Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49581 | Canola | nucleus | 91.49 | 90.72 |
| Bra002533.1-P | Field mustard | nucleus | 91.06 | 90.3 |
| Bra006694.1-P | Field mustard | nucleus | 92.77 | 90.08 |
| CDX71075 | Canola | nucleus | 92.34 | 90.04 |
| CDX80230 | Canola | nucleus | 89.79 | 89.03 |
| CDY70097 | Canola | nucleus | 89.36 | 88.98 |
| Bra020289.1-P | Field mustard | nucleus | 89.36 | 88.98 |
| CDX88722 | Canola | nucleus | 91.49 | 88.84 |
| AT3G46130.1 | Thale cress | nucleus | 82.55 | 75.19 |
| GSMUA_Achr2P16200_001 | Banana | nucleus | 51.49 | 59.02 |
| GSMUA_Achr6P15370_001 | Banana | nucleus | 51.49 | 57.89 |
| HORVU5Hr1G021750.2 | Barley | nucleus | 57.87 | 57.38 |
| TraesCS4B01G143700.1 | Wheat | nucleus | 57.87 | 57.14 |
| TraesCS4D01G142300.1 | Wheat | nucleus | 57.87 | 57.14 |
| TraesCS4A01G173300.2 | Wheat | nucleus | 57.45 | 56.72 |
| VIT_06s0004g04140.t01 | Wine grape | nucleus | 61.7 | 56.64 |
| TraesCS5B01G089200.1 | Wheat | nucleus | 57.02 | 56.54 |
| TraesCS5D01G095600.1 | Wheat | nucleus | 56.6 | 56.12 |
| Solyc11g073120.1.1 | Tomato | nucleus | 51.49 | 55.76 |
| GSMUA_Achr10P... | Banana | nucleus | 53.62 | 55.75 |
| TraesCS5A01G083100.1 | Wheat | nucleus | 56.17 | 55.7 |
| PGSC0003DMT400040149 | Potato | nucleus | 51.49 | 55.5 |
| KRH10298 | Soybean | nucleus | 59.57 | 54.9 |
| Os11t0700500-01 | Rice | nucleus | 55.32 | 54.85 |
| KXG23736 | Sorghum | nucleus | 55.74 | 54.58 |
| KRH23019 | Soybean | nucleus | 60.85 | 54.17 |
| Os12t0567300-00 | Rice | nucleus | 55.74 | 54.13 |
| KXG29192 | Sorghum | nucleus | 52.34 | 53.95 |
| GSMUA_Achr10P... | Banana | nucleus | 54.04 | 53.81 |
| Zm00001d048623_P002 | Maize | nucleus | 51.91 | 53.51 |
| Zm00001d030678_P001 | Maize | nucleus | 54.89 | 53.31 |
| GSMUA_Achr10P... | Banana | nucleus | 48.09 | 53.3 |
| GSMUA_Achr9P28370_001 | Banana | nucleus | 48.51 | 53.27 |
| Solyc06g005330.2.1 | Tomato | nucleus | 53.19 | 52.97 |
| GSMUA_Achr11P... | Banana | nucleus | 54.04 | 52.7 |
| Zm00001d041576_P001 | Maize | nucleus | 55.74 | 52.4 |
| GSMUA_Achr5P28350_001 | Banana | nucleus | 52.34 | 51.9 |
| GSMUA_Achr7P18200_001 | Banana | nucleus | 53.19 | 51.87 |
| GSMUA_Achr8P34340_001 | Banana | nucleus | 54.04 | 51.84 |
| KRH29850 | Soybean | nucleus | 57.87 | 51.13 |
| KRH24842 | Soybean | nucleus | 57.45 | 50.75 |
| GSMUA_Achr8P02640_001 | Banana | nucleus | 47.66 | 47.46 |
| TraesCS1D01G043300.1 | Wheat | nucleus | 47.23 | 43.7 |
| TraesCS1B01G055200.1 | Wheat | nucleus | 47.66 | 41.79 |
| HORVU1Hr1G008810.3 | Barley | nucleus | 45.53 | 41.47 |
| TraesCS1A01G042700.1 | Wheat | nucleus | 45.53 | 40.68 |
| TraesCS3D01G540600.1 | Wheat | nucleus | 43.83 | 40.23 |
| TraesCS3A01G535100.1 | Wheat | nucleus | 43.83 | 39.62 |
| TraesCS3B01G612200.2 | Wheat | nucleus | 43.83 | 39.02 |
