Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 3
- nucleus 3
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d050433_P001 | Maize | nucleus | 85.31 | 87.14 |
Zm00001d032158_P002 | Maize | plastid | 94.76 | 68.09 |
Os08t0440300-03 | Rice | cytosol | 63.99 | 63.54 |
TraesCS7A01G297000.1 | Wheat | nucleus | 65.03 | 63.27 |
EER96736 | Sorghum | nucleus | 61.54 | 63.08 |
TraesCS7D01G291400.1 | Wheat | nucleus | 64.34 | 62.59 |
TraesCS7B01G198900.1 | Wheat | nucleus | 64.34 | 62.59 |
GSMUA_Achr3P04600_001 | Banana | nucleus | 53.15 | 62.04 |
HORVU7Hr1G067520.3 | Barley | nucleus | 65.03 | 62.0 |
GSMUA_Achr9P13270_001 | Banana | cytosol | 58.74 | 61.09 |
KRH52356 | Soybean | nucleus | 56.99 | 59.71 |
KRH61689 | Soybean | nucleus | 56.99 | 59.71 |
PGSC0003DMT400036620 | Potato | nucleus | 56.64 | 59.12 |
VIT_09s0070g00060.t01 | Wine grape | nucleus | 56.29 | 58.76 |
KRH47360 | Soybean | nucleus | 56.64 | 58.48 |
Bra008439.1-P | Field mustard | nucleus | 55.94 | 58.39 |
Solyc03g117030.1.1 | Tomato | nucleus | 55.94 | 58.39 |
CDY63973 | Canola | nucleus | 55.94 | 58.39 |
CDY53227 | Canola | nucleus | 55.94 | 58.39 |
Bra035152.1-P | Field mustard | cytosol | 55.94 | 58.18 |
CDX87343 | Canola | cytosol | 55.94 | 58.18 |
PGSC0003DMT400058833 | Potato | cytosol | 55.59 | 58.03 |
PGSC0003DMT400073328 | Potato | nucleus | 55.24 | 57.88 |
VIT_04s0008g05850.t01 | Wine grape | nucleus | 55.24 | 57.88 |
CDY39943 | Canola | cytosol | 55.59 | 57.82 |
EES05957 | Sorghum | nucleus | 57.69 | 57.29 |
CDY64914 | Canola | nucleus | 55.24 | 57.25 |
Bra005614.1-P | Field mustard | nucleus | 55.24 | 57.25 |
AT2G32070.1 | Thale cress | nucleus | 54.9 | 57.09 |
AT5G10960.1 | Thale cress | nucleus | 55.24 | 57.04 |
KRH44539 | Soybean | cytosol | 55.94 | 56.94 |
CDY12234 | Canola | nucleus | 54.9 | 56.88 |
Solyc06g068410.2.1 | Tomato | nucleus | 50.0 | 56.75 |
Solyc11g045130.1.1 | Tomato | cytosol | 54.2 | 56.57 |
CDX70376 | Canola | nucleus | 54.55 | 56.52 |
VIT_11s0037g00100.t01 | Wine grape | nucleus | 53.15 | 56.3 |
CDX69796 | Canola | nucleus | 54.55 | 56.12 |
AT1G80780.3 | Thale cress | cytosol | 55.94 | 55.94 |
CDX78405 | Canola | nucleus | 54.2 | 55.76 |
Bra006083.1-P | Field mustard | nucleus | 54.2 | 55.76 |
Bra009001.1-P | Field mustard | nucleus | 54.55 | 55.71 |
CDX97069 | Canola | nucleus | 53.85 | 55.0 |
CDY35049 | Canola | nucleus | 51.4 | 53.26 |
AT1G15920.2 | Thale cress | nucleus | 53.15 | 53.15 |
KRH28796 | Soybean | nucleus | 17.83 | 52.04 |
Bra026093.1-P | Field mustard | nucleus | 51.4 | 49.16 |
EES11684 | Sorghum | nucleus | 39.51 | 33.73 |
CDY12236 | Canola | cytosol, extracellular | 47.2 | 32.77 |
CDY33367 | Canola | cytosol, extracellular | 51.4 | 32.38 |
EER87806 | Sorghum | cytosol, nucleus, plasma membrane | 35.31 | 31.96 |
