Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG96235 | Soybean | nucleus | 92.36 | 48.54 |
| KRH67979 | Soybean | nucleus | 90.97 | 47.81 |
| KRH25294 | Soybean | nucleus | 68.06 | 35.25 |
| KRH30376 | Soybean | nucleus | 68.06 | 34.51 |
| VIT_08s0007g02570.t01 | Wine grape | nucleus | 68.06 | 34.27 |
| KRH26669 | Soybean | endoplasmic reticulum, golgi | 68.06 | 31.72 |
| KRH22647 | Soybean | endoplasmic reticulum, vacuole | 63.19 | 29.17 |
| KRH52356 | Soybean | nucleus | 54.86 | 28.94 |
| KRH61689 | Soybean | nucleus | 54.86 | 28.94 |
| KRH47360 | Soybean | nucleus | 53.47 | 27.8 |
| KRH44539 | Soybean | cytosol | 53.47 | 27.4 |
| KRH28796 | Soybean | nucleus | 9.03 | 13.27 |
Protein Annotations
| EMBL:ACUP02005947 | EnsemblPlants:KRH39619 | EnsemblPlantsGene:GLYMA_09G209800 | Gene3D:3.30.420.10 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR036397 | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | PANTHER:PTHR10797 | PANTHER:PTHR10797:SF10 |
| ProteinID:KRH39619 | ProteinID:KRH39619.1 | SUPFAM:SSF53098 | UniParc:UPI0006EDA5C8 | UniProt:A0A0R0IH89 | MapMan:35.1 |
Description
hypothetical protein
Coordinates
chr9:+:43411018..43411482
Molecular Weight (calculated)
16917.3 Da
IEP (calculated)
6.716
GRAVY (calculated)
-0.106
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRFHLIQIG LTLSDNAGNL PILGNSNAFI WEFNFRDFNV TRDAHAHDSV ELLRRQGIDF EKNRDFGIDS FWFAELMMSS VTFHSAYDFR YLVKLLTHRA
101: LPEELREFLC LVRVFFGDKV FDVKHLMRFC SNLHGGLDRV CQSH
101: LPEELREFLC LVRVFFGDKV FDVKHLMRFC SNLHGGLDRV CQSH
001: MSLFLKDDSI QIREVWNDNL ESEMALIREV VDDFPFVAMD TEFPGIVCRP VGTFKTNTEY HYETLKTNVN ILKMIQLGLT FSDEKGNLPT CGTDNKYCIW
101: QFNFREFDLE SDIYATDSIE LLRQSGIDFV KNNEFGIDSK RFAELLMSSG IVLNENVHWV TFHSGYDFGY LLKLLTCQNL PETQTGFFEM ISVYFPRVYD
201: IKHLMKFCNS LHGGLNKLAE LLDVERVGIC HQAGSDSLLT SCTFRKLQEN FFIGSMEKYS GVLYGLGVEN GQIVH
101: QFNFREFDLE SDIYATDSIE LLRQSGIDFV KNNEFGIDSK RFAELLMSSG IVLNENVHWV TFHSGYDFGY LLKLLTCQNL PETQTGFFEM ISVYFPRVYD
201: IKHLMKFCNS LHGGLNKLAE LLDVERVGIC HQAGSDSLLT SCTFRKLQEN FFIGSMEKYS GVLYGLGVEN GQIVH
Arabidopsis Description
CAF1-7Probable CCR4-associated factor 1 homolog 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKZ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.