Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G415000.1 | Wheat | nucleus | 68.6 | 88.16 |
| TraesCS1B01G436800.1 | Wheat | nucleus | 56.66 | 87.83 |
| TraesCS1A01G406600.1 | Wheat | mitochondrion | 69.28 | 81.53 |
| KRG94092 | Soybean | nucleus | 21.5 | 70.79 |
| Solyc02g086690.2.1 | Tomato | nucleus | 21.84 | 68.09 |
| GSMUA_Achr1P27270_001 | Banana | nucleus | 37.88 | 56.63 |
| VIT_14s0066g01090.t01 | Wine grape | nucleus | 33.45 | 51.85 |
| Solyc02g067760.2.1 | Tomato | nucleus | 34.13 | 51.28 |
| KRH56587 | Soybean | nucleus | 34.47 | 49.03 |
| KRH07188 | Soybean | nucleus | 34.47 | 48.56 |
| KRG94086 | Soybean | nucleus | 34.13 | 48.54 |
| KRG93265 | Soybean | nucleus | 33.79 | 48.29 |
| PGSC0003DMT400001278 | Potato | nucleus | 33.79 | 47.83 |
| GSMUA_Achr6P27290_001 | Banana | nucleus | 31.74 | 47.69 |
| CDY37512 | Canola | nucleus | 32.42 | 47.26 |
| CDY49063 | Canola | nucleus | 32.76 | 46.38 |
| AT3G01530.1 | Thale cress | nucleus | 32.42 | 46.12 |
| CDX91944 | Canola | nucleus | 32.42 | 45.89 |
| Bra039108.1-P | Field mustard | nucleus | 32.08 | 45.85 |
| CDX74303 | Canola | nucleus | 32.08 | 45.19 |
| Bra001005.1-P | Field mustard | nucleus | 32.08 | 45.19 |
| CDY00146 | Canola | nucleus | 25.26 | 44.58 |
| AT5G40350.1 | Thale cress | nucleus | 32.42 | 44.39 |
| AT3G27810.1 | Thale cress | nucleus | 34.13 | 44.25 |
| HORVU3Hr1G056980.1 | Barley | nucleus | 31.74 | 43.87 |
| Bra025300.1-P | Field mustard | nucleus | 34.47 | 43.53 |
| CDX86471 | Canola | nucleus | 34.47 | 43.53 |
| CDY44433 | Canola | nucleus | 34.47 | 43.53 |
| Bra039067.1-P | Field mustard | nucleus | 34.13 | 43.1 |
| CDY20036 | Canola | nucleus | 34.13 | 43.1 |
| HORVU5Hr1G022690.1 | Barley | nucleus | 32.42 | 33.69 |
| HORVU4Hr1G028780.1 | Barley | nucleus | 33.11 | 33.11 |
| HORVU5Hr1G021750.2 | Barley | nucleus | 26.28 | 32.49 |
| HORVU0Hr1G005100.1 | Barley | nucleus | 23.55 | 30.67 |
| HORVU1Hr1G016420.1 | Barley | nucleus | 32.76 | 29.54 |
| HORVU2Hr1G087990.1 | Barley | nucleus | 25.26 | 28.57 |
| HORVU4Hr1G052490.5 | Barley | nucleus, plastid | 35.49 | 28.18 |
| HORVU6Hr1G057670.3 | Barley | nucleus | 25.6 | 27.78 |
| HORVU1Hr1G008810.3 | Barley | nucleus | 24.23 | 27.52 |
| HORVU4Hr1G084360.3 | Barley | nucleus | 24.91 | 27.14 |
| HORVU3Hr1G092820.1 | Barley | nucleus | 30.03 | 26.59 |
| HORVU2Hr1G016380.1 | Barley | nucleus | 31.74 | 25.62 |
| HORVU3Hr1G004050.1 | Barley | nucleus | 29.69 | 24.79 |
| HORVU5Hr1G022710.1 | Barley | cytosol, nucleus | 3.41 | 14.49 |
| GSMUA_Achr9P07000_001 | Banana | nucleus | 46.42 | 10.82 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G089770.2 | EnsemblPlantsGene:HORVU1Hr1G089770 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF510 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| UniParc:UPI000B485DB7 | UniProt:A0A287GND7 | MapMan:15.5.2.1 | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:544744618..544745997
Molecular Weight (calculated)
30542.4 Da
IEP (calculated)
6.913
GRAVY (calculated)
-0.566
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: PPATGGERTM QCAADGGGAE PAVRKGPWTM EEDLVLANYV AANGEGAWNT LARAAGLNRT GKSCRLRWLN YLRPDVRRGN ITPEEHLLIL DLQARWGNRW
101: SKIARHLPGR TDNEIKNFWR TKIQKKRSAG TTASDSTGCQ PPRPSSGSPA VTESRSSSSN SVGRAGAMSN YDAVTAAATE PGGWGDNQLG YAVQEGGGGA
201: RAGGMDGGAR PDSVGRAGAM PHYDYDVVVS ARDPGGWGDQ QLGYAGQGGG GGACAGGMGC GVPPEFLQAA AVAGDNFWGL EEFWPTVPSL HGD
101: SKIARHLPGR TDNEIKNFWR TKIQKKRSAG TTASDSTGCQ PPRPSSGSPA VTESRSSSSN SVGRAGAMSN YDAVTAAATE PGGWGDNQLG YAVQEGGGGA
201: RAGGMDGGAR PDSVGRAGAM PHYDYDVVVS ARDPGGWGDQ QLGYAGQGGG GGACAGGMGC GVPPEFLQAA AVAGDNFWGL EEFWPTVPSL HGD
001: MEKRGGGSSG GSGSSAEAEV RKGPWTMEED LILINYIANH GDGVWNSLAK SAGLKRTGKS CRLRWLNYLR PDVRRGNITP EEQLIIMELH AKWGNRWSKI
101: AKHLPGRTDN EIKNFWRTRI QKYIKQSDVT TTSSVGSHHS SEINDQAAST SSHNVFCTQD QAMETYSPTP TSYQHTNMEF NYGNYSAAAV TATVDYPVPM
201: TVDDQTGENY WGMDDIWSSM HLLNGN
101: AKHLPGRTDN EIKNFWRTRI QKYIKQSDVT TTSSVGSHHS SEINDQAAST SSHNVFCTQD QAMETYSPTP TSYQHTNMEF NYGNYSAAAV TATVDYPVPM
201: TVDDQTGENY WGMDDIWSSM HLLNGN
Arabidopsis Description
MYB21Transcription factor MYB21 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK95]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.