CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 6
golgi 1
cytosol 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10301	Soybean	mitochondrion	34.71	76.36
KRH29857	Soybean	mitochondrion	33.06	72.73
AT5G59613.1	Thale cress	cytosol, extracellular, mitochondrion, nucleus	31.41	69.09
AT3G46430.1	Thale cress	cytosol, extracellular, mitochondrion, nucleus	31.41	69.09
Bra002547.1-P	Field mustard	mitochondrion	30.58	67.27
Bra006702.1-P	Field mustard	mitochondrion	30.58	67.27
Bra020305.1-P	Field mustard	cytosol	30.58	67.27
Solyc11g005050.1.1	Tomato	mitochondrion	28.93	63.64
Solyc06g060080.2.1	Tomato	plastid	28.1	61.82
PGSC0003DMT400030756	Potato	mitochondrion	28.1	61.82
PGSC0003DMT400015500	Potato	mitochondrion	28.1	61.82
KRH24848	Soybean	endoplasmic reticulum	33.06	59.7
VIT_06s0004g04380.t01	Wine grape	cytosol	25.62	59.62
TraesCS3B01G602300.1	Wheat	mitochondrion	26.45	58.18
TraesCS3D01G537200.1	Wheat	mitochondrion	26.45	58.18
EES18900	Sorghum	cytosol	24.79	53.57
EER97598	Sorghum	cytosol	24.79	53.57
Zm00001d035637_P001	Maize	mitochondrion	23.97	51.79
Zm00001d007011_P001	Maize	cytosol	23.97	50.88
TraesCS1B01G045700.1	Wheat	mitochondrion	24.79	50.85
Os03t0606200-01	Rice	mitochondrion	23.97	50.0
TraesCS7D01G136800.1	Wheat	unclear	23.97	50.0
TraesCS1D01G037300.1	Wheat	mitochondrion	23.97	49.15
TraesCS1A01G035800.1	Wheat	golgi	23.97	49.15
GSMUA_Achr2P19100_001	Banana	cytosol	25.62	46.97
Zm00001d011055_P001	Maize	mitochondrion	25.62	39.74
Zm00001d042952_P001	Maize	cytosol	25.62	22.14
Zm00001d020144_P001	Maize	mitochondrion	20.66	22.12
Zm00001d029797_P001	Maize	cytosol	24.79	21.9
HORVU2Hr1G076650.1	Barley	cytosol	24.79	19.61
Zm00001d039458_P001	Maize	cytosol	24.79	9.12

Protein Annotations

EMBL:ACUP02008450	EnsemblPlants:KRH23016	EnsemblPlantsGene:GLYMA_13G333000	EntrezGene:100784597	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	PANTHER:PTHR34565	ProteinID:KRH23016	ProteinID:KRH23016.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI00023CF480	UniProt:I1M4S7	MapMan:2.4.6.1.7	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:42704740..42706920

Molecular Weight (calculated)

14123.6 Da

IEP (calculated)

10.035

GRAVY (calculated)

0.162

Length

121 amino acids

Sequence
(BLAST)

001: MRLFDPWPVF FKREWKRNWP FLVGFAVTGT LITKLSLGLS ANVLLLLLLR QPPKLDFCSE SDFPFRRGGS HKVKIRPGTQ EVTLEWKICS DFAHCIRCVK
101: RALLVINEER CCIHSMFLLP F

Best Arabidopsis Sequence Match ( AT3G46430.1 )
(BLAST)

1: MRLFDPWPVF FKREWKRCWP FLTGFAVTGV LITKLTAGLT EEDAKNSKFV QQHRR

Arabidopsis Description

AT3g46430/F18L15_150 [Source:UniProtKB/TrEMBL;Acc:Q9SN96]
SUBAcon: [mitochondrion,extracellular,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.