Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P15370_001 | Banana | nucleus | 73.73 | 83.25 |
| GSMUA_Achr2P16200_001 | Banana | nucleus | 58.05 | 66.83 |
| GSMUA_Achr10P... | Banana | nucleus | 59.32 | 61.95 |
| GSMUA_Achr9P28370_001 | Banana | nucleus | 55.51 | 61.22 |
| GSMUA_Achr5P28350_001 | Banana | nucleus | 58.9 | 58.65 |
| GSMUA_Achr7P18200_001 | Banana | nucleus | 59.75 | 58.51 |
| GSMUA_Achr11P... | Banana | nucleus | 58.47 | 57.26 |
| GSMUA_Achr10P... | Banana | nucleus | 51.27 | 57.08 |
| GSMUA_Achr3P01370_001 | Banana | nucleus | 29.66 | 56.45 |
| AT5G59780.3 | Thale cress | nucleus | 53.81 | 54.04 |
| VIT_06s0004g04140.t01 | Wine grape | nucleus | 57.63 | 53.12 |
| GSMUA_Achr4P19990_001 | Banana | nucleus | 28.81 | 53.12 |
| PGSC0003DMT400040149 | Potato | nucleus | 48.73 | 52.75 |
| GSMUA_Achr8P34340_001 | Banana | nucleus | 54.66 | 52.65 |
| CDY70097 | Canola | nucleus | 52.54 | 52.54 |
| Bra020289.1-P | Field mustard | nucleus | 52.54 | 52.54 |
| Solyc11g073120.1.1 | Tomato | nucleus | 48.31 | 52.53 |
| Bra006694.1-P | Field mustard | nucleus | 53.81 | 52.48 |
| CDX71075 | Canola | nucleus | 53.39 | 52.28 |
| CDX88722 | Canola | nucleus | 53.39 | 52.07 |
| CDY49581 | Canola | nucleus | 52.12 | 51.9 |
| Bra002533.1-P | Field mustard | nucleus | 52.12 | 51.9 |
| GSMUA_Achr8P02640_001 | Banana | nucleus | 51.69 | 51.69 |
| Solyc06g005330.2.1 | Tomato | nucleus | 51.27 | 51.27 |
| CDX80230 | Canola | nucleus | 51.27 | 51.05 |
| Bra018223.1-P | Field mustard | nucleus | 52.97 | 49.6 |
| KRH10298 | Soybean | nucleus | 53.39 | 49.41 |
| TraesCS1D01G043300.1 | Wheat | nucleus | 52.12 | 48.43 |
| AT3G46130.1 | Thale cress | nucleus | 52.54 | 48.06 |
| KRH23019 | Soybean | nucleus | 53.39 | 47.73 |
| KRH29850 | Soybean | nucleus | 52.54 | 46.62 |
| TraesCS1B01G055200.1 | Wheat | nucleus | 51.69 | 45.52 |
| KRH24842 | Soybean | nucleus | 51.27 | 45.49 |
| TraesCS1A01G042700.1 | Wheat | nucleus | 50.42 | 45.25 |
| CDX99125 | Canola | nucleus | 52.97 | 44.96 |
| CDX86040 | Canola | nucleus | 52.97 | 44.96 |
| CDX86041 | Canola | nucleus | 52.97 | 44.96 |
| HORVU1Hr1G008810.3 | Barley | nucleus | 48.73 | 44.57 |
| TraesCS3A01G535100.1 | Wheat | nucleus | 45.76 | 41.54 |
| TraesCS3D01G540600.1 | Wheat | nucleus | 44.92 | 41.41 |
| TraesCS3B01G612200.2 | Wheat | nucleus | 45.76 | 40.91 |
| GSMUA_Achr5P21090_001 | Banana | nucleus | 30.93 | 40.11 |
| GSMUA_Achr10P... | Banana | nucleus | 29.66 | 40.0 |
| GSMUA_Achr3P12730_001 | Banana | nucleus | 28.81 | 38.86 |
| GSMUA_Achr6P27290_001 | Banana | nucleus | 31.36 | 37.95 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 32.63 | 37.75 |
| GSMUA_Achr1P21020_001 | Banana | nucleus | 30.93 | 37.44 |
| GSMUA_Achr1P27270_001 | Banana | nucleus | 30.93 | 37.24 |
| OQU77249 | Sorghum | nucleus | 48.31 | 37.01 |
| Os01t0975300-01 | Rice | vacuole | 32.63 | 36.67 |
| GSMUA_Achr11P... | Banana | nucleus | 32.63 | 36.15 |
| GSMUA_Achr11P... | Banana | nucleus | 33.9 | 34.78 |
