Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
27297264
plasma membrane: 27341663 |
msms PMID:
27297264
doi
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d007011_P001 | Maize | cytosol | 98.21 | 96.49 |
| EER97598 | Sorghum | cytosol | 92.86 | 92.86 |
| EES18900 | Sorghum | cytosol | 92.86 | 92.86 |
| Os03t0606200-01 | Rice | mitochondrion | 83.93 | 81.03 |
| Bra002547.1-P | Field mustard | mitochondrion | 75.0 | 76.36 |
| Bra006702.1-P | Field mustard | mitochondrion | 75.0 | 76.36 |
| Bra020305.1-P | Field mustard | cytosol | 75.0 | 76.36 |
| Solyc06g060080.2.1 | Tomato | plastid | 75.0 | 76.36 |
| TraesCS7D01G136800.1 | Wheat | unclear | 78.57 | 75.86 |
| AT5G59613.1 | Thale cress | cytosol, extracellular, mitochondrion, nucleus | 73.21 | 74.55 |
| AT3G46430.1 | Thale cress | cytosol, extracellular, mitochondrion, nucleus | 73.21 | 74.55 |
| TraesCS1D01G037300.1 | Wheat | mitochondrion | 76.79 | 72.88 |
| TraesCS1B01G045700.1 | Wheat | mitochondrion | 76.79 | 72.88 |
| TraesCS1A01G035800.1 | Wheat | golgi | 76.79 | 72.88 |
| PGSC0003DMT400030756 | Potato | mitochondrion | 71.43 | 72.73 |
| Solyc11g005050.1.1 | Tomato | mitochondrion | 71.43 | 72.73 |
| PGSC0003DMT400015500 | Potato | mitochondrion | 71.43 | 72.73 |
| TraesCS3B01G602300.1 | Wheat | mitochondrion | 69.64 | 70.91 |
| TraesCS3D01G537200.1 | Wheat | mitochondrion | 69.64 | 70.91 |
| KRH29857 | Soybean | mitochondrion | 67.86 | 69.09 |
| KRH10301 | Soybean | mitochondrion | 67.86 | 69.09 |
| GSMUA_Achr2P19100_001 | Banana | cytosol | 80.36 | 68.18 |
| Zm00001d011055_P001 | Maize | mitochondrion | 87.5 | 62.82 |
| KRH24848 | Soybean | endoplasmic reticulum | 69.64 | 58.21 |
| VIT_06s0004g04380.t01 | Wine grape | cytosol | 50.0 | 53.85 |
| Zm00001d029797_P001 | Maize | cytosol | 82.14 | 33.58 |
| Zm00001d042952_P001 | Maize | cytosol | 83.93 | 33.57 |
| HORVU2Hr1G076650.1 | Barley | cytosol | 73.21 | 26.8 |
| KRH23016 | Soybean | mitochondrion | 51.79 | 23.97 |
| Zm00001d020144_P001 | Maize | mitochondrion | 41.07 | 20.35 |
| Zm00001d039458_P001 | Maize | cytosol | 80.36 | 13.68 |
Protein Annotations
| EMBL:EU961271 | EnsemblPlants:Zm00001d035637_P001 | EnsemblPlants:Zm00001d035637_T001 | EnsemblPlantsGene:Zm00001d035637 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | ncoils:Coil | PANTHER:PTHR34565 | ProteinID:AQK79385.1 | TMHMM:TMhelix | UniParc:UPI000182C37A |
| UniProt:B6T8F6 | MapMan:2.4.6.1.7 | : | : | : | : |
Description
No Description!
Coordinates
chr6:+:38040736..38040906
Molecular Weight (calculated)
6898.4 Da
IEP (calculated)
10.901
GRAVY (calculated)
-0.670
Length
56 amino acids
Sequence
(BLAST)
(BLAST)
1: MKTFDPWPVF FRREWKRNWP FLTGFAITGF IITKMTANFT EEDLKNSKFV QEHKKR
1: MRLFDPWPVF FKREWKRCWP FLTGFAVTGV LITKLTAGLT EEDAKNSKFV QQHRR
Arabidopsis Description
AT3g46430/F18L15_150 [Source:UniProtKB/TrEMBL;Acc:Q9SN96]
SUBAcon: [mitochondrion,extracellular,nucleus,cytosol]
SUBAcon: [mitochondrion,extracellular,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.