Factsheet for TraesCS1A01G035800.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 5
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	extracellular, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	extracellular
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G045700.1	Wheat	mitochondrion	98.31	98.31
TraesCS7D01G136800.1	Wheat	unclear	96.61	98.28
Os03t0606200-01	Rice	mitochondrion	84.75	86.21
EER97598	Sorghum	cytosol	74.58	78.57
EES18900	Sorghum	cytosol	74.58	78.57
Bra020305.1-P	Field mustard	cytosol	72.88	78.18
Zm00001d007011_P001	Maize	cytosol	74.58	77.19
Zm00001d035637_P001	Maize	mitochondrion	72.88	76.79
Bra002547.1-P	Field mustard	mitochondrion	71.19	76.36
Bra006702.1-P	Field mustard	mitochondrion	71.19	76.36
AT5G59613.1	Thale cress	cytosol, extracellular, mitochondrion, nucleus	69.49	74.55
Solyc11g005050.1.1	Tomato	mitochondrion	69.49	74.55
PGSC0003DMT400015500	Potato	mitochondrion	69.49	74.55
AT3G46430.1	Thale cress	cytosol, extracellular, mitochondrion, nucleus	69.49	74.55
KRH29857	Soybean	mitochondrion	67.8	72.73
PGSC0003DMT400030756	Potato	mitochondrion	67.8	72.73
Solyc06g060080.2.1	Tomato	plastid	67.8	72.73
KRH10301	Soybean	mitochondrion	62.71	67.27
KRH24848	Soybean	endoplasmic reticulum	69.49	61.19
GSMUA_Achr2P19100_001	Banana	cytosol	67.8	60.61
VIT_06s0004g04380.t01	Wine grape	cytosol	44.07	50.0
Zm00001d011055_P001	Maize	mitochondrion	66.1	50.0
HORVU2Hr1G076650.1	Barley	cytosol	86.44	33.33
Zm00001d042952_P001	Maize	cytosol	61.02	25.71
Zm00001d029797_P001	Maize	cytosol	59.32	25.55
KRH23016	Soybean	mitochondrion	49.15	23.97
Zm00001d020144_P001	Maize	mitochondrion	28.81	15.04
Zm00001d039458_P001	Maize	cytosol	57.63	10.33

Protein Annotations

EnsemblPlants:TraesCS1A01G035800.1

EnsemblPlantsGene:TraesCS1A01G035800

PANTHER:PTHR34565

TMHMM:TMhelix

MapMan:2.4.6.1.7

Description

No Description!

Coordinates

chr1A:-:19897429..19897608

Molecular Weight (calculated)

6888.3 Da

IEP (calculated)

10.785

GRAVY (calculated)

-0.237

Length

59 amino acids

Sequence
(BLAST)

1: MKFFSAFDPW PVFFRREWGR TWPFLAGFAV TGALITKMTA GFTEEDLKNS KFVQAHKNK

Best Arabidopsis Sequence Match ( AT5G59613.2 )
(BLAST)

1: MRLFDPWPVF FKREWKRCWP FLTGFAVTGV LITKLTAGLT EEDAKNSKFV QQHRR

Arabidopsis Description

AT3g46430/F18L15_150 [Source:UniProtKB/TrEMBL;Acc:Q9SN96]
SUBAcon: [mitochondrion,extracellular,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.