Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88806 | Canola | cytosol | 97.64 | 43.51 |
| Bra006616.1-P | Field mustard | cytosol | 96.06 | 42.81 |
| CDX98586 | Canola | nucleus | 95.28 | 42.76 |
| CDY09125 | Canola | nucleus | 90.55 | 42.59 |
| CDX92371 | Canola | nucleus | 94.49 | 42.4 |
| CDY35673 | Canola | nucleus | 89.76 | 42.22 |
| AT5G22250.1 | Thale cress | cytosol | 88.19 | 40.29 |
| CDY47299 | Canola | nucleus | 83.46 | 38.97 |
| CDY08688 | Canola | cytosol | 82.68 | 37.63 |
| GSMUA_Achr6P19460_001 | Banana | cytosol | 49.61 | 36.42 |
| VIT_06s0080g01090.t01 | Wine grape | nucleus | 79.53 | 36.33 |
| GSMUA_Achr6P19450_001 | Banana | cytosol | 67.72 | 35.25 |
| KRH30376 | Soybean | nucleus | 74.8 | 33.45 |
| GSMUA_Achr9P29700_001 | Banana | cytosol | 55.12 | 32.86 |
| KRH25294 | Soybean | nucleus | 70.08 | 32.01 |
| KRH26669 | Soybean | endoplasmic reticulum, golgi | 77.17 | 31.72 |
| KRH22647 | Soybean | endoplasmic reticulum, vacuole | 75.59 | 30.77 |
| Solyc01g007840.2.1 | Tomato | plastid | 61.42 | 27.37 |
| PGSC0003DMT400042215 | Potato | plastid | 60.63 | 27.02 |
| CDY53227 | Canola | nucleus | 56.69 | 26.28 |
| CDY63973 | Canola | nucleus | 56.69 | 26.28 |
| CDY64914 | Canola | nucleus | 56.69 | 26.09 |
| CDX70376 | Canola | nucleus | 55.91 | 25.72 |
| CDY12234 | Canola | nucleus | 55.91 | 25.72 |
| CDX78405 | Canola | nucleus | 55.91 | 25.54 |
| CDX87343 | Canola | cytosol | 55.12 | 25.45 |
| CDY39943 | Canola | cytosol | 55.12 | 25.45 |
| CDX97069 | Canola | nucleus | 55.12 | 25.0 |
| CDX69796 | Canola | nucleus | 54.33 | 24.82 |
| Zm00001d001774_P001 | Maize | nucleus | 56.69 | 24.24 |
| Os04t0684900-02 | Rice | nucleus | 62.2 | 24.01 |
| CDY35049 | Canola | nucleus | 51.97 | 23.91 |
| Zm00001d026657_P001 | Maize | cytosol | 55.91 | 23.75 |
| TraesCS2D01G597200.1 | Wheat | nucleus | 59.84 | 23.24 |
| TraesCS2A01G583000.1 | Wheat | nucleus | 59.06 | 23.15 |
| TraesCS2B01G603600.1 | Wheat | cytosol | 59.06 | 23.08 |
| HORVU2Hr1G123480.1 | Barley | nucleus | 58.27 | 22.77 |
| GSMUA_Achr8P18010_001 | Banana | mitochondrion | 44.88 | 22.01 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 44.09 | 21.79 |
| EES11684 | Sorghum | nucleus | 55.12 | 20.9 |
| TraesCSU01G062600.1 | Wheat | cytosol | 41.73 | 20.62 |
| TraesCS7D01G075800.1 | Wheat | nucleus | 40.94 | 20.16 |
| TraesCS3D01G384800.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 27.56 | 20.11 |
| TraesCS3B01G424000.1 | Wheat | cytosol | 29.13 | 17.96 |
| Os10t0124200-00 | Rice | cytosol | 37.8 | 16.27 |
| EER87806 | Sorghum | cytosol, nucleus, plasma membrane | 38.58 | 15.51 |
| TraesCS7A01G347500.1 | Wheat | cytosol | 32.28 | 15.47 |
| TraesCS7A01G347600.1 | Wheat | cytosol | 31.5 | 15.15 |
| TraesCS3A01G411800.1 | Wheat | mitochondrion, plastid | 35.43 | 15.0 |
| TraesCS3D01G406100.1 | Wheat | nucleus, plasma membrane, plastid | 33.07 | 14.84 |
| TraesCS7B01G235700.1 | Wheat | cytosol | 30.71 | 14.83 |
| TraesCS7D01G331400.1 | Wheat | cytosol | 30.71 | 14.83 |
| TraesCS3B01G444600.1 | Wheat | mitochondrion | 34.65 | 14.72 |
| CDY33367 | Canola | cytosol, extracellular | 51.97 | 14.54 |
| Os06t0138400-00 | Rice | nucleus, peroxisome, plastid | 42.52 | 14.4 |
| Os06t0503900-01 | Rice | cytosol, nucleus, plasma membrane | 31.5 | 14.23 |
| TraesCS6D01G318000.1 | Wheat | plastid | 31.5 | 14.13 |
| KXG20050 | Sorghum | plastid | 29.13 | 13.75 |
| OQU83919 | Sorghum | mitochondrion | 25.98 | 13.52 |
| EES09326 | Sorghum | mitochondrion, nucleus | 31.5 | 13.42 |
| OQU83918 | Sorghum | cytosol, extracellular, nucleus | 19.68 | 13.3 |
| Os10t0123900-00 | Rice | extracellular, mitochondrion, nucleus | 28.35 | 13.09 |
| TraesCS4B01G071000.1 | Wheat | plastid | 29.92 | 12.88 |
| CDY12236 | Canola | cytosol, extracellular | 41.73 | 12.86 |
| EES10179 | Sorghum | plasma membrane, plastid | 28.35 | 12.81 |
| TraesCS3B01G445400.1 | Wheat | plastid | 33.07 | 12.69 |
| TraesCS4A01G243900.1 | Wheat | plastid | 29.92 | 12.62 |
| TraesCS4B01G071200.1 | Wheat | plastid | 29.92 | 12.62 |
| TraesCS4D01G069900.1 | Wheat | plastid | 29.92 | 12.58 |
| CDY09974 | Canola | cytosol, mitochondrion, nucleus | 36.22 | 12.53 |
| CDY26919 | Canola | cytosol | 31.5 | 12.42 |
| TraesCS4A01G243800.1 | Wheat | plastid | 29.13 | 12.42 |
| CDX73277 | Canola | cytosol | 31.5 | 12.38 |
| CDY06214 | Canola | cytosol, mitochondrion, nucleus | 35.43 | 12.26 |
| TraesCS4B01G071100.1 | Wheat | plastid | 29.13 | 12.25 |
| Zm00001d048752_P001 | Maize | nucleus, plasma membrane, plastid | 28.35 | 12.24 |
| Zm00001d048754_P001 | Maize | nucleus, plasma membrane, plastid | 28.35 | 12.24 |
| CDY09972 | Canola | cytosol, mitochondrion, nucleus | 36.22 | 12.2 |
| Zm00001d007654_P001 | Maize | nucleus, plasma membrane, plastid | 27.56 | 12.15 |
| TraesCS4A01G243700.1 | Wheat | plastid | 28.35 | 12.08 |
| KXG38897 | Sorghum | plastid | 32.28 | 12.02 |
| Zm00001d048757_P001 | Maize | nucleus, plasma membrane, plastid | 27.56 | 11.99 |
| TraesCS7A01G082100.1 | Wheat | nucleus | 40.94 | 11.9 |
| Zm00001d029981_P001 | Maize | plastid | 34.65 | 11.86 |
| Zm00001d048746_P001 | Maize | nucleus, plasma membrane, plastid | 26.77 | 11.64 |
| Zm00001d048748_P001 | Maize | nucleus, plasma membrane, plastid | 26.77 | 11.6 |
| Os10t0128300-00 | Rice | plastid | 25.98 | 11.34 |
| Zm00001d002885_P001 | Maize | plastid | 26.77 | 10.66 |
| Os07t0169800-00 | Rice | nucleus | 40.16 | 10.2 |
| KXG22837 | Sorghum | mitochondrion | 27.56 | 10.12 |
| Zm00001d031508_P001 | Maize | cytosol | 28.35 | 9.14 |
| CDY22569 | Canola | cytosol | 32.28 | 9.07 |
| CDY12276 | Canola | cytosol | 22.05 | 7.91 |
| Zm00001d007893_P001 | Maize | nucleus | 30.71 | 7.82 |
| EER98038 | Sorghum | plastid | 34.65 | 7.64 |
| OQU76454 | Sorghum | plastid | 6.3 | 3.94 |
| OQU76453 | Sorghum | plastid | 6.3 | 2.66 |
| CDX83963 | Canola | cytosol | 0.0 | 0.0 |
| CDX96828 | Canola | cytosol | 0.0 | 0.0 |
| CDY70980 | Canola | cytosol | 0.0 | 0.0 |
| OQU76452 | Sorghum | plastid | 0.0 | 0.0 |
| Zm00001d007662_P001 | Maize | extracellular, nucleus, plastid | 0.0 | 0.0 |
| Zm00001d007664_P001 | Maize | extracellular, nucleus, plastid | 0.0 | 0.0 |
| Zm00001d007666_P001 | Maize | extracellular, nucleus, plastid | 0.0 | 0.0 |
| Zm00001d007669_P001 | Maize | extracellular, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX70991 | EnsemblPlantsGene:GSBRNA2T00140920001 | Gene3D:3.30.420.10 | GO:A0A078C1V5 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR036397 | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | InterPro:RNase_CAF1 | PANTHER:PTHR10797 |
| PANTHER:PTHR10797:SF3 | PFAM:PF04857 | ProteinID:CDX70991 | ProteinID:CDX70991.1 | SEG:seg | SUPFAM:SSF53098 |
| UniParc:UPI0004EