CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70386	Soybean	cytosol	56.64	88.58
VIT_16s0013g00280.t01	Wine grape	nucleus	65.49	65.05
Solyc03g095210.1.1	Tomato	cytosol, endoplasmic reticulum, nucleus	58.41	57.39
PGSC0003DMT400013474	Potato	cytosol	59.07	56.09
GSMUA_Achr10P...	Banana	nucleus	46.9	52.09
GSMUA_Achr11P...	Banana	mitochondrion	43.14	46.21
KRH27762	Soybean	nucleus	42.26	41.98
KRH77717	Soybean	nucleus	41.59	41.32
KRH44738	Soybean	nucleus	39.6	40.5
KRH68047	Soybean	nucleus	39.16	38.73
KRG94456	Soybean	cytosol	19.03	36.6
KRH08491	Soybean	cytosol	10.84	35.0
KRH77460	Soybean	nucleus, plastid	34.96	34.42
KRH57275	Soybean	nucleus	34.73	34.2
KRG97899	Soybean	plastid	35.18	32.52
KRH30985	Soybean	plastid	35.62	32.2
KRH27985	Soybean	nucleus, plastid	30.75	30.62
KRH04001	Soybean	mitochondrion	35.18	30.23
KRH07005	Soybean	nucleus	6.86	25.0

Protein Annotations

EntrezGene:100787876	Gene3D:2.130.10.10	MapMan:35.1	EMBL:ACUP02006473	InterPro:Apc4_WD40_dom	InterPro:Cdc20/Fizzy
EnsemblPlantsGene:GLYMA_10G117000	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010997	GO:GO:0019538	GO:GO:0030234	GO:GO:0097027
GO:GO:1904668	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	UniProt:K7LIT2	EnsemblPlants:KRH33341
ProteinID:KRH33341	ProteinID:KRH33341.1	PFAM:PF00400	PFAM:PF12894	ScanProsite:PS00678	PFscan:PS50082
PFscan:PS50294	PANTHER:PTHR19918	PANTHER:PTHR19918:SF15	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI000296D8FE
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	:

Description

hypothetical protein

Coordinates

chr10:+:29449576..29453524

Molecular Weight (calculated)

51511.9 Da

IEP (calculated)

8.474

GRAVY (calculated)

-0.528

Length

452 amino acids

Sequence
(BLAST)

001: MWNLEHDWYS PKSLLSTPTH YDFPGDRFIP NRSLMDLDQA HSLLTNRTRK IQNKEFNDLY RQIVDEKLNL DSEGNPFKML VFRGSPKSSR KSILHIDEMR
101: EEEAAALQNT SNQHYYRRRL PKKESRILDA PNIRNDFYSN IMDWGNNNIL AIALDSDMYL WNSENKNVFK LFKATNNDFP TSVSWSEDTK YLAIGFMNSK
201: LQLWDAETSK PIRILQGHGH RIATIAWNGQ ILTSGSHDKY IINHDVRARN NVISQVKAHK AEVCGLKWTR RSNMLASGGN ENHIYVWDLV KMSSSNFLHC
301: FKDHCAAVKA LAWCPYDSSV LASGGGTEDS CIKLWNVKKG SSICSIDTKA QVCGLEWNRH HKELLSGHGF STSAHHNQLC MWKYPSMTKV GGLDRHASRV
401: LHLCQSPDGL TVVSAGADES LRFWDVFGPP VNNTSEISDL DNLLSLKVSP IR

Best Arabidopsis Sequence Match ( AT4G33260.1 )
(BLAST)

001: MDAGLNRCPL QEHFLPRKNS KENLDRFIPN RSAMNFDYAH FALTEERKGK DQSATVSSPS KEAYRKQLAE TMNLNHTRIL AFRNKPQAPV ELLPSNHSAS
101: LHQQPKSVKP RRYIPQTSER TLDAPDIVDD FYLNLLDWGS ANVLAIALDH TVYLWDASTG STSELVTIDE EKGPVTSINW APDGRHVAVG LNNSEVQLWD
201: SASNRQLRTL KGGHQSRVGS LAWNNHILTT GGMDGLIINN DVRIRSPIVE TYRGHTQEVC GLKWSGSGQQ LASGGNDNVV HIWDRSVASS NSTTQWLHRL
301: EEHTSAVKAL AWCPFQANLL ATGGGGGDRT IKFWNTHTGA CLNSVDTGSQ VCSLLWSKNE RELLSSHGFT QNQLTLWKYP SMVKMAELTG HTSRVLYMAQ
401: SPDGCTVASA AGDETLRFWN VFGVPETAKK AAPKAVAEPF SHVNRIR

Arabidopsis Description

CDC20-2Cell division cycle 20.2, cofactor of APC complex [Source:UniProtKB/Swiss-Prot;Acc:Q9S7I8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.