Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
- cytosol 1
- mitochondrion 1
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G44260.1 | KRH52586 | AT1G22920.1 | 21798944 |
| AT3G44260.1 | KRH61926 | AT1G22920.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH26669 | Soybean | endoplasmic reticulum, golgi | 85.58 | 86.41 |
| KRH25294 | Soybean | nucleus | 72.44 | 81.3 |
| KRH30376 | Soybean | nucleus | 70.19 | 77.11 |
| CDX70991 | Canola | cytosol, nucleus, plastid | 30.77 | 75.59 |
| VIT_06s0080g01090.t01 | Wine grape | nucleus | 66.03 | 74.1 |
| Bra035002.1-P | Field mustard | nucleus | 61.54 | 70.85 |
| CDY47299 | Canola | nucleus | 60.58 | 69.49 |
| CDY09125 | Canola | nucleus | 59.62 | 68.89 |
| CDY35673 | Canola | nucleus | 59.62 | 68.89 |
| CDY08688 | Canola | cytosol | 61.22 | 68.46 |
| Bra020179.1-P | Field mustard | nucleus | 58.97 | 68.15 |
| CDX92371 | Canola | nucleus | 61.22 | 67.49 |
| AT5G22250.1 | Thale cress | cytosol | 59.94 | 67.27 |
| AT3G44260.1 | Thale cress | cytosol | 59.94 | 66.79 |
| CDX98586 | Canola | nucleus | 60.58 | 66.78 |
| Bra002400.1-P | Field mustard | nucleus | 59.62 | 66.19 |
| Bra006616.1-P | Field mustard | cytosol | 59.62 | 65.26 |
| CDX88806 | Canola | cytosol | 59.62 | 65.26 |
| KRH39619 | Soybean | cytosol, nucleus, plastid | 29.17 | 63.19 |
| KRH67979 | Soybean | nucleus | 54.49 | 62.04 |
| KRG96235 | Soybean | nucleus | 54.49 | 62.04 |
| GSMUA_Achr9P29700_001 | Banana | cytosol | 41.35 | 60.56 |
| GSMUA_Achr6P19450_001 | Banana | cytosol | 45.51 | 58.2 |
| GSMUA_Achr6P19460_001 | Banana | cytosol | 31.41 | 56.65 |
| PGSC0003DMT400042215 | Potato | plastid | 51.28 | 56.14 |
| Solyc01g007840.2.1 | Tomato | plastid | 50.32 | 55.09 |
| KRH52356 | Soybean | nucleus | 47.44 | 54.21 |
| KRH61689 | Soybean | nucleus | 47.44 | 54.21 |
| KRH47360 | Soybean | nucleus | 46.47 | 52.35 |
| KRH44539 | Soybean | cytosol | 45.83 | 50.89 |
| KRH28796 | Soybean | nucleus | 15.38 | 48.98 |
| Zm00001d026657_P001 | Maize | cytosol | 41.67 | 43.48 |
| GSMUA_Achr8P18010_001 | Banana | mitochondrion | 35.9 | 43.24 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 35.58 | 43.19 |
| Zm00001d001774_P001 | Maize | nucleus | 40.71 | 42.76 |
| Os04t0684900-02 | Rice | nucleus | 44.87 | 42.55 |
| TraesCS2D01G597200.1 | Wheat | nucleus | 42.95 | 40.98 |
| TraesCS2B01G603600.1 | Wheat | cytosol | 42.31 | 40.62 |
| TraesCS2A01G583000.1 | Wheat | nucleus | 41.99 | 40.43 |
| HORVU2Hr1G123480.1 | Barley | nucleus | 41.67 | 40.0 |
| EES11684 | Sorghum | nucleus | 41.67 | 38.81 |
| TraesCS7D01G075800.1 | Wheat | nucleus | 29.81 | 36.05 |
| TraesCSU01G062600.1 | Wheat | cytosol | 29.49 | 35.8 |
| Zm00001d007669_P001 | Maize | extracellular, nucleus, plastid | 14.74 | 35.38 |