EES10179 | Sorghum | plasma membrane, plastid | 28.67 | 29.18 |
KXG20050 | Sorghum | plastid | 24.48 | 26.02 |
OQU83918 | Sorghum | cytosol, extracellular, nucleus | 16.08 | 24.47 |
OQU83919 | Sorghum | mitochondrion | 20.63 | 24.18 |
EES09326 | Sorghum | mitochondrion, nucleus | 24.48 | 23.49 |
OQU76452 | Sorghum | plastid | 13.29 | 23.31 |
KXG22837 | Sorghum | mitochondrion | 25.87 | 21.39 |
KXG38897 | Sorghum | plastid | 24.13 | 20.23 |
OQU76454 | Sorghum | plastid | 13.29 | 18.72 |
EER98038 | Sorghum | plastid | 32.52 | 16.15 |
OQU76453 | Sorghum | plastid | 15.73 | 14.95 |
Protein Annotations
Gene3D:3.30.420.10 | MapMan:35.1 | EntrezGene:8077842 | UniProt:C5YLK4 | EnsemblPlants:EES13910 | ProteinID:EES13910 |
ProteinID:EES13910.1 | GO:GO:0000932 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0004518 |
GO:GO:0004535 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
GO:GO:0006139 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009058 |
GO:GO:0009987 | GO:GO:0016787 | GO:GO:0017148 | GO:GO:0019538 | GO:GO:0030015 | GO:GO:0043928 |
GO:GO:0090503 | InterPro:IPR036397 | PFAM:PF04857 | PANTHER:PTHR10797 | PANTHER:PTHR10797:SF15 | InterPro:RNaseH-like_sf |
InterPro:RNaseH_sf | InterPro:RNase_CAF1 | EnsemblPlantsGene:SORBI_3007G140500 | SUPFAM:SSF53098 | unigene:Sbi.14701 | UniParc:UPI0001A87961 |
RefSeq:XP_002444415.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:+:56956346..56959499
Molecular Weight (calculated)
31397.7 Da
IEP (calculated)
4.643
GRAVY (calculated)
0.020
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASPPAAEG PDAVEIREVW AGNLEEEFAV IRAVVDAYPY VAMDTEFPGF VVKPSAEYRF TCDRNYAALE GNVNVLKLIQ LGLTLSNGAG ALPPCGTGGR
101: GCIWQFNFRG FDPHTDPSSN DSIDLLRRSG IDFDRFAAEG VDSTRFAELM MSSGIVLNDD VQWVTFHSGH DFGYLLRLLT GREMPNTLDE FLKLTKTFFP
201: VLYDIKHLMK FCGGGLYGGL SKLGELLKVE RVGIGHQAGS DSLLTLQCFM KLKQLYLNES VKLYDGVLFG LIPGEVEIKP AAPPIE
101: GCIWQFNFRG FDPHTDPSSN DSIDLLRRSG IDFDRFAAEG VDSTRFAELM MSSGIVLNDD VQWVTFHSGH DFGYLLRLLT GREMPNTLDE FLKLTKTFFP
201: VLYDIKHLMK FCGGGLYGGL SKLGELLKVE RVGIGHQAGS DSLLTLQCFM KLKQLYLNES VKLYDGVLFG LIPGEVEIKP AAPPIE
001: MSLFLKDDSI QIREVWNDNL QEEMDLIRDV VDDFPYVAMD TEFPGIVVRP VGTFKSNADY HYETLKTNVN ILKMIQLGLT FSNEQGNLPT CGTDKYCIWQ
101: FNFREFDLDS DIFALDSIEL LKQSGIDLAK NTLDGIDSKR FAELLMSSGI VLNENVHWVT FHSGYDFGYL LKLLTCQNLP DSQTDFFKLI NVYFPTVYDI
201: KHLMKFCNSL HGGLNKLAEL LEVERVGICH QAGSDSLLTS CTFRKLKENF FVGPLHKYSG VLYGLGVENG QVAI
101: FNFREFDLDS DIFALDSIEL LKQSGIDLAK NTLDGIDSKR FAELLMSSGI VLNENVHWVT FHSGYDFGYL LKLLTCQNLP DSQTDFFKLI NVYFPTVYDI
201: KHLMKFCNSL HGGLNKLAEL LEVERVGICH QAGSDSLLTS CTFRKLKENF FVGPLHKYSG VLYGLGVENG QVAI
Arabidopsis Description
Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HU15]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.