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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • nucleus 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr9P22440_001 Banana cytosol 63.03 64.29
GSMUA_Achr4P04220_001 Banana nucleus 66.93 63.94
GSMUA_Achr4P11450_001 Banana cytosol 66.54 63.57
GSMUA_Achr4P04150_001 Banana cytosol 66.15 63.2
GSMUA_Achr1P10040_001 Banana nucleus 60.7 55.91
Solyc11g045130.1.1 Tomato cytosol 59.14 55.47
PGSC0003DMT400058833 Potato cytosol 59.14 55.47
KRH61689 Soybean nucleus 58.75 55.31
KRH52356 Soybean nucleus 58.75 55.31
GSMUA_Achr9P13270_001 Banana cytosol 57.98 54.18
GSMUA_Achr3P04600_001 Banana nucleus 51.36 53.88
PGSC0003DMT400036620 Potato nucleus 57.2 53.65
VIT_04s0008g05850.t01 Wine grape nucleus 56.81 53.48
VIT_11s0037g00100.t01 Wine grape nucleus 56.03 53.33
Solyc03g117030.1.1 Tomato nucleus 56.81 53.28
Bra005614.1-P Field mustard nucleus 57.2 53.26
CDY64914 Canola nucleus 57.2 53.26
PGSC0003DMT400073328 Potato nucleus 56.03 52.75
CDY12234 Canola nucleus 56.42 52.54
KRH47360 Soybean nucleus 56.42 52.35
GSMUA_Achr9P29700_001 Banana cytosol 43.19 52.11
KRH28796 Soybean nucleus 19.84 52.04
VIT_09s0070g00060.t01 Wine grape nucleus 55.25 51.82
CDX70376 Canola nucleus 55.64 51.81
Bra006083.1-P Field mustard nucleus 55.64 51.44
CDX78405 Canola nucleus 55.64 51.44
AT2G32070.1 Thale cress nucleus 54.86 51.27
AT5G10960.1 Thale cress nucleus 55.25 51.26
GSMUA_Achr6P19450_001 Banana cytosol 48.64 51.23
Solyc06g068410.2.1 Tomato nucleus 49.81 50.79
CDX69796 Canola nucleus 54.86 50.72
CDX97069 Canola nucleus 55.25 50.71
KRH44539 Soybean cytosol 55.25 50.53
Bra009001.1-P Field mustard nucleus 54.86 50.36
CDX87343 Canola cytosol 53.31 49.82
Bra035152.1-P Field mustard cytosol 53.31 49.82
GSMUA_Achr6P19460_001 Banana cytosol 33.46 49.71
CDY63973 Canola nucleus 52.92 49.63
CDY39943 Canola cytosol 52.92 49.45
CDY53227 Canola nucleus 52.53 49.27
Bra008439.1-P Field mustard nucleus 52.53 49.27
AT1G15920.2 Thale cress nucleus 54.09 48.6
AT1G80780.3 Thale cress cytosol 53.7 48.25
CDY35049 Canola nucleus 49.42 46.01
Bra026093.1-P Field mustard nucleus 50.19 43.14
GSMUA_Achr8P18010_001 Banana mitochondrion 40.08 39.77
GSMUA_AchrUn_... Banana mitochondrion 39.69 39.69
CDY12236 Canola cytosol, extracellular 47.47 29.61
CDY33367 Canola cytosol, extracellular 49.81 28.19
GSMUA_Achr4P30930_001 Banana cytosol 17.9 23.59
GSMUA_Achr4P30910_001 Banana nucleus 27.63 21.01
Protein Annotations
EnsemblPlants:GSMUA_Achr2P05120_001EnsemblPlants:GSMUA_Achr2T05120_001EnsemblPlantsGene:GSMUA_Achr2G05120_001Gene3D:3.30.420.10GO:GO:0003674GO:GO:0003676
GO:GO:0005488InterPro:IPR036397InterPro:RNaseH-like_sfInterPro:RNaseH_sfInterPro:RNase_CAF1PANTHER:PTHR10797
PANTHER:PTHR10797:SF0PFAM:PF04857SUPFAM:SSF53098UniParc:UPI000295ED38UniProt:M0S5A3MapMan:35.1
Description
Probable CCR4-associated factor 1 homolog 7 [Source:GMGC_GENE;Acc:GSMUA_Achr2G05120_001]
Coordinates
chr2:+:10341727..10343136
Molecular Weight (calculated)
28745.5 Da
IEP (calculated)
5.769
GRAVY (calculated)
0.003
Length
257 amino acids
Sequence
(BLAST)
001: MCPLILAIMG VWGEEDAVEI RDVWAGNLES EFAVIRDIVD DFPYVAMDTE FPGVVIRHLG DFKQPADANY HSLSANVDLL HLLQLGLTFS DAAGNLPTSP
101: SSGRPVSGID FKKNREDGVD ARRFAELFMS SGVVLNDSIH WVAFHGAYDF GYLIKILTCR KLPETRKEFL DLLHVFFPVV YDIKRVIHLN NNLYGGLNKV
201: AEKLEVERVG TCHQAGSDSL LTARAFMKMR GHRFVGSMEK YVGLLFGLDI ESAHNQN
Best Arabidopsis Sequence Match ( AT1G80780.1 )
(BLAST)
001: MSLFLKDDSI QIREVWNDNL QEEMDLIRDV VDDFPYVAMD TEFPGIVVRP VGTFKSNADY HYETLKTNVN ILKMIQLGLT FSNEQGNLPT CGTDKYCIWQ
101: FNFREFDLDS DIFALDSIEL LKQSGIDLAK NTLDGIDSKR FAELLMSSGI VLNENVHWVT FHSGYDFGYL LKLLTCQNLP DSQTDFFKLI NVYFPTVYDI
201: KHLMKFCNSL HGGLNKLAEL LEVERVGICH QAGSDSLLTS CTFRKLKENF FVGPLHKYSG VLYGLGVENG QVAI
Arabidopsis Description
Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HU15]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.