| Zm00001d007664_P001 | Maize | extracellular, nucleus, plastid | 14.74 | 35.38 |
| Zm00001d007662_P001 | Maize | extracellular, nucleus, plastid | 14.74 | 35.38 |
| Zm00001d007666_P001 | Maize | extracellular, nucleus, plastid | 15.06 | 34.31 |
| Os10t0123900-00 | Rice | extracellular, mitochondrion, nucleus | 29.81 | 33.82 |
| EER87806 | Sorghum | cytosol, nucleus, plasma membrane | 33.65 | 33.23 |
| TraesCS3D01G384800.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 17.31 | 31.03 |
| Zm00001d048752_P001 | Maize | nucleus, plasma membrane, plastid | 29.17 | 30.95 |
| Zm00001d048754_P001 | Maize | nucleus, plasma membrane, plastid | 29.17 | 30.95 |
| EES10179 | Sorghum | plasma membrane, plastid | 27.56 | 30.61 |
| Os10t0124200-00 | Rice | cytosol | 28.85 | 30.51 |
| Zm00001d048746_P001 | Maize | nucleus, plasma membrane, plastid | 28.53 | 30.48 |
| Zm00001d048757_P001 | Maize | nucleus, plasma membrane, plastid | 28.53 | 30.48 |
| TraesCS3B01G424000.1 | Wheat | cytosol | 19.87 | 30.1 |
| TraesCS7B01G235700.1 | Wheat | cytosol | 25.32 | 30.04 |
| Zm00001d048748_P001 | Maize | nucleus, plasma membrane, plastid | 28.21 | 30.03 |
| Os10t0128300-00 | Rice | plastid | 27.88 | 29.9 |
| Zm00001d007654_P001 | Maize | nucleus, plasma membrane, plastid | 27.56 | 29.86 |
| TraesCS7A01G347500.1 | Wheat | cytosol | 25.0 | 29.43 |
| Os06t0138400-00 | Rice | nucleus, peroxisome, plastid | 35.26 | 29.33 |
| TraesCS7D01G331400.1 | Wheat | cytosol | 24.68 | 29.28 |
| Zm00001d002885_P001 | Maize | plastid | 29.49 | 28.84 |
| TraesCS7A01G347600.1 | Wheat | cytosol | 24.36 | 28.79 |
| TraesCS3A01G411800.1 | Wheat | mitochondrion, plastid | 27.56 | 28.67 |
| TraesCS3D01G406100.1 | Wheat | nucleus, plasma membrane, plastid | 25.96 | 28.62 |
| TraesCS6D01G318000.1 | Wheat | plastid | 25.96 | 28.62 |
| Os06t0503900-01 | Rice | cytosol, nucleus, plasma membrane | 25.64 | 28.47 |
| KXG20050 | Sorghum | plastid | 24.04 | 27.88 |
| TraesCS4B01G071200.1 | Wheat | plastid | 26.6 | 27.57 |
| TraesCS4B01G071000.1 | Wheat | plastid | 25.64 | 27.12 |
| TraesCS4A01G243700.1 | Wheat | plastid | 25.64 | 26.85 |
| TraesCS4D01G069900.1 | Wheat | plastid | 25.96 | 26.82 |
| TraesCS4B01G071100.1 | Wheat | plastid | 25.96 | 26.82 |
| TraesCS4A01G243900.1 | Wheat | plastid | 25.64 | 26.58 |
| TraesCS4A01G243800.1 | Wheat | plastid | 25.32 | 26.51 |
| OQU83919 | Sorghum | mitochondrion | 20.19 | 25.82 |
| TraesCS3B01G444600.1 | Wheat | mitochondrion | 24.68 | 25.75 |
| EES09326 | Sorghum | mitochondrion, nucleus | 24.36 | 25.5 |
| TraesCS3B01G445400.1 | Wheat | plastid | 25.96 | 24.47 |
| KXG22837 | Sorghum | mitochondrion | 26.6 | 23.99 |
| OQU76452 | Sorghum | plastid | 12.5 | 23.93 |