| AT3G53200.1 | Thale cress | nucleus | 38.3 | 37.82 |
| OQU77249 | Sorghum | nucleus | 46.38 | 35.39 |
| KXG29190 | Sorghum | nucleus | 31.91 | 35.38 |
| Os01t0975300-01 | Rice | vacuole | 31.06 | 34.76 |
| AT3G01530.1 | Thale cress | nucleus | 30.21 | 34.47 |
| AT5G40350.1 | Thale cress | nucleus | 29.79 | 32.71 |
| Zm00001d035605_P001 | Maize | nucleus | 45.11 | 32.42 |
| AT3G27810.1 | Thale cress | nucleus | 31.06 | 32.3 |
| EES17592 | Sorghum | nucleus | 45.53 | 32.04 |
| AT4G13480.1 | Thale cress | nucleus | 34.89 | 31.42 |
| AT1G48000.1 | Thale cress | nucleus | 31.49 | 30.45 |
| AT3G24310.1 | Thale cress | nucleus | 34.47 | 30.11 |
| AT3G30210.1 | Thale cress | nucleus | 35.32 | 30.07 |
| AT2G47190.1 | Thale cress | nucleus | 34.04 | 29.3 |
| Zm00001d035604_P001 | Maize | nucleus | 45.11 | 28.8 |
| AT1G68320.1 | Thale cress | nucleus | 34.89 | 28.67 |
| AT1G25340.3 | Thale cress | nucleus | 34.47 | 26.3 |
| AT3G06490.1 | Thale cress | nucleus | 34.47 | 25.08 |
| AT5G49620.2 | Thale cress | nucleus | 33.62 | 24.61 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:836099 | ProteinID:AED97231.1 | ProteinID:AED97232.1 | ProteinID:AED97233.1 |
| EMBL:AF062894 | EMBL:AK229048 | ArrayExpress:AT5G59780 | EnsemblPlantsGene:AT5G59780 | RefSeq:AT5G59780 | TAIR:AT5G59780 |
| RefSeq:AT5G59780-TAIR-G | EnsemblPlants:AT5G59780.3 | TAIR:AT5G59780.3 | EMBL:AY519641 | ProteinID:BAB09515.1 | EMBL:DQ075252 |
| EMBL:DQ075253 | EMBL:DQ075254 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006357 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009723 | GO:GO:0009739 | GO:GO:0009751 |
| GO:GO:0009753 | GO:GO:0009987 | GO:GO:0010200 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 |
| GO:GO:0046686 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | Symbol:MYB59 | InterPro:Myb_dom | RefSeq:NP_200786.1 |
| RefSeq:NP_851225.1 | RefSeq:NP_851226.1 | PFAM:PF00249 | PO:PO:0000003 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF484 | UniProt:Q4JL84 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00000A952B |
| EMBL:Z95772 | EMBL:Z95781 | SEG:seg | : | : | : |
Description
MYB59Transcription factor MYB59 [Source:UniProtKB/Swiss-Prot;Acc:Q4JL84]
Coordinates
chr5:-:24081922..24083562
Molecular Weight (calculated)
27238.1 Da
IEP (calculated)
8.690
GRAVY (calculated)
-0.891
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLVQEEYRK GPWTEQEDIL LVNFVHLFGD RRWDFVAKVS GLNRTGKSCR LRWVNYLHPG LKRGKMTPQE ERLVLELHAK WGNRWSKIAR KLPGRTDNEI
101: KNYWRTHMRK KAQEKKRPMS PTSSSSNCCS SSMTTTTSQD TGGSNGKMNQ ECEDGYYSMD DIWREIDQSG ANVIKPVKDN YYSEQSCYLN FPPLASPTWE
201: SSLESIWNMD ADESKMSSFA IDQFPLSFEH GSGRL
101: KNYWRTHMRK KAQEKKRPMS PTSSSSNCCS SSMTTTTSQD TGGSNGKMNQ ECEDGYYSMD DIWREIDQSG ANVIKPVKDN YYSEQSCYLN FPPLASPTWE
201: SSLESIWNMD ADESKMSSFA IDQFPLSFEH GSGRL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.