Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KXG27287 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G44260.1 | KXG27287 | AT1G22920.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029981_P001 | Maize | plastid | 78.3 | 71.97 |
| TraesCS6D01G318000.1 | Wheat | plastid | 41.94 | 50.53 |
| TraesCS3D01G384800.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 25.51 | 50.0 |
| TraesCS4D01G069900.1 | Wheat | plastid | 43.99 | 49.67 |
| TraesCS3A01G411800.1 | Wheat | mitochondrion, plastid | 43.4 | 49.33 |
| TraesCS4B01G071000.1 | Wheat | plastid | 42.52 | 49.15 |
| TraesCS3D01G406100.1 | Wheat | nucleus, plasma membrane, plastid | 40.76 | 49.12 |
| TraesCS4B01G071200.1 | Wheat | plastid | 43.11 | 48.84 |
| TraesCS4A01G243700.1 | Wheat | plastid | 42.23 | 48.32 |
| TraesCS4A01G243800.1 | Wheat | plastid | 42.23 | 48.32 |
| TraesCS4A01G243900.1 | Wheat | plastid | 42.52 | 48.17 |
| TraesCS3B01G444600.1 | Wheat | mitochondrion | 42.23 | 48.16 |
| TraesCS3B01G424000.1 | Wheat | cytosol | 29.03 | 48.06 |
| TraesCS4B01G071100.1 | Wheat | plastid | 42.52 | 48.01 |
| TraesCS3B01G445400.1 | Wheat | plastid | 43.11 | 44.41 |
| KXG20050 | Sorghum | plastid | 34.6 | 43.87 |
| OQU76452 | Sorghum | plastid | 17.89 | 37.42 |
| OQU76454 | Sorghum | plastid | 19.94 | 33.5 |
| CDX70991 | Canola | cytosol, nucleus, plastid | 12.02 | 32.28 |
| Bra020179.1-P | Field mustard | nucleus | 24.34 | 30.74 |
| CDY35673 | Canola | nucleus | 24.05 | 30.37 |
| CDY09125 | Canola | nucleus | 24.05 | 30.37 |
| EES10179 | Sorghum | plasma membrane, plastid | 24.63 | 29.89 |
| Bra035002.1-P | Field mustard | nucleus | 23.46 | 29.52 |
| CDY47299 | Canola | nucleus | 23.46 | 29.41 |
| VIT_06s0080g01090.t01 | Wine grape | nucleus | 23.46 | 28.78 |
| EER96736 | Sorghum | nucleus | 23.46 | 28.67 |
| PGSC0003DMT400042215 | Potato | plastid | 23.75 | 28.42 |
| Bra002400.1-P | Field mustard | nucleus | 23.17 | 28.11 |
| AT3G44260.1 | Thale cress | cytosol | 22.87 | 27.86 |
| EES05957 | Sorghum | nucleus | 23.46 | 27.78 |
| Solyc01g007840.2.1 | Tomato | plastid | 23.17 | 27.72 |
| CDY08688 | Canola | cytosol | 22.58 | 27.6 |
| CDX98586 | Canola | nucleus | 22.87 | 27.56 |
| CDX92371 | Canola | nucleus | 22.87 | 27.56 |
| KXG22837 | Sorghum | mitochondrion | 27.57 | 27.17 |
| CDX88806 | Canola | cytosol | 22.58 | 27.02 |
| AT5G22250.1 | Thale cress | cytosol | 21.99 | 26.98 |
| KRH25294 | Soybean | nucleus | 21.99 | 26.98 |
| Bra006616.1-P | Field mustard | cytosol | 22.29 | 26.67 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 19.94 | 26.46 |
| EER87806 | Sorghum | cytosol, nucleus, plasma membrane | 24.34 | 26.27 |