| OQU83918 | Sorghum | cytosol, extracellular, nucleus | 14.1 | 23.4 |
| TraesCS7A01G082100.1 | Wheat | nucleus | 32.69 | 23.34 |
| Os07t0169800-00 | Rice | nucleus | 36.22 | 22.6 |
| KXG38897 | Sorghum | plastid | 24.36 | 22.29 |
| Zm00001d031508_P001 | Maize | cytosol | 27.56 | 21.83 |
| Zm00001d029981_P001 | Maize | plastid | 25.32 | 21.29 |
| OQU76454 | Sorghum | plastid | 13.46 | 20.69 |
| Zm00001d007893_P001 | Maize | nucleus | 32.69 | 20.44 |
| EER98038 | Sorghum | plastid | 33.65 | 18.23 |
| OQU76453 | Sorghum | plastid | 13.78 | 14.29 |
Protein Annotations
| EntrezGene:100781759 | MapMan:16.8.2.1.2.2 | Gene3D:3.30.420.10 | EMBL:ACUP02008424 | EnsemblPlantsGene:GLYMA_13G314100 | GO:GO:0000932 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004535 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0017148 | GO:GO:0019538 | GO:GO:0030015 | GO:GO:0043928 | GO:GO:0090503 | UniProt:I1M4A3 |
| InterPro:IPR036397 | EnsemblPlants:KRH22647 | ProteinID:KRH22647 | ProteinID:KRH22647.1 | PFAM:PF04857 | PANTHER:PTHR10797 |
| PANTHER:PTHR10797:SF3 | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | InterPro:RNase_CAF1 | SUPFAM:SSF53098 | SignalP:SignalP-noTM |
| UniParc:UPI000233C09C | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:-:40937254..40938477
Molecular Weight (calculated)
35958.1 Da
IEP (calculated)
5.827
GRAVY (calculated)
-0.104
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MISPQTKQSF GSLFLLFLVL LQKRFEMGVI VENPNSSKPI VIREVWASNL ESEFEVIREV IDDYPFISMD TEFPGVVFRP HVVDPTKPYL FRLRPSDHYR
101: FLKFNVDALN LIQVGITLSD ADGNLPHLET GNRFIWEFNF RDFDIDRDDY ASDSIDLLRR QGIDFRRNTA EGIDSNLFAE LVMSSGLVCN DSVSWVTFHS
201: AYDFGYLVKI LTRRNLPNGL EEFLKMLRAF FGNNVYDIKH MMQFCDTLYG GLDRLARTLN VDRAVGKCHQ AGSDSLLTWH VFQKMRDIYF VKDGPHKHVG
301: VLFGLELTCS AP
101: FLKFNVDALN LIQVGITLSD ADGNLPHLET GNRFIWEFNF RDFDIDRDDY ASDSIDLLRR QGIDFRRNTA EGIDSNLFAE LVMSSGLVCN DSVSWVTFHS
201: AYDFGYLVKI LTRRNLPNGL EEFLKMLRAF FGNNVYDIKH MMQFCDTLYG GLDRLARTLN VDRAVGKCHQ AGSDSLLTWH VFQKMRDIYF VKDGPHKHVG
301: VLFGLELTCS AP
001: MIKSEADLSD VIVIRDVWAY NLESEFDLIR GIVEDYPFIS MDTEFPGVIY KADLDVLRRG NPNYLYNLLK SNVDALSLIQ VGLTLSDADG NLPDLGGQKN
101: RRYIWEFNFR DFDVERDPHA PDSIELLRRH GIDFERNRRE GVESERFAEL MMSSGLICNE SVSWVTFHSA YDFGYLVKIL TRRQLPVALR EFLGLLRAFF
201: GDRVYDVKHI MRFCEQRLYG GLDRVARSLE VNRAVGKCHQ AGSDSLLTWQ AFQRMRDLYF VEDGAEKHAG VLYGLEVF
101: RRYIWEFNFR DFDVERDPHA PDSIELLRRH GIDFERNRRE GVESERFAEL MMSSGLICNE SVSWVTFHSA YDFGYLVKIL TRRQLPVALR EFLGLLRAFF
201: GDRVYDVKHI MRFCEQRLYG GLDRVARSLE VNRAVGKCHQ AGSDSLLTWQ AFQRMRDLYF VEDGAEKHAG VLYGLEVF
Arabidopsis Description
CAF1-11Probable CCR4-associated factor 1 homolog 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMS6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.