| Zm00001d035605_P001 | Maize | nucleus | 47.46 | 34.25 |
| EES17592 | Sorghum | nucleus | 47.46 | 33.53 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 32.2 | 32.9 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 32.63 | 31.69 |
| GSMUA_Achr1P24960_001 | Banana | nucleus | 35.59 | 31.11 |
| GSMUA_Achr8P10800_001 | Banana | nucleus | 33.47 | 30.86 |
| Zm00001d035604_P001 | Maize | nucleus | 47.88 | 30.71 |
| GSMUA_Achr11P... | Banana | nucleus | 34.32 | 30.68 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.32 | 30.34 |
| GSMUA_Achr7P05570_001 | Banana | nucleus | 34.75 | 30.15 |
| GSMUA_Achr8P18460_001 | Banana | nucleus | 31.78 | 30.12 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.32 | 29.45 |
| GSMUA_Achr11P... | Banana | nucleus | 32.63 | 29.39 |
| GSMUA_Achr8P29910_001 | Banana | nucleus | 32.63 | 28.62 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.9 | 28.47 |
| GSMUA_Achr9P16640_001 | Banana | nucleus | 31.36 | 28.46 |
| GSMUA_Achr2P22640_001 | Banana | nucleus | 33.47 | 27.05 |
| GSMUA_Achr3P21060_001 | Banana | nucleus | 33.05 | 25.74 |
| GSMUA_Achr3P08370_001 | Banana | nucleus | 30.51 | 25.09 |
| GSMUA_Achr11P... | Banana | nucleus | 32.63 | 24.44 |
| GSMUA_Achr6P09760_001 | Banana | nucleus | 31.78 | 24.35 |
| GSMUA_Achr11P... | Banana | nucleus | 31.78 | 21.8 |
| GSMUA_Achr9P07000_001 | Banana | nucleus | 36.02 | 6.76 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P13520_001 | EnsemblPlants:GSMUA_Achr10T13520_001 | EnsemblPlantsGene:GSMUA_Achr10G13520_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF484 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI00029491A5 | UniProt:M0RHX8 | MapMan:15.5.2.1 | : | : |
Description
Myb-related protein MYBAS1 [Source:GMGC_GENE;Acc:GSMUA_Achr10G13520_001]
Coordinates
chr10:-:22118137..22119027
Molecular Weight (calculated)
26768.4 Da
IEP (calculated)
7.425
GRAVY (calculated)
-0.744
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MANAPPTGAA AATRKGPWTE QEDLQLVWFV RLFGERRWDF LAKVSGLNRT GKSCRLRWVN YLHPGLKRGR MTPQEEHLVL ELHAKWGNRW SRIARRLPGR
101: TDNEIKNYWR THMRKKAQER RTSSAPSPSS SSSSNISELR AEKHEGCSTA EGTSLISGLE VNDNEGKGYT MDQIWNEIAA SESVSQLSFD EYKGGSACNM
201: ECPPVSSPIW EDCSASLWRM EDEDLYPMTD LLLSNC
101: TDNEIKNYWR THMRKKAQER RTSSAPSPSS SSSSNISELR AEKHEGCSTA EGTSLISGLE VNDNEGKGYT MDQIWNEIAA SESVSQLSFD EYKGGSACNM
201: ECPPVSSPIW EDCSASLWRM EDEDLYPMTD LLLSNC
001: MKLVQEEYRK GPWTEQEDIL LVNFVHLFGD RRWDFVAKVS GLNRTGKSCR LRWVNYLHPG LKRGKMTPQE ERLVLELHAK WGNRWSKIAR KLPGRTDNEI
101: KNYWRTHMRK KAQEKKRPMS PTSSSSNCCS SSMTTTTSQD TGGSNGKMNQ ECEDGYYSMD DIWREIDQSG ANVIKPVKDN YYSEQSCYLN FPPLASPTWE
201: SSLESIWNMD ADESKMSSFA IDQFPLSFEH GSGRL
101: KNYWRTHMRK KAQEKKRPMS PTSSSSNCCS SSMTTTTSQD TGGSNGKMNQ ECEDGYYSMD DIWREIDQSG ANVIKPVKDN YYSEQSCYLN FPPLASPTWE
201: SSLESIWNMD ADESKMSSFA IDQFPLSFEH GSGRL
Arabidopsis Description
MYB59Transcription factor MYB59 [Source:UniProtKB/Swiss-Prot;Acc:Q4JL84]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.