CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
cytosol 2

Predictors

GFP

MS/MS

Papers

mitochondrion: 27780359

msms PMID: 27780359 doi

G Mustafa, S Komatsu

Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10301	Soybean	mitochondrion	89.09	89.09
AT5G59613.1	Thale cress	cytosol, extracellular, mitochondrion, nucleus	81.82	81.82
AT3G46430.1	Thale cress	cytosol, extracellular, mitochondrion, nucleus	81.82	81.82
KRH24848	Soybean	endoplasmic reticulum	98.18	80.6
Bra002547.1-P	Field mustard	mitochondrion	80.0	80.0
Bra006702.1-P	Field mustard	mitochondrion	80.0	80.0
Bra020305.1-P	Field mustard	cytosol	80.0	80.0
Solyc06g060080.2.1	Tomato	plastid	78.18	78.18
Solyc11g005050.1.1	Tomato	mitochondrion	78.18	78.18
PGSC0003DMT400015500	Potato	mitochondrion	78.18	78.18
PGSC0003DMT400030756	Potato	mitochondrion	76.36	76.36
TraesCS3D01G537200.1	Wheat	mitochondrion	70.91	70.91
TraesCS3B01G602300.1	Wheat	mitochondrion	70.91	70.91
EES18900	Sorghum	cytosol	70.91	69.64
EER97598	Sorghum	cytosol	70.91	69.64
Os03t0606200-01	Rice	mitochondrion	72.73	68.97
TraesCS7D01G136800.1	Wheat	unclear	72.73	68.97
Zm00001d035637_P001	Maize	mitochondrion	69.09	67.86
TraesCS1A01G035800.1	Wheat	golgi	72.73	67.8
Zm00001d007011_P001	Maize	cytosol	69.09	66.67
TraesCS1B01G045700.1	Wheat	mitochondrion	70.91	66.1
TraesCS1D01G037300.1	Wheat	mitochondrion	70.91	66.1
GSMUA_Achr2P19100_001	Banana	cytosol	74.55	62.12
VIT_06s0004g04380.t01	Wine grape	cytosol	54.55	57.69
Zm00001d011055_P001	Maize	mitochondrion	63.64	44.87
KRH23016	Soybean	mitochondrion	72.73	33.06
Zm00001d042952_P001	Maize	cytosol	61.82	24.29
Zm00001d029797_P001	Maize	cytosol	60.0	24.09
HORVU2Hr1G076650.1	Barley	cytosol	63.64	22.88
Zm00001d020144_P001	Maize	mitochondrion	40.0	19.47
Zm00001d039458_P001	Maize	cytosol	58.18	9.73

Protein Annotations

EMBL:ACUP02006829	EnsemblPlants:KRH29857	EnsemblPlantsGene:GLYMA_11G143200	EntrezGene:100778481	PANTHER:PTHR34565	ProteinID:KRH29857
ProteinID:KRH29857.1	TMHMM:TMhelix	UniParc:UPI0001CAA823	UniProt:I1LK70	MapMan:2.4.6.1.7	:

Description

hypothetical protein

Coordinates

chr11:-:10929223..10931716

Molecular Weight (calculated)

6538.0 Da

IEP (calculated)

11.222

GRAVY (calculated)

-0.420

Length

55 amino acids

Sequence
(BLAST)

1: MRKFDPWPVF FKREWKRNWP FLVGFAVTGA LITKLSLGLT EEEAKNSKFV KAHKR

Best Arabidopsis Sequence Match ( AT5G59613.2 )
(BLAST)

1: MRLFDPWPVF FKREWKRCWP FLTGFAVTGV LITKLTAGLT EEDAKNSKFV QQHRR

Arabidopsis Description

AT3g46430/F18L15_150 [Source:UniProtKB/TrEMBL;Acc:Q9SN96]
SUBAcon: [mitochondrion,extracellular,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.