Factsheet for Bra002533.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49581	Canola	nucleus	99.58	99.58
CDX80230	Canola	nucleus	97.89	97.89
AT5G59780.3	Thale cress	nucleus	90.3	91.06
Bra020289.1-P	Field mustard	nucleus	89.45	89.83
Bra006694.1-P	Field mustard	nucleus	91.56	89.67
Bra018223.1-P	Field mustard	nucleus	77.22	72.62
GSMUA_Achr2P16200_001	Banana	nucleus	49.37	57.07
GSMUA_Achr6P15370_001	Banana	nucleus	49.37	55.98
VIT_06s0004g04140.t01	Wine grape	nucleus	59.92	55.47
HORVU5Hr1G021750.2	Barley	nucleus	55.27	55.27
KRH10298	Soybean	nucleus	58.65	54.51
TraesCS5B01G089200.1	Wheat	nucleus	54.43	54.43
TraesCS4B01G143700.1	Wheat	nucleus	54.43	54.2
TraesCS4D01G142300.1	Wheat	nucleus	54.43	54.2
TraesCS5D01G095600.1	Wheat	nucleus	54.01	54.01
GSMUA_Achr10P...	Banana	nucleus	51.48	53.98
Solyc11g073120.1.1	Tomato	nucleus	49.37	53.92
TraesCS4A01G173300.2	Wheat	nucleus	54.01	53.78
PGSC0003DMT400040149	Potato	nucleus	49.37	53.67
TraesCS5A01G083100.1	Wheat	nucleus	53.59	53.59
KRH23019	Soybean	nucleus	59.49	53.41
GSMUA_Achr10P...	Banana	nucleus	47.26	52.83
GSMUA_Achr10P...	Banana	nucleus	51.9	52.12
KXG23736	Sorghum	nucleus	52.74	52.08
Os11t0700500-01	Rice	nucleus	51.9	51.9
KXG29192	Sorghum	nucleus	49.79	51.75
GSMUA_Achr9P28370_001	Banana	nucleus	46.41	51.4
Zm00001d048623_P002	Maize	nucleus	49.37	51.32
Solyc06g005330.2.1	Tomato	nucleus	51.05	51.27
Os12t0567300-00	Rice	nucleus	52.32	51.24
Zm00001d030678_P001	Maize	nucleus	51.9	50.83
GSMUA_Achr5P28350_001	Banana	nucleus	50.63	50.63
GSMUA_Achr11P...	Banana	nucleus	51.48	50.62
GSMUA_Achr8P34340_001	Banana	nucleus	52.32	50.61
KRH29850	Soybean	nucleus	56.54	50.38
KRH24842	Soybean	nucleus	56.12	50.0
Zm00001d041576_P001	Maize	nucleus	52.74	50.0
GSMUA_Achr7P18200_001	Banana	nucleus	50.63	49.79
GSMUA_Achr8P02640_001	Banana	nucleus	45.99	46.19
TraesCS1D01G043300.1	Wheat	nucleus	44.73	41.73
TraesCS1B01G055200.1	Wheat	nucleus	45.15	39.93
HORVU1Hr1G008810.3	Barley	nucleus	43.04	39.53
TraesCS3D01G540600.1	Wheat	nucleus	42.19	39.06
TraesCS1A01G042700.1	Wheat	nucleus	43.04	38.78
TraesCS3A01G535100.1	Wheat	nucleus	42.19	38.46
TraesCS3B01G612200.2	Wheat	nucleus	41.77	37.5
Bra006977.1-P	Field mustard	nucleus	36.71	35.51
Os01t0975300-01	Rice	vacuole	31.22	35.24
Bra028550.1-P	Field mustard	nucleus	35.02	34.58
Bra039108.1-P	Field mustard	nucleus	29.54	34.15
Bra001005.1-P	Field mustard	nucleus	29.96	34.13
KXG29190	Sorghum	nucleus	30.38	33.96
OQU77249	Sorghum	nucleus	43.46	33.44
Bra039067.1-P	Field mustard	nucleus	31.65	32.33
Zm00001d035605_P001	Maize	nucleus	43.88	31.8
Bra025300.1-P	Field mustard	nucleus	30.8	31.47
Bra021389.1-P	Field mustard	nucleus	35.87	31.25
EES17592	Sorghum	nucleus	43.46	30.84
Bra004473.1-P	Field mustard	nucleus	34.6	29.82
Bra025410.1-P	Field mustard	nucleus	33.33	29.48
Bra012482.1-P	Field mustard	nucleus	35.02	29.23
Bra020744.1-P	Field mustard	nucleus	31.65	29.18
Bra036202.1-P	Field mustard	nucleus	32.49	28.84
Bra015029.1-P	Field mustard	nucleus	32.91	28.78
Bra004041.1-P	Field mustard	nucleus	34.18	28.72
Bra028369.1-P	Field mustard	nucleus	32.91	28.47
Bra004297.1-P	Field mustard	nucleus	33.76	28.17
Bra001941.1-P	Field mustard	nucleus	32.49	28.1
Zm00001d035604_P001	Maize	nucleus	42.62	27.45
Bra033948.1-P	Field mustard	nucleus	32.91	27.37
Bra024760.1-P	Field mustard	nucleus	29.96	26.69
Bra001202.1-P	Field mustard	nucleus	33.33	25.99
Bra020624.1-P	Field mustard	nucleus	32.91	24.53
Bra029582.1-P	Field mustard	nucleus	32.91	24.22
Bra040274.1-P	Field mustard	nucleus	32.49	24.06
Bra010021.1-P	Field mustard	nucleus	32.49	23.84
Bra010022.1-P	Field mustard	nucleus	32.49	23.84

