Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
- cytosol 1
- mitochondrion 1
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G44260.1 | KRH52586 | AT1G22920.1 | 21798944 |
| AT3G44260.1 | KRH61926 | AT1G22920.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH22647 | Soybean | endoplasmic reticulum, vacuole | 86.41 | 85.58 |
| KRH25294 | Soybean | nucleus | 70.87 | 78.78 |
| CDX70991 | Canola | cytosol, nucleus, plastid | 31.72 | 77.17 |
| VIT_06s0080g01090.t01 | Wine grape | nucleus | 68.28 | 75.9 |
| KRH30376 | Soybean | nucleus | 69.58 | 75.7 |
| Bra035002.1-P | Field mustard | nucleus | 62.46 | 71.22 |
| CDY47299 | Canola | nucleus | 62.14 | 70.59 |
| CDY35673 | Canola | nucleus | 60.84 | 69.63 |
| CDY09125 | Canola | nucleus | 60.84 | 69.63 |
| CDY08688 | Canola | cytosol | 62.78 | 69.53 |
| AT5G22250.1 | Thale cress | cytosol | 62.14 | 69.06 |
| AT3G44260.1 | Thale cress | cytosol | 62.46 | 68.93 |
| Bra020179.1-P | Field mustard | nucleus | 59.87 | 68.52 |
| CDX92371 | Canola | nucleus | 62.46 | 68.2 |
| KRH39619 | Soybean | cytosol, nucleus, plastid | 31.72 | 68.06 |
| CDX98586 | Canola | nucleus | 61.81 | 67.49 |
| Bra002400.1-P | Field mustard | nucleus | 60.84 | 66.9 |
| KRH67979 | Soybean | nucleus | 58.25 | 65.69 |
| KRG96235 | Soybean | nucleus | 58.25 | 65.69 |
| CDX88806 | Canola | cytosol | 60.52 | 65.61 |
| Bra006616.1-P | Field mustard | cytosol | 60.19 | 65.26 |
| GSMUA_Achr9P29700_001 | Banana | cytosol | 41.75 | 60.56 |
| GSMUA_Achr6P19460_001 | Banana | cytosol | 32.36 | 57.8 |
| GSMUA_Achr6P19450_001 | Banana | cytosol | 45.63 | 57.79 |
| PGSC0003DMT400042215 | Potato | plastid | 51.46 | 55.79 |
| KRH61689 | Soybean | nucleus | 48.87 | 55.31 |
| Solyc01g007840.2.1 | Tomato | plastid | 50.49 | 54.74 |
| KRH52356 | Soybean | nucleus | 48.22 | 54.58 |
| KRH47360 | Soybean | nucleus | 48.54 | 54.15 |
| KRH44539 | Soybean | cytosol | 47.57 | 52.31 |
| KRH28796 | Soybean | nucleus | 15.53 | 48.98 |
| Zm00001d026657_P001 | Maize | cytosol | 44.34 | 45.82 |
| Zm00001d001774_P001 | Maize | nucleus | 43.69 | 45.45 |
| GSMUA_Achr8P18010_001 | Banana | mitochondrion | 36.25 | 43.24 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 35.92 | 43.19 |
| TraesCS2D01G597200.1 | Wheat | nucleus | 45.31 | 42.81 |
| Os04t0684900-02 | Rice | nucleus | 45.31 | 42.55 |
| TraesCS2B01G603600.1 | Wheat | cytosol | 44.66 | 42.46 |
| TraesCS2A01G583000.1 | Wheat | nucleus | 44.34 | 42.28 |
| EES11684 | Sorghum | nucleus | 44.66 | 41.19 |
| HORVU2Hr1G123480.1 | Barley | nucleus | 43.04 | 40.92 |
| TraesCSU01G062600.1 | Wheat | cytosol | 30.42 | 36.58 |
| TraesCS7D01G075800.1 | Wheat | nucleus | 30.42 | 36.43 |
| Zm00001d007662_P001 | Maize | extracellular, nucleus, plastid | 15.21 | 36.15 |
