Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86471 | Canola | nucleus | 99.57 | 99.57 |
| CDY44433 | Canola | nucleus | 99.14 | 99.14 |
| AT3G27810.1 | Thale cress | nucleus | 88.36 | 90.71 |
| Bra039067.1-P | Field mustard | nucleus | 89.22 | 89.22 |
| KRG94092 | Soybean | nucleus | 32.76 | 85.39 |
| Solyc02g067760.2.1 | Tomato | nucleus | 58.62 | 69.74 |
| VIT_14s0066g01090.t01 | Wine grape | nucleus | 56.47 | 69.31 |
| KRH07188 | Soybean | nucleus | 61.21 | 68.27 |
| KRG94086 | Soybean | nucleus | 59.91 | 67.48 |
| KRH56587 | Soybean | nucleus | 59.05 | 66.5 |
| KRG93265 | Soybean | nucleus | 57.76 | 65.37 |
| PGSC0003DMT400001278 | Potato | nucleus | 56.47 | 63.28 |
| GSMUA_Achr1P27270_001 | Banana | nucleus | 47.84 | 56.63 |
| GSMUA_Achr6P27290_001 | Banana | nucleus | 46.98 | 55.9 |
| Bra039108.1-P | Field mustard | nucleus | 42.67 | 48.29 |
| Bra001005.1-P | Field mustard | nucleus | 42.24 | 47.12 |
| TraesCS1D01G415000.1 | Wheat | nucleus | 42.24 | 42.98 |
| HORVU3Hr1G056980.1 | Barley | nucleus | 37.5 | 41.04 |
| TraesCS1A01G406600.1 | Wheat | mitochondrion | 43.1 | 40.16 |
| TraesCS3A01G229500.1 | Wheat | nucleus | 36.21 | 40.0 |
| TraesCS3B01G258800.1 | Wheat | nucleus | 36.64 | 39.91 |
| TraesCS3D01G223700.1 | Wheat | nucleus | 36.64 | 39.72 |
| TraesCS1B01G436800.1 | Wheat | nucleus | 31.47 | 38.62 |
| Bra021389.1-P | Field mustard | nucleus | 41.38 | 35.29 |
| Zm00001d044107_P001 | Maize | nucleus | 40.09 | 35.23 |
| Bra012482.1-P | Field mustard | nucleus | 42.24 | 34.51 |
| HORVU1Hr1G089770.2 | Barley | nucleus | 43.53 | 34.47 |
| Bra004473.1-P | Field mustard | nucleus | 40.09 | 33.82 |
| Bra001202.1-P | Field mustard | nucleus | 43.1 | 32.89 |
| Bra004297.1-P | Field mustard | nucleus | 40.09 | 32.75 |
| Bra004041.1-P | Field mustard | nucleus | 39.66 | 32.62 |
| EES01143 | Sorghum | nucleus | 40.95 | 32.42 |
| Bra024760.1-P | Field mustard | nucleus | 37.07 | 32.33 |
| Bra020289.1-P | Field mustard | nucleus | 32.76 | 32.2 |
| Os01t0637800-00 | Rice | mitochondrion, nucleus, plastid | 37.93 | 31.65 |
| Bra033948.1-P | Field mustard | nucleus | 38.79 | 31.58 |
| Bra006694.1-P | Field mustard | nucleus | 32.33 | 30.99 |
| Bra020624.1-P | Field mustard | nucleus | 42.24 | 30.82 |
| Bra002533.1-P | Field mustard | nucleus | 31.47 | 30.8 |
| Bra010021.1-P | Field mustard | nucleus | 41.81 | 30.03 |
| Bra010022.1-P | Field mustard | nucleus | 41.81 | 30.03 |
| Bra040274.1-P | Field mustard | nucleus | 41.38 | 30.0 |
| Bra015029.1-P | Field mustard | nucleus | 34.91 | 29.89 |
| Bra018223.1-P | Field mustard | nucleus | 32.33 | 29.76 |
| Bra028369.1-P | Field mustard | nucleus | 34.91 | 29.56 |
| Bra029582.1-P | Field mustard | nucleus | 40.95 | 29.5 |
| Bra001941.1-P | Field mustard | nucleus | 34.48 | 29.2 |
| Bra036202.1-P | Field mustard | nucleus | 30.6 | 26.59 |
| Bra020744.1-P | Field mustard | nucleus | 29.31 | 26.46 |
| Bra028550.1-P | Field mustard | nucleus | 27.16 | 26.25 |
| Bra025410.1-P | Field mustard | nucleus | 30.17 | 26.12 |
| Bra006977.1-P | Field mustard | nucleus | 27.16 | 25.71 |
| GSMUA_Achr9P07000_001 | Banana | nucleus | 46.55 | 8.59 |
Protein Annotations
| EnsemblPlants:Bra025300.1 | EnsemblPlants:Bra025300.1-P | EnsemblPlantsGene:Bra025300 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF531 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000253FC38 | UniProt:M4E944 | MapMan:15.5.2.1 | : | : |
Description
AT3G27810 (E=2e-108) ATMYB21, ATMYB3, MYB21 | ATMYB21 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 21); DNA binding / transcription factor
Coordinates
chrA06:-:22299937..22302211
Molecular Weight (calculated)
25829.0 Da
IEP (calculated)
6.879
GRAVY (calculated)
-0.681
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKRGGICSG GSGSSGETEV RKGPWTMEED LILINYIANH GDGVWNTLAK SAGLKRTGKS CRLRWLNYLR PDVRRGNITP EEQLTIMELH AKWGNRWSKI
101: AKHLPGRTDN EIKNFWRTRI QKYIKQTDVA ATATSSVGSQ SSEINDHAAS TSAHNVFCAQ DQAMDTYSPT TTSYQHTNME FNYGNYSAPV APVTTAATTA
201: DYPVPMTVDD QTGENYWGMD DIWSSMHLLN GN
101: AKHLPGRTDN EIKNFWRTRI QKYIKQTDVA ATATSSVGSQ SSEINDHAAS TSAHNVFCAQ DQAMDTYSPT TTSYQHTNME FNYGNYSAPV APVTTAATTA
201: DYPVPMTVDD QTGENYWGMD DIWSSMHLLN GN
001: MEKRGGGSSG GSGSSAEAEV RKGPWTMEED LILINYIANH GDGVWNSLAK SAGLKRTGKS CRLRWLNYLR PDVRRGNITP EEQLIIMELH AKWGNRWSKI
101: AKHLPGRTDN EIKNFWRTRI QKYIKQSDVT TTSSVGSHHS SEINDQAAST SSHNVFCTQD QAMETYSPTP TSYQHTNMEF NYGNYSAAAV TATVDYPVPM
201: TVDDQTGENY WGMDDIWSSM HLLNGN
101: AKHLPGRTDN EIKNFWRTRI QKYIKQSDVT TTSSVGSHHS SEINDQAAST SSHNVFCTQD QAMETYSPTP TSYQHTNMEF NYGNYSAAAV TATVDYPVPM
201: TVDDQTGENY WGMDDIWSSM HLLNGN
Arabidopsis Description
MYB21Transcription factor MYB21 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK95]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.