Protein Annotations

EnsemblPlants:Bra002533.1	EnsemblPlants:Bra002533.1-P	EnsemblPlantsGene:Bra002533	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF484	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI0002543CFB	UniProt:M4CEA2	MapMan:15.5.2.1	:	:

Description

AT5G59780 (E=3e-114) MYB59, ATMYB59-3 | MYB59 (MYB DOMAIN PROTEIN 59); DNA binding / transcription factor

Coordinates

chrA10:-:9016504..9017447

Molecular Weight (calculated)

27552.3 Da

IEP (calculated)

8.692

GRAVY (calculated)

-0.881

Length

237 amino acids

Sequence
(BLAST)

001: MKNVQEEYRK GPWTEQEDIL LVNFVHAFGD RRWDFVAKVS GLNRTGKSCR LRWVNYLHPG LKRGKMTHQE ERLVLELHAK WGNRWSKIAK KLPGRTDNEI
101: KNYWRTHMRK QAQEKKRPMS PTSSSSNCCS SSMTQDTGGS NGKMNQECDD GNYSMDDIWR EIDQSGANII KPVKDIYYSE QSCYFNFPPL PLASPTWESS
201: LESTWNMDAY ESKMSSFAID QFPLSFEHAR SSWSSLV

Best Arabidopsis Sequence Match ( AT5G59780.3 )
(BLAST)

001: MKLVQEEYRK GPWTEQEDIL LVNFVHLFGD RRWDFVAKVS GLNRTGKSCR LRWVNYLHPG LKRGKMTPQE ERLVLELHAK WGNRWSKIAR KLPGRTDNEI
101: KNYWRTHMRK KAQEKKRPMS PTSSSSNCCS SSMTTTTSQD TGGSNGKMNQ ECEDGYYSMD DIWREIDQSG ANVIKPVKDN YYSEQSCYLN FPPLASPTWE
201: SSLESIWNMD ADESKMSSFA IDQFPLSFEH GSGRL

Arabidopsis Description

MYB59Transcription factor MYB59 [Source:UniProtKB/Swiss-Prot;Acc:Q4JL84]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.