| Zm00001d007664_P001 | Maize | extracellular, nucleus, plastid | 15.21 | 36.15 |
| Zm00001d007669_P001 | Maize | extracellular, nucleus, plastid | 15.21 | 36.15 |
| Zm00001d007666_P001 | Maize | extracellular, nucleus, plastid | 15.86 | 35.77 |
| Os10t0123900-00 | Rice | extracellular, mitochondrion, nucleus | 30.1 | 33.82 |
| EER87806 | Sorghum | cytosol, nucleus, plasma membrane | 33.01 | 32.28 |
| Os10t0124200-00 | Rice | cytosol | 30.74 | 32.2 |
| TraesCS3B01G424000.1 | Wheat | cytosol | 21.04 | 31.55 |
| Zm00001d048752_P001 | Maize | nucleus, plasma membrane, plastid | 29.77 | 31.29 |
| Zm00001d048754_P001 | Maize | nucleus, plasma membrane, plastid | 29.77 | 31.29 |
| TraesCS7B01G235700.1 | Wheat | cytosol | 26.54 | 31.18 |
| Zm00001d048746_P001 | Maize | nucleus, plasma membrane, plastid | 29.45 | 31.16 |
| Zm00001d048757_P001 | Maize | nucleus, plasma membrane, plastid | 29.45 | 31.16 |
| TraesCS3D01G384800.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 17.48 | 31.03 |
| TraesCS7A01G347500.1 | Wheat | cytosol | 26.54 | 30.94 |
| Zm00001d007654_P001 | Maize | nucleus, plasma membrane, plastid | 28.8 | 30.9 |
| Zm00001d048748_P001 | Maize | nucleus, plasma membrane, plastid | 29.13 | 30.72 |
| TraesCS7D01G331400.1 | Wheat | cytosol | 25.89 | 30.42 |
| TraesCS7A01G347600.1 | Wheat | cytosol | 25.89 | 30.3 |
| EES10179 | Sorghum | plasma membrane, plastid | 27.51 | 30.25 |
| Os10t0128300-00 | Rice | plastid | 28.16 | 29.9 |
| Zm00001d002885_P001 | Maize | plastid | 30.42 | 29.47 |
| Os06t0138400-00 | Rice | nucleus, peroxisome, plastid | 35.6 | 29.33 |
| TraesCS3A01G411800.1 | Wheat | mitochondrion, plastid | 28.16 | 29.0 |
| TraesCS3D01G406100.1 | Wheat | nucleus, plasma membrane, plastid | 26.54 | 28.98 |
| Os06t0503900-01 | Rice | cytosol, nucleus, plasma membrane | 26.21 | 28.83 |
| TraesCS6D01G318000.1 | Wheat | plastid | 25.57 | 27.92 |
| KXG20050 | Sorghum | plastid | 23.95 | 27.51 |
| TraesCS4B01G071200.1 | Wheat | plastid | 26.21 | 26.91 |
| TraesCS4B01G071000.1 | Wheat | plastid | 25.57 | 26.78 |
| TraesCS4A01G243900.1 | Wheat | plastid | 25.89 | 26.58 |
| TraesCS4D01G069900.1 | Wheat | plastid | 25.89 | 26.49 |
| TraesCS4B01G071100.1 | Wheat | plastid | 25.89 | 26.49 |
| TraesCS4A01G243700.1 | Wheat | plastid | 25.24 | 26.17 |
| TraesCS4A01G243800.1 | Wheat | plastid | 25.24 | 26.17 |
| TraesCS3B01G444600.1 | Wheat | mitochondrion | 25.24 | 26.09 |
| EES09326 | Sorghum | mitochondrion, nucleus | 24.92 | 25.84 |
| OQU83919 | Sorghum | mitochondrion | 20.39 | 25.82 |
| TraesCS3B01G445400.1 | Wheat | plastid | 26.86 | 25.08 |
| Os07t0169800-00 | Rice | nucleus | 38.84 | 24.0 |
| TraesCS7A01G082100.1 | Wheat | nucleus | 33.66 | 23.8 |
