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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY09125 Canola nucleus 96.67 96.67
Bra002400.1-P Field mustard nucleus 87.04 83.63
Bra006616.1-P Field mustard cytosol 86.67 82.11
Bra035002.1-P Field mustard nucleus 80.0 79.7
VIT_06s0080g01090.t01 Wine grape nucleus 72.96 70.86
KRH30376 Soybean nucleus 70.0 66.55
KRH25294 Soybean nucleus 67.78 65.83
GSMUA_Achr9P29700_001 Banana cytosol 48.52 61.5
GSMUA_Achr6P19460_001 Banana cytosol 38.52 60.12
KRH26669 Soybean endoplasmic reticulum, golgi 68.52 59.87
GSMUA_Achr6P19450_001 Banana cytosol 54.07 59.84
KRH22647 Soybean endoplasmic reticulum, vacuole 68.15 58.97
Solyc01g007840.2.1 Tomato plastid 62.22 58.95
PGSC0003DMT400042215 Potato plastid 62.22 58.95
Bra005614.1-P Field mustard nucleus 52.22 51.09
Bra006083.1-P Field mustard nucleus 51.85 50.36
Bra009001.1-P Field mustard nucleus 51.48 49.64
Bra008439.1-P Field mustard nucleus 50.0 49.27
Bra035152.1-P Field mustard cytosol 49.63 48.73
Zm00001d001774_P001 Maize nucleus 51.48 46.8
Bra026093.1-P Field mustard nucleus 51.48 46.49
Zm00001d026657_P001 Maize cytosol 51.48 46.49
GSMUA_Achr8P18010_001 Banana mitochondrion 42.22 44.02
GSMUA_AchrUn_... Banana mitochondrion 41.11 43.19
Os04t0684900-02 Rice nucleus 52.59 43.16
TraesCS2D01G597200.1 Wheat nucleus 50.37 41.59
TraesCS2A01G583000.1 Wheat nucleus 49.26 41.05
TraesCS2B01G603600.1 Wheat cytosol 49.26 40.92
HORVU2Hr1G123480.1 Barley nucleus 49.26 40.92
EES11684 Sorghum nucleus 50.74 40.9
TraesCSU01G062600.1 Wheat cytosol 37.04 38.91
TraesCS7D01G075800.1 Wheat nucleus 36.3 37.98
Zm00001d007662_P001 Maize extracellular, nucleus, plastid 17.78 36.92
Zm00001d007669_P001 Maize extracellular, nucleus, plastid 17.78 36.92
Zm00001d007664_P001 Maize extracellular, nucleus, plastid 17.78 36.92
Zm00001d007666_P001 Maize extracellular, nucleus, plastid 18.15 35.77
TraesCS3D01G384800.1 Wheat cytosol, mitochondrion, nucleus, plasma membrane 22.59 35.06
Os10t0123900-00 Rice extracellular, mitochondrion, nucleus 35.19 34.55
TraesCS7A01G347500.1 Wheat cytosol 32.59 33.21
TraesCS7A01G347600.1 Wheat cytosol 31.85 32.58
TraesCS3B01G424000.1 Wheat cytosol 24.81 32.52
Os10t0124200-00 Rice cytosol 35.19 32.2
EER87806 Sorghum cytosol, nucleus, plasma membrane 37.41 31.96
TraesCS7B01G235700.1 Wheat cytosol 30.74 31.56
KXG20050 Sorghum plastid 31.11 31.23
TraesCS7D01G331400.1 Wheat cytosol 30.37 31.18
TraesCS6D01G318000.1 Wheat plastid 32.22 30.74
Zm00001d048752_P001 Maize nucleus, plasma membrane, plastid 33.33 30.61
Zm00001d048754_P001 Maize nucleus, plasma membrane, plastid 33.33 30.61
EES10179 Sorghum plasma membrane, plastid 31.85 30.61
Zm00001d048757_P001 Maize nucleus, plasma membrane, plastid 32.96 30.48
TraesCS3D01G406100.1 Wheat nucleus, plasma membrane, plastid 31.85 30.39
Os10t0128300-00 Rice plastid 32.59 30.24
Zm00001d007654_P001 Maize nucleus, plasma membrane, plastid 32.22 30.21
Zm00001d048746_P001 Maize nucleus, plasma membrane, plastid 32.59 30.14
