Factsheet for Os03t0606200-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
extracellular 1
plasma membrane 1
cytosol 2

Predictors

GFP

MS/MS

Papers

mitochondrion: 12746528
mitochondrion: 19010998
plastid: 21433289
mitochondrion: 23027867
plasma membrane: 27800704
plastid: 27992503

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 12746528 doi

JL Heazlewood, KA Howell, J Whelan, AH Millar

Plant Molecular Biology Group, School of Biomedical and Chemical Sciences, The University of Western Australia, Crawley 6009, Australia.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G136800.1	Wheat	unclear	87.93	87.93
TraesCS1D01G037300.1	Wheat	mitochondrion	86.21	84.75
TraesCS1A01G035800.1	Wheat	golgi	86.21	84.75
Zm00001d035637_P001	Maize	mitochondrion	81.03	83.93
TraesCS1B01G045700.1	Wheat	mitochondrion	84.48	83.05
Zm00001d007011_P001	Maize	cytosol	81.03	82.46
EER97598	Sorghum	cytosol	77.59	80.36
EES18900	Sorghum	cytosol	77.59	80.36
Bra002547.1-P	Field mustard	mitochondrion	75.86	80.0
Bra006702.1-P	Field mustard	mitochondrion	75.86	80.0
AT5G59613.1	Thale cress	cytosol, extracellular, mitochondrion, nucleus	74.14	78.18
Bra020305.1-P	Field mustard	cytosol	74.14	78.18
TraesCS3D01G537200.1	Wheat	mitochondrion	74.14	78.18
TraesCS3B01G602300.1	Wheat	mitochondrion	74.14	78.18
AT3G46430.1	Thale cress	cytosol, extracellular, mitochondrion, nucleus	74.14	78.18
Solyc06g060080.2.1	Tomato	plastid	72.41	76.36
Solyc11g005050.1.1	Tomato	mitochondrion	70.69	74.55
PGSC0003DMT400015500	Potato	mitochondrion	70.69	74.55
PGSC0003DMT400030756	Potato	mitochondrion	68.97	72.73
KRH29857	Soybean	mitochondrion	68.97	72.73
KRH10301	Soybean	mitochondrion	63.79	67.27
KRH24848	Soybean	endoplasmic reticulum	70.69	61.19
GSMUA_Achr2P19100_001	Banana	cytosol	68.97	60.61
Zm00001d011055_P001	Maize	mitochondrion	72.41	53.85
VIT_06s0004g04380.t01	Wine grape	cytosol	46.55	51.92
HORVU2Hr1G076650.1	Barley	cytosol	79.31	30.07
Zm00001d042952_P001	Maize	cytosol	68.97	28.57
Zm00001d029797_P001	Maize	cytosol	67.24	28.47
KRH23016	Soybean	mitochondrion	50.0	23.97
Zm00001d020144_P001	Maize	mitochondrion	32.76	16.81
Zm00001d039458_P001	Maize	cytosol	65.52	11.55

Protein Annotations

EnsemblPlants:Os03t0606200-01	EnsemblPlantsGene:Os03g0606200	EntrezGene:4333416	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	PANTHER:PTHR34565	ProteinID:BAF12550.2	ProteinID:BAS85226.1
ProteinID:EEE59476.1	RefSeq:XP_015631877.1	TMHMM:TMhelix	UniParc:UPI000193388F	UniProt:Q0DQD8	MapMan:2.4.6.1.7

Description

mitochondrial ATP synthase 6 kDa subunitMitochondrial ATP synthase 6 KD subunit. (Os03t0606200-01)

Coordinates

chr3:+:22740588..22741268

Molecular Weight (calculated)

6971.5 Da

IEP (calculated)

10.782

GRAVY (calculated)

-0.314

Length

58 amino acids

Sequence
(BLAST)

1: MFFSRFDPWP VFFRREWKRC WPFLTGFAVT GAIITKMTAG FTEEDLKNSK FVQAHKKH

Best Arabidopsis Sequence Match ( AT5G59613.2 )
(BLAST)

1: MRLFDPWPVF FKREWKRCWP FLTGFAVTGV LITKLTAGLT EEDAKNSKFV QQHRR

Arabidopsis Description

AT3g46430/F18L15_150 [Source:UniProtKB/TrEMBL;Acc:Q9SN96]
SUBAcon: [mitochondrion,extracellular,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.