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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: unclear

Predictor Summary:
  • plastid 1
  • mitochondrion 5
  • extracellular 1
Predictors GFP MS/MS Papers
Winner Takes All:unclear
Any Predictor:extracellular, mitochondrion, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:extracellular
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
 unclear: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1A01G035800.1 Wheat golgi 98.28 96.61
TraesCS1D01G037300.1 Wheat mitochondrion 98.28 96.61
TraesCS1B01G045700.1 Wheat mitochondrion 96.55 94.92
Os03t0606200-01 Rice mitochondrion 87.93 87.93
TraesCS3D01G537200.1 Wheat mitochondrion 77.59 81.82
EER97598 Sorghum cytosol 75.86 78.57
EES18900 Sorghum cytosol 75.86 78.57
Zm00001d035637_P001 Maize mitochondrion 75.86 78.57
Bra020305.1-P Field mustard cytosol 74.14 78.18
Zm00001d007011_P001 Maize cytosol 75.86 77.19
Bra006702.1-P Field mustard mitochondrion 72.41 76.36
Bra002547.1-P Field mustard mitochondrion 72.41 76.36
AT3G46430.1 Thale cress cytosol, extracellular, mitochondrion, nucleus 70.69 74.55
Solyc06g060080.2.1 Tomato plastid 70.69 74.55
AT5G59613.1 Thale cress cytosol, extracellular, mitochondrion, nucleus 70.69 74.55
KRH29857 Soybean mitochondrion 68.97 72.73
PGSC0003DMT400015500 Potato mitochondrion 68.97 72.73
Solyc11g005050.1.1 Tomato mitochondrion 68.97 72.73
PGSC0003DMT400030756 Potato mitochondrion 67.24 70.91
KRH10301 Soybean mitochondrion 63.79 67.27
KRH24848 Soybean endoplasmic reticulum 70.69 61.19
GSMUA_Achr2P19100_001 Banana cytosol 67.24 59.09
VIT_06s0004g04380.t01 Wine grape cytosol 44.83 50.0
Zm00001d011055_P001 Maize mitochondrion 67.24 50.0
HORVU2Hr1G076650.1 Barley cytosol 87.93 33.33
Zm00001d042952_P001 Maize cytosol 63.79 26.43
Zm00001d029797_P001 Maize cytosol 62.07 26.28
KRH23016 Soybean mitochondrion 50.0 23.97
Zm00001d020144_P001 Maize mitochondrion 31.03 15.93
Zm00001d039458_P001 Maize cytosol 60.34 10.64
Protein Annotations
EnsemblPlants:TraesCS7D01G136800.1EnsemblPlantsGene:TraesCS7D01G136800PANTHER:PTHR34565TMHMM:TMhelixMapMan:2.4.6.1.7:
Description
No Description!
Coordinates
chr7D:-:88003526..88003702
Molecular Weight (calculated)
6774.2 Da
IEP (calculated)
10.785
GRAVY (calculated)
-0.181
Length
58 amino acids
Sequence
(BLAST)
1: MKFFSAFDPW PVFFRREWGR TWPFLAGFAV TGALITKMTA GFTEEDLKNS KFVQAHKK
Best Arabidopsis Sequence Match ( AT5G59613.2 )
(BLAST)
1: MRLFDPWPVF FKREWKRCWP FLTGFAVTGV LITKLTAGLT EEDAKNSKFV QQHRR
Arabidopsis Description
AT3g46430/F18L15_150 [Source:UniProtKB/TrEMBL;Acc:Q9SN96]
SUBAcon: [mitochondrion,extracellular,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.