Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029797_P001 | Maize | cytosol | 86.73 | 71.53 |
| Zm00001d042952_P001 | Maize | cytosol | 85.84 | 69.29 |
| Zm00001d035637_P001 | Maize | mitochondrion | 20.35 | 41.07 |
| Zm00001d007011_P001 | Maize | cytosol | 20.35 | 40.35 |
| KRH29857 | Soybean | mitochondrion | 19.47 | 40.0 |
| KRH10301 | Soybean | mitochondrion | 18.58 | 38.18 |
| VIT_06s0004g04380.t01 | Wine grape | cytosol | 16.81 | 36.54 |
| Solyc06g060080.2.1 | Tomato | plastid | 17.7 | 36.36 |
| Solyc11g005050.1.1 | Tomato | mitochondrion | 17.7 | 36.36 |
| AT3G46430.1 | Thale cress | cytosol, extracellular, mitochondrion, nucleus | 17.7 | 36.36 |
| AT5G59613.1 | Thale cress | cytosol, extracellular, mitochondrion, nucleus | 17.7 | 36.36 |
| Bra002547.1-P | Field mustard | mitochondrion | 17.7 | 36.36 |
| Bra006702.1-P | Field mustard | mitochondrion | 17.7 | 36.36 |
| Bra020305.1-P | Field mustard | cytosol | 17.7 | 36.36 |
| PGSC0003DMT400015500 | Potato | mitochondrion | 16.81 | 34.55 |
| PGSC0003DMT400030756 | Potato | mitochondrion | 16.81 | 34.55 |
| KRH24848 | Soybean | endoplasmic reticulum | 19.47 | 32.84 |
| Os03t0606200-01 | Rice | mitochondrion | 16.81 | 32.76 |
| TraesCS3B01G602300.1 | Wheat | mitochondrion | 15.93 | 32.73 |
| TraesCS3D01G537200.1 | Wheat | mitochondrion | 15.93 | 32.73 |
| Zm00001d011055_P001 | Maize | mitochondrion | 22.12 | 32.05 |
| TraesCS7D01G136800.1 | Wheat | unclear | 15.93 | 31.03 |
| TraesCS1D01G037300.1 | Wheat | mitochondrion | 15.93 | 30.51 |
| TraesCS1B01G045700.1 | Wheat | mitochondrion | 15.04 | 28.81 |
| TraesCS1A01G035800.1 | Wheat | golgi | 15.04 | 28.81 |
| GSMUA_Achr2P19100_001 | Banana | cytosol | 16.81 | 28.79 |
| Zm00001d039458_P001 | Maize | cytosol | 73.45 | 25.23 |
| KRH23016 | Soybean | mitochondrion | 22.12 | 20.66 |
| HORVU2Hr1G076650.1 | Barley | cytosol | 18.58 | 13.73 |
Protein Annotations
| EnsemblPlants:Zm00001d020144_P001 | EnsemblPlants:Zm00001d020144_T001 | EnsemblPlantsGene:Zm00001d020144 | PANTHER:PTHR22874 | PANTHER:PTHR22874:SF6 | ProteinID:ONM54346.1 |
| UniParc:UPI0008446B2D | UniProt:A0A1D6I2D2 | MapMan:2.4.6.1.7 | : | : | : |
Description
Transducin family protein / WD-40 repeat family protein
Coordinates
chr7:-:95572868..95573963
Molecular Weight (calculated)
13107.7 Da
IEP (calculated)
9.815
GRAVY (calculated)
-0.433
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTFDPWPVF FHREWKRNCP FLTGNIFSLL AQRELSPRTK KQAKNLWTKP PRLDACPIES KFWGTYAQHD LLSWAEAEFL HWWIPKDCPL TPSSKATIAA
101: AFSTDGRVLA STQ
101: AFSTDGRVLA STQ
001: MTESIWLNDQ SSPRSMIPSA KPVANVHRQR CRSVFKLLVQ REISPNTKFV PRKRWGESRC DADSSCGTTS EPVREQGLNL ISWVEAESLQ HLSAKYCPLV
101: PPPRSTIAAA FSSDGRTLAS THGDHTVKII DCETGKCLKI LTGHRRTPWV VRFHPRHSEI VASGSLDHEV RLWNAKTGEC IRTHDFYRPI ASIAFHAGGE
201: LLAVASGHKL HIWHYNKGGD DSAPAIVLKT RRSLRAVHFH PHGVPLLLTA EVTDIDSSDS AMTRSTSPGY LRYPPPAIFF TNTQSGSRTS LAAELPLVPL
301: PYLLLPSYSA DDPRILYSSG TTGPRNAQTR FQSNQSSVEH GSRTISPSPL PMATSADLSG SYHVPDNSAS NTFATQAGAR NSTTAVDAMD VDEAQPVGRN
401: RVPSQVSSQP DLLEFGQLQQ LFHFRDRGSW ELPFLQGWLM AQSQAGANSV ALPTGSSGHV NSTPYMGSSS ASHSSTASLE AGVASLEIPG GVNLYGVSAR
501: GDSRDRILQS RFAGSGLAEG RSSRNTQHEG ADAQPVVNRI PSELASSIAA AELPCTVKLR VWSHDIKDPC SILKSDKCRL TIHHAVLCSE MGAHFSPCGR
601: YLAACVACVI PHAETDPSLQ TLVQQDSGLA TSPTRHPVTA HQVMYELRVY SLEKESFGSV LVSRAIRAAH CLTSIQFSPT SEHILLAYGR RHGSLLKSIV
701: SDGETTSHFF TVLEIYRVSD MELVRVLPSS EDEVNVACFH PSPGGGLVYG TKEGKLRIFR YNTAAASNLT APNSSPDENL AEVELLTRCR PMR
101: PPPRSTIAAA FSSDGRTLAS THGDHTVKII DCETGKCLKI LTGHRRTPWV VRFHPRHSEI VASGSLDHEV RLWNAKTGEC IRTHDFYRPI ASIAFHAGGE
201: LLAVASGHKL HIWHYNKGGD DSAPAIVLKT RRSLRAVHFH PHGVPLLLTA EVTDIDSSDS AMTRSTSPGY LRYPPPAIFF TNTQSGSRTS LAAELPLVPL
301: PYLLLPSYSA DDPRILYSSG TTGPRNAQTR FQSNQSSVEH GSRTISPSPL PMATSADLSG SYHVPDNSAS NTFATQAGAR NSTTAVDAMD VDEAQPVGRN
401: RVPSQVSSQP DLLEFGQLQQ LFHFRDRGSW ELPFLQGWLM AQSQAGANSV ALPTGSSGHV NSTPYMGSSS ASHSSTASLE AGVASLEIPG GVNLYGVSAR
501: GDSRDRILQS RFAGSGLAEG RSSRNTQHEG ADAQPVVNRI PSELASSIAA AELPCTVKLR VWSHDIKDPC SILKSDKCRL TIHHAVLCSE MGAHFSPCGR
601: YLAACVACVI PHAETDPSLQ TLVQQDSGLA TSPTRHPVTA HQVMYELRVY SLEKESFGSV LVSRAIRAAH CLTSIQFSPT SEHILLAYGR RHGSLLKSIV
701: SDGETTSHFF TVLEIYRVSD MELVRVLPSS EDEVNVACFH PSPGGGLVYG TKEGKLRIFR YNTAAASNLT APNSSPDENL AEVELLTRCR PMR
Arabidopsis Description
Transducin family protein / WD-40 repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4I458]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.