| KRH30376 | Soybean | nucleus | 21.7 | 26.06 |
| GSMUA_Achr8P18010_001 | Banana | mitochondrion | 19.65 | 25.87 |
| OQU83918 | Sorghum | cytosol, extracellular, nucleus | 14.08 | 25.53 |
| KRH26669 | Soybean | endoplasmic reticulum, golgi | 22.29 | 24.6 |
| KRH22647 | Soybean | endoplasmic reticulum, vacuole | 22.29 | 24.36 |
| OQU76453 | Sorghum | plastid | 21.41 | 24.25 |
| OQU83919 | Sorghum | mitochondrion | 17.3 | 24.18 |
| EES13910 | Sorghum | nucleus | 20.23 | 24.13 |
| EES11684 | Sorghum | nucleus | 23.46 | 23.88 |
| EES09326 | Sorghum | mitochondrion, nucleus | 19.06 | 21.81 |
| EER98038 | Sorghum | plastid | 26.98 | 15.97 |
Protein Annotations
| EnsemblPlants:KXG38897 | EnsemblPlantsGene:SORBI_3001G293900 | Gene3D:3.30.420.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR036397 | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | InterPro:RNase_CAF1 | PANTHER:PTHR10797 | PANTHER:PTHR10797:SF7 |
| PFAM:PF04857 | ProteinID:KXG38897 | ProteinID:KXG38897.1 | SEG:seg | SUPFAM:SSF53098 | UniParc:UPI00081AB8ED |
| UniProt:A0A1B6QLX3 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:57208236..57209270
Molecular Weight (calculated)
35966.0 Da
IEP (calculated)
7.744
GRAVY (calculated)
0.203
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MNMNSTVPAG CYSAMPTTPL QPAPTPTAPM TPLKSAPMPA VPTMPLQPAP MMPAMATMPL QQSAPMPAVS TMPLQPPAVP MMPAPFAVPV HEVWADNFHD
101: VEAAIGYFAA HARCVAVDVH YPGVVHGAAD HHHLHDLVAL TAEQRYATVK ANVDALKPLQ LGLAVVTDDG MVAAWEFNLS DFDPAVDPHA ASSVSGRGLR
201: CDDLRLRGIP VAKLTRALRL ISRPGVSWVT HTGAYHVAYL MKVVSGGNKL AGDVAGFMAA VRRSLGEDVY DVATMASDCR DMPVGLEGIA SRLGVAPPLS
301: MHPLAGAGSV LALGAFMKLR FHVFRGNVAR YRGVLQGLQA A
101: VEAAIGYFAA HARCVAVDVH YPGVVHGAAD HHHLHDLVAL TAEQRYATVK ANVDALKPLQ LGLAVVTDDG MVAAWEFNLS DFDPAVDPHA ASSVSGRGLR
201: CDDLRLRGIP VAKLTRALRL ISRPGVSWVT HTGAYHVAYL MKVVSGGNKL AGDVAGFMAA VRRSLGEDVY DVATMASDCR DMPVGLEGIA SRLGVAPPLS
301: MHPLAGAGSV LALGAFMKLR FHVFRGNVAR YRGVLQGLQA A
001: MAIIKPNRDL KPDGVTVVTR EVWAENLESE FELISEIIDD YPFISMDTEF PGVIFKSDLR FTNPDDLYTL LKANVDALSL IQVGLTLSDV NGNLPDLGDD
101: LHRGFIWEFN FRDFDVARDA HAPDSIELLR RQGIDFERNC RDGVESERFA ELMMSSGLVC NEEVSWVTFH SAYDFGYLMK ILTRRELPGA LGEFKRVMRV
201: LFGERVYDVK HMMKFCERRL FGGLDRVART LEVNRAVGKC HQAGSDSLLT WHAFQRMRDL YFVQDGPEKH AGVLYGLEVF
101: LHRGFIWEFN FRDFDVARDA HAPDSIELLR RQGIDFERNC RDGVESERFA ELMMSSGLVC NEEVSWVTFH SAYDFGYLMK ILTRRELPGA LGEFKRVMRV
201: LFGERVYDVK HMMKFCERRL FGGLDRVART LEVNRAVGKC HQAGSDSLLT WHAFQRMRDL YFVQDGPEKH AGVLYGLEVF
Arabidopsis Description
CAF1-9Probable CCR4-associated factor 1 homolog 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXM2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.