TraesCS3A01G411800.1 Wheat mitochondrion, plastid 33.33 30.0
Zm00001d048748_P001 Maize nucleus, plasma membrane, plastid 32.22 29.69
Os06t0138400-00 Rice nucleus, peroxisome, plastid 40.74 29.33
Os06t0503900-01 Rice cytosol, nucleus, plasma membrane 30.37 29.18
TraesCS4A01G243700.1 Wheat plastid 31.11 28.19
TraesCS3B01G444600.1 Wheat mitochondrion 31.11 28.09
TraesCS4D01G069900.1 Wheat plastid 31.11 27.81
Zm00001d002885_P001 Maize plastid 32.59 27.59
TraesCS4B01G071200.1 Wheat plastid 30.74 27.57
TraesCS4A01G243900.1 Wheat plastid 30.74 27.57
TraesCS4A01G243800.1 Wheat plastid 30.37 27.52
TraesCS4B01G071000.1 Wheat plastid 30.0 27.46
EES09326 Sorghum mitochondrion, nucleus 30.0 27.18
TraesCS4B01G071100.1 Wheat plastid 30.0 26.82
OQU83919 Sorghum mitochondrion 23.7 26.23
TraesCS3B01G445400.1 Wheat plastid 31.85 25.98
TraesCS7A01G082100.1 Wheat nucleus 40.74 25.17
Os07t0169800-00 Rice nucleus 45.93 24.8
Bra032421.1-P Field mustard cytosol, mitochondrion, nucleus 33.7 24.8
OQU76452 Sorghum plastid 14.81 24.54
KXG38897 Sorghum plastid 30.74 24.34
KXG22837 Sorghum mitochondrion 30.37 23.7
Zm00001d029981_P001 Maize plastid 32.22 23.45
OQU76454 Sorghum plastid 17.04 22.66
Zm00001d031508_P001 Maize cytosol 32.59 22.34
OQU83918 Sorghum cytosol, extracellular, nucleus 15.19 21.81
Zm00001d007893_P001 Maize nucleus 38.52 20.84
EER98038 Sorghum plastid 42.59 19.97
OQU76453 Sorghum plastid 17.04 15.28
Bra023214.1-P Field mustard cytosol 25.56 12.5
Protein Annotations
EnsemblPlants:Bra020179.1EnsemblPlants:Bra020179.1-PEnsemblPlantsGene:Bra020179Gene3D:3.30.420.10GO:GO:0003674GO:GO:0003676
GO:GO:0005488InterPro:IPR036397InterPro:RNaseH-like_sfInterPro:RNaseH_sfInterPro:RNase_CAF1PANTHER:PTHR10797
PANTHER:PTHR10797:SF3PFAM:PF04857SEG:segSUPFAM:SSF53098UniParc:UPI0002543492UniProt:M4DUI6
MapMan:16.8.2.1.2.2:::::
Description
AT5G22250 (E=5e-130) | CCR4-NOT transcription complex protein, putative
Coordinates
chrA02:-:5430824..5431636
Molecular Weight (calculated)
30791.8 Da
IEP (calculated)
5.431
GRAVY (calculated)
-0.166
Length
270 amino acids
Sequence
(BLAST)
001: MITPSVVVRD VWADNLESEF ELISGIVEDF PFISMDTEFP GVIYKADLRR LNPGYLYKLL KSNVDALSLI QVGLTLSDAD GNLPDLGGGG GGSRFIWEFN
101: FRDFDVDRDP HAPDSIELLR RHGIDFDRNR SDGVEAKRFA ELMVSSGLIC NESVSWVTFH SAYDFGYLVK ILTRRELPGS LGEFLRLLRA FFGERVYDVK
201: HMMRFCERRL FGGLDRVARS LEVNREVGKC HQAGSDSLLT WQAFRRMRDL YFVKDGPEKH AGVLYGLEVF
Best Arabidopsis Sequence Match ( AT5G22250.1 )
(BLAST)
001: MIKSEADLSD VIVIRDVWAY NLESEFDLIR GIVEDYPFIS MDTEFPGVIY KADLDVLRRG NPNYLYNLLK SNVDALSLIQ VGLTLSDADG NLPDLGGQKN
101: RRYIWEFNFR DFDVERDPHA PDSIELLRRH GIDFERNRRE GVESERFAEL MMSSGLICNE SVSWVTFHSA YDFGYLVKIL TRRQLPVALR EFLGLLRAFF
201: GDRVYDVKHI MRFCEQRLYG GLDRVARSLE VNRAVGKCHQ AGSDSLLTWQ AFQRMRDLYF VEDGAEKHAG VLYGLEVF
Arabidopsis Description
CAF1-11Probable CCR4-associated factor 1 homolog 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMS6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.