| KXG22837 | Sorghum | mitochondrion | 26.21 | 23.41 |
| OQU76452 | Sorghum | plastid | 12.3 | 23.31 |
| OQU83918 | Sorghum | cytosol, extracellular, nucleus | 13.59 | 22.34 |
| Zm00001d031508_P001 | Maize | cytosol | 28.48 | 22.34 |
| KXG38897 | Sorghum | plastid | 24.6 | 22.29 |
| Zm00001d029981_P001 | Maize | plastid | 25.89 | 21.56 |
| Zm00001d007893_P001 | Maize | nucleus | 34.3 | 21.24 |
| OQU76454 | Sorghum | plastid | 13.27 | 20.2 |
| EER98038 | Sorghum | plastid | 36.25 | 19.44 |
| OQU76453 | Sorghum | plastid | 14.24 | 14.62 |
Protein Annotations
| MapMan:16.8.2.1.2.2 | Gene3D:3.30.420.10 | EMBL:ACUP02007734 | EnsemblPlantsGene:GLYMA_12G187400 | GO:GO:0000932 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004535 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0017148 |
| GO:GO:0019538 | GO:GO:0030015 | GO:GO:0043928 | GO:GO:0090503 | UniProt:I1LTY5 | InterPro:IPR036397 |
| EnsemblPlants:KRH26669 | ProteinID:KRH26669 | ProteinID:KRH26669.1 | PFAM:PF04857 | PANTHER:PTHR10797 | PANTHER:PTHR10797:SF3 |
| InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | InterPro:RNase_CAF1 | SUPFAM:SSF53098 | SignalP:SignalP-noTM | UniParc:UPI000233D754 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr12:+:34850968..34852441
Molecular Weight (calculated)
35312.3 Da
IEP (calculated)
6.647
GRAVY (calculated)
-0.112
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MISPQTRHSF GSLLLLFLVL LQKRFQMGLL EENPNHSKTI LIREVWASNL ESEFQLIRQV IDDYPFISMD TEFPGVVFRP HTVDPTKPYL PPSVHYRFLK
101: SNVDALNLIQ IGLTLSDSNG NLPHLGTANR FIWEFNFRDF DVERDAHAPD SIDLLRRQGI DFRRNAAEGV DSYLFAELVM SSGLVCNDSV SWVTFHSAYD
201: FGYLVKILTR RSLPSGLEEF LNMLRAFFGN NVYDIKHMMR FCDTLHGGLD RLARTLNVDR AVGKCHQAGS DSLLTWHAFQ KMRDIYFVTD GPQKHAGVLF
301: GLELTCSTS
101: SNVDALNLIQ IGLTLSDSNG NLPHLGTANR FIWEFNFRDF DVERDAHAPD SIDLLRRQGI DFRRNAAEGV DSYLFAELVM SSGLVCNDSV SWVTFHSAYD
201: FGYLVKILTR RSLPSGLEEF LNMLRAFFGN NVYDIKHMMR FCDTLHGGLD RLARTLNVDR AVGKCHQAGS DSLLTWHAFQ KMRDIYFVTD GPQKHAGVLF
301: GLELTCSTS
001: MIKSEADLSD VIVIRDVWAY NLESEFDLIR GIVEDYPFIS MDTEFPGVIY KADLDVLRRG NPNYLYNLLK SNVDALSLIQ VGLTLSDADG NLPDLGGQKN
101: RRYIWEFNFR DFDVERDPHA PDSIELLRRH GIDFERNRRE GVESERFAEL MMSSGLICNE SVSWVTFHSA YDFGYLVKIL TRRQLPVALR EFLGLLRAFF
201: GDRVYDVKHI MRFCEQRLYG GLDRVARSLE VNRAVGKCHQ AGSDSLLTWQ AFQRMRDLYF VEDGAEKHAG VLYGLEVF
101: RRYIWEFNFR DFDVERDPHA PDSIELLRRH GIDFERNRRE GVESERFAEL MMSSGLICNE SVSWVTFHSA YDFGYLVKIL TRRQLPVALR EFLGLLRAFF
201: GDRVYDVKHI MRFCEQRLYG GLDRVARSLE VNRAVGKCHQ AGSDSLLTWQ AFQRMRDLYF VEDGAEKHAG VLYGLEVF
Arabidopsis Description
CAF1-11Probable CCR4-associated factor 1 homolog 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMS6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.