Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d018378_P001 | Maize | nucleus | 33.67 | 41.77 |
| KRH61689 | Soybean | nucleus | 84.69 | 30.4 |
| KRH52356 | Soybean | nucleus | 83.67 | 30.04 |
| VIT_04s0008g05850.t01 | Wine grape | nucleus | 73.47 | 26.37 |
| PGSC0003DMT400058833 | Potato | cytosol | 71.43 | 25.55 |
| KRH47360 | Soybean | nucleus | 70.41 | 24.91 |
| Solyc11g045130.1.1 | Tomato | cytosol | 68.37 | 24.45 |
| KRH44539 | Soybean | cytosol | 69.39 | 24.2 |
| CDX70376 | Canola | nucleus | 65.31 | 23.19 |
| CDX69796 | Canola | nucleus | 65.31 | 23.02 |
| CDX97069 | Canola | nucleus | 65.31 | 22.86 |
| Bra009001.1-P | Field mustard | nucleus | 65.31 | 22.86 |
| CDX78405 | Canola | nucleus | 64.29 | 22.66 |
| Bra006083.1-P | Field mustard | nucleus | 64.29 | 22.66 |
| Bra035152.1-P | Field mustard | cytosol | 61.22 | 21.82 |
| CDX87343 | Canola | cytosol | 61.22 | 21.82 |
| CDY39943 | Canola | cytosol | 61.22 | 21.82 |
| Os09t0416800-01 | Rice | cytosol | 62.24 | 21.79 |
| AT5G10960.1 | Thale cress | nucleus | 61.22 | 21.66 |
| Bra008439.1-P | Field mustard | nucleus | 60.2 | 21.53 |
| CDY53227 | Canola | nucleus | 60.2 | 21.53 |
| CDY63973 | Canola | nucleus | 60.2 | 21.53 |
| TraesCS5A01G225900.1 | Wheat | cytosol | 60.2 | 21.15 |
| TraesCS5B01G224400.1 | Wheat | cytosol | 60.2 | 21.15 |
| TraesCS5D01G233200.1 | Wheat | cytosol | 60.2 | 21.15 |
| GSMUA_Achr9P13270_001 | Banana | cytosol | 58.16 | 20.73 |
| AT2G32070.1 | Thale cress | nucleus | 58.16 | 20.73 |
| AT1G80780.3 | Thale cress | cytosol | 60.2 | 20.63 |
| GSMUA_Achr9P22440_001 | Banana | cytosol | 52.04 | 20.24 |
| Zm00001d052031_P001 | Maize | cytosol | 59.18 | 20.21 |
| EES05957 | Sorghum | nucleus | 59.18 | 20.14 |
| EER96736 | Sorghum | nucleus | 57.14 | 20.07 |
| CDY12234 | Canola | nucleus | 56.12 | 19.93 |
| GSMUA_Achr2P05120_001 | Banana | cytosol | 52.04 | 19.84 |
| Zm00001d020486_P001 | Maize | extracellular | 56.12 | 19.71 |
| Bra005614.1-P | Field mustard | nucleus | 55.1 | 19.57 |
| CDY64914 | Canola | nucleus | 55.1 | 19.57 |
| TraesCS6D01G341500.1 | Wheat | cytosol | 57.14 | 19.38 |
| HORVU6Hr1G085410.1 | Barley | cytosol | 57.14 | 19.38 |
| TraesCS6B01G391400.1 | Wheat | cytosol | 57.14 | 19.38 |
| TraesCS6A01G358700.1 | Wheat | cytosol | 57.14 | 19.38 |
| GSMUA_Achr4P04220_001 | Banana | nucleus | 52.04 | 18.96 |
| Os02t0796300-01 | Rice | cytosol | 56.12 | 18.64 |
| GSMUA_Achr4P04150_001 | Banana | cytosol | 51.02 | 18.59 |
| TraesCS7B01G198900.1 | Wheat | nucleus | 55.1 | 18.37 |
| GSMUA_Achr4P11450_001 | Banana | cytosol | 50.0 | 18.22 |
| TraesCS7D01G291400.1 | Wheat | nucleus | 54.08 | 18.03 |
| TraesCS7A01G297000.1 | Wheat | nucleus | 54.08 | 18.03 |
| AT1G15920.2 | Thale cress | nucleus | 52.04 | 17.83 |
| EES13910 | Sorghum | nucleus | 52.04 | 17.83 |
| HORVU7Hr1G067520.3 | Barley | nucleus | 54.08 | 17.67 |
| Zm00001d050433_P001 | Maize | nucleus | 48.98 | 17.14 |
| GSMUA_Achr3P04600_001 | Banana | nucleus | 41.84 | 16.73 |
| Os08t0440300-03 | Rice | cytosol | 48.98 | 16.67 |
| CDY35049 | Canola | nucleus | 45.92 | 16.3 |
| KRH30376 | Soybean | nucleus | 46.94 | 16.2 |
| KRH25294 | Soybean | nucleus | 44.9 | 15.83 |
| KRH67979 | Soybean | nucleus | 43.88 | 15.69 |
| KRG96235 | Soybean | nucleus | 43.88 | 15.69 |
| KRH26669 | Soybean | endoplasmic reticulum, golgi | 48.98 | 15.53 |
| KRH22647 | Soybean | endoplasmic reticulum, vacuole | 48.98 | 15.38 |
| GSMUA_Achr1P10040_001 | Banana | nucleus | 42.86 | 15.05 |
| Bra026093.1-P | Field mustard | nucleus | 45.92 | 15.05 |
| Zm00001d032158_P002 | Maize | plastid | 52.04 | 12.81 |
| CDY12236 | Canola | cytosol, extracellular | 50.0 | 11.89 |
| CDY33367 | Canola | cytosol, extracellular | 45.92 | 9.91 |
| KRH39619 | Soybean | cytosol, nucleus, plastid | 13.27 | 9.03 |
Protein Annotations
| EMBL:ACUP02006765 | EnsemblPlants:KRH28796 | EnsemblPlantsGene:GLYMA_11G077100 | Gene3D:3.30.420.10 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR036397 | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | InterPro:RNase_CAF1 | PANTHER:PTHR10797 |
| PANTHER:PTHR10797:SF31 | PFAM:PF04857 | ProteinID:KRH28796 | ProteinID:KRH28796.1 | SUPFAM:SSF53098 | UniParc:UPI0006EDA8D5 |
| UniProt:A0A0R0HDH6 | MapMan:35.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr11:+:5785246..5785542
Molecular Weight (calculated)
11479.6 Da
IEP (calculated)
4.071
GRAVY (calculated)
-0.369
Length
98 amino acids
Sequence
(BLAST)
(BLAST)
1: MLILSKGDSV QIREVWNDNL EEEFMLIHEI VDEYNYVAMD TKFHGVVLRP MENFKNINDY NYQTLKDNVD MLNLIQLGLT FSNKDGNLPT YDTESPCI
001: MSLFLKDDSI QIREVWNDNL QEEMDLIRDV VDDFPYVAMD TEFPGIVVRP VGTFKSNADY HYETLKTNVN ILKMIQLGLT FSNEQGNLPT CGTDKYCIWQ
101: FNFREFDLDS DIFALDSIEL LKQSGIDLAK NTLDGIDSKR FAELLMSSGI VLNENVHWVT FHSGYDFGYL LKLLTCQNLP DSQTDFFKLI NVYFPTVYDI
201: KHLMKFCNSL HGGLNKLAEL LEVERVGICH QAGSDSLLTS CTFRKLKENF FVGPLHKYSG VLYGLGVENG QVAI
101: FNFREFDLDS DIFALDSIEL LKQSGIDLAK NTLDGIDSKR FAELLMSSGI VLNENVHWVT FHSGYDFGYL LKLLTCQNLP DSQTDFFKLI NVYFPTVYDI
201: KHLMKFCNSL HGGLNKLAEL LEVERVGICH QAGSDSLLTS CTFRKLKENF FVGPLHKYSG VLYGLGVENG QVAI
Arabidopsis Description
Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HU15]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.