.66 |
| GSMUA_Achr3P21060_001 | Banana | nucleus | 42.2 | 39.27 |
| Bra004473.1-P | Field mustard | nucleus | 37.59 | 38.55 |
| GSMUA_Achr2P22640_001 | Banana | nucleus | 39.72 | 38.36 |
| GSMUA_Achr6P09760_001 | Banana | nucleus | 41.49 | 37.99 |
| Bra021389.1-P | Field mustard | nucleus | 35.82 | 37.13 |
| GSMUA_Achr11P... | Banana | nucleus | 40.43 | 36.19 |
| Bra001202.1-P | Field mustard | nucleus | 38.3 | 35.53 |
| Os01t0128000-01 | Rice | nucleus | 42.91 | 34.57 |
| Bra020289.1-P | Field mustard | nucleus | 28.72 | 34.32 |
| Zm00001d040019_P001 | Maize | nucleus | 43.97 | 34.25 |
| Bra002533.1-P | Field mustard | nucleus | 28.72 | 34.18 |
| Bra020624.1-P | Field mustard | nucleus | 38.3 | 33.96 |
| Bra010022.1-P | Field mustard | nucleus | 38.65 | 33.75 |
| Bra010021.1-P | Field mustard | nucleus | 38.65 | 33.75 |
| TraesCS3D01G036200.1 | Wheat | nucleus | 41.13 | 33.72 |
| Zm00001d008528_P001 | Maize | nucleus | 43.26 | 33.7 |
| TraesCS3A01G044700.1 | Wheat | nucleus | 41.13 | 33.53 |
| Bra006694.1-P | Field mustard | nucleus | 28.72 | 33.47 |
| Bra029582.1-P | Field mustard | nucleus | 37.94 | 33.23 |
| Bra040274.1-P | Field mustard | nucleus | 37.59 | 33.12 |
| TraesCS3B01G039100.1 | Wheat | nucleus | 41.13 | 33.05 |
| HORVU3Hr1G004050.1 | Barley | nucleus | 41.13 | 33.05 |
| Bra018223.1-P | Field mustard | nucleus | 29.08 | 32.54 |
| Bra015029.1-P | Field mustard | nucleus | 31.21 | 32.47 |
| Bra001941.1-P | Field mustard | nucleus | 30.85 | 31.75 |
| Bra028369.1-P | Field mustard | nucleus | 30.5 | 31.39 |
| EES00381 | Sorghum | nucleus | 43.26 | 31.36 |
| Bra020744.1-P | Field mustard | nucleus | 27.66 | 30.35 |
| Bra036202.1-P | Field mustard | nucleus | 27.66 | 29.21 |
| Bra025410.1-P | Field mustard | nucleus | 27.66 | 29.1 |
| Bra028550.1-P | Field mustard | nucleus | 24.11 | 28.33 |
| Bra006977.1-P | Field mustard | nucleus | 23.4 | 26.94 |
Protein Annotations
| EnsemblPlants:Bra004041.1 | EnsemblPlants:Bra004041.1-P | EnsemblPlantsGene:Bra004041 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF510 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000254130D | UniProt:M4CIK7 | MapMan:15.5.2.1 | : | : |
Description
AT1G68320 (E=6e-120) MYB62, AtMYB62, BW62B, BW62C | MYB62 (myb domain protein 62); DNA binding / transcription factor
Coordinates
chrA07:-:16482412..16483453
Molecular Weight (calculated)
32805.1 Da
IEP (calculated)
4.627
GRAVY (calculated)
-0.863
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDSMKTKSF EESEEVGLRR GPWTLEEDTL LTNYILHNGE GRWNLVAKSA GLKRNGKSCR LRWLNYLKPD IRRGNLTPQE QFLILELHSK WGNRWSKIAQ
101: YLPGRTDNEI KNYWRTRVQK QARQLNIESN SDKFFDAVRS FWVPRLIEKM EQNSFTNCCP QNNNNKSLLP PQSYDSTSTQ TYTDISSQNP GLSNIDGSSS
201: SSTFMPDLTT VPYFIDPNTI IDGSMCNQEG NYQELGGYIP EMEEYYYMGN SDIGTECHVA EAYEDVTQDP MWNMDDIWQF RE
101: YLPGRTDNEI KNYWRTRVQK QARQLNIESN SDKFFDAVRS FWVPRLIEKM EQNSFTNCCP QNNNNKSLLP PQSYDSTSTQ TYTDISSQNP GLSNIDGSSS
201: SSTFMPDLTT VPYFIDPNTI IDGSMCNQEG NYQELGGYIP EMEEYYYMGN SDIGTECHVA EAYEDVTQDP MWNMDDIWQF RE
001: MENSMKKKKS FKESEDEELR RGPWTLEEDT LLTNYILHNG EGRWNHVAKC AGLKRTGKSC RLRWLNYLKP DIRRGNLTPQ EQLLILELHS KWGNRWSKIA
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE
Arabidopsis Description
MYB62Transcription factor MYB62 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9G7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.