Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- endoplasmic reticulum 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400013474 | Potato | cytosol | 95.22 | 92.02 |
| VIT_16s0013g00280.t01 | Wine grape | nucleus | 63.04 | 63.74 |
| KRH33341 | Soybean | nucleus | 57.39 | 58.41 |
| KRH70386 | Soybean | cytosol | 35.0 | 55.71 |
| GSMUA_Achr10P... | Banana | nucleus | 46.74 | 52.83 |
| GSMUA_Achr11P... | Banana | mitochondrion | 45.22 | 49.29 |
| Solyc08g005420.2.1 | Tomato | nucleus | 40.87 | 41.96 |
| Solyc03g096870.2.1 | Tomato | nucleus | 41.09 | 41.72 |
| Solyc06g072830.2.1 | Tomato | nucleus, plastid | 41.09 | 41.54 |
| Solyc12g056490.1.1 | Tomato | nucleus, plastid | 32.39 | 30.98 |
| Solyc06g043150.2.1 | Tomato | nucleus, plastid | 33.48 | 30.86 |
| Solyc08g080080.2.1 | Tomato | nucleus, plastid | 32.17 | 30.77 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | InterPro:Apc4_WD40_dom | InterPro:Cdc20/Fizzy | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010997 |
| GO:GO:0019538 | GO:GO:0030234 | GO:GO:0097027 | GO:GO:1904668 | InterPro:IPR001680 | InterPro:IPR015943 |
| InterPro:IPR017986 | UniProt:K4BIU6 | PFAM:PF00400 | PFAM:PF12894 | ScanProsite:PS00678 | PFscan:PS50082 |
| PFscan:PS50294 | PANTHER:PTHR19918 | PANTHER:PTHR19918:SF15 | SMART:SM00320 | SUPFAM:SSF50978 | EnsemblPlantsGene:Solyc03g095210.1 |
| EnsemblPlants:Solyc03g095210.1.1 | UniParc:UPI0002767681 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom |
| InterPro:WD40_repeat_dom_sf | : | : | : | : | : |
Description
No Description!
Coordinates
chr3:-:56174140..56176148
Molecular Weight (calculated)
51952.4 Da
IEP (calculated)
8.545
GRAVY (calculated)
-0.528
Length
460 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDNSLTKIQ PDWYSPTRLH DTPLDYDFPG DRFIPNRSLM DLHQAHTLLT NRTNNKLQKP NFNDEYRRKM EESLKLDVEG RPFRMLVFRG SPKWSRNSTR
101: LIDEMRRSDK EIPLQINENR RYRKFPLKAI RALDAPLLSD DYYSNVMDWG KSNILAVVLG SILYIWNAQV QKAAVLMEVK REDDCPTSVA WSDDGKIVAV
201: GCDSSKLQLW DAETSRLVRD LQGHQSRVGC VAWKGHVLTS GSKDRAIINH DVRARSNLVS VTRAHRGEVC GVKWSSTGNA LASGGNDNLV YIWDSFKMSS
301: RHYTHRFNEH QAAVKALAWC PYSSDVLASG GGIDDGCLKI WNTQKGTCIS TNETGAQICG LQWNRHHKEI LSGHGFGRGE SHCQLCLWSY PSMARIGEPL
401: RHASSSRILH LSQSPDGLTV VSAGADETLR FWEIFGPPQE SSENVTHLDN LLSFKASAVR
101: LIDEMRRSDK EIPLQINENR RYRKFPLKAI RALDAPLLSD DYYSNVMDWG KSNILAVVLG SILYIWNAQV QKAAVLMEVK REDDCPTSVA WSDDGKIVAV
201: GCDSSKLQLW DAETSRLVRD LQGHQSRVGC VAWKGHVLTS GSKDRAIINH DVRARSNLVS VTRAHRGEVC GVKWSSTGNA LASGGNDNLV YIWDSFKMSS
301: RHYTHRFNEH QAAVKALAWC PYSSDVLASG GGIDDGCLKI WNTQKGTCIS TNETGAQICG LQWNRHHKEI LSGHGFGRGE SHCQLCLWSY PSMARIGEPL
401: RHASSSRILH LSQSPDGLTV VSAGADETLR FWEIFGPPQE SSENVTHLDN LLSFKASAVR
001: MDAGLNRCPL QEHFLPRKNS KENLDRFIPN RSAMNFDYAH FALTEERKGK DQSATVSSPS KEAYRKQLAE TMNLNHTRIL AFRNKPQAPV ELLPSNHSAS
101: LHQQPKSVKP RRYIPQTSER TLDAPDIVDD FYLNLLDWGS ANVLAIALDH TVYLWDASTG STSELVTIDE EKGPVTSINW APDGRHVAVG LNNSEVQLWD
201: SASNRQLRTL KGGHQSRVGS LAWNNHILTT GGMDGLIINN DVRIRSPIVE TYRGHTQEVC GLKWSGSGQQ LASGGNDNVV HIWDRSVASS NSTTQWLHRL
301: EEHTSAVKAL AWCPFQANLL ATGGGGGDRT IKFWNTHTGA CLNSVDTGSQ VCSLLWSKNE RELLSSHGFT QNQLTLWKYP SMVKMAELTG HTSRVLYMAQ
401: SPDGCTVASA AGDETLRFWN VFGVPETAKK AAPKAVAEPF SHVNRIR
101: LHQQPKSVKP RRYIPQTSER TLDAPDIVDD FYLNLLDWGS ANVLAIALDH TVYLWDASTG STSELVTIDE EKGPVTSINW APDGRHVAVG LNNSEVQLWD
201: SASNRQLRTL KGGHQSRVGS LAWNNHILTT GGMDGLIINN DVRIRSPIVE TYRGHTQEVC GLKWSGSGQQ LASGGNDNVV HIWDRSVASS NSTTQWLHRL
301: EEHTSAVKAL AWCPFQANLL ATGGGGGDRT IKFWNTHTGA CLNSVDTGSQ VCSLLWSKNE RELLSSHGFT QNQLTLWKYP SMVKMAELTG HTSRVLYMAQ
401: SPDGCTVASA AGDETLRFWN VFGVPETAKK AAPKAVAEPF SHVNRIR
Arabidopsis Description
CDC20-2Cell division cycle 20.2, cofactor of APC complex [Source:UniProtKB/Swiss-Prot;Acc:Q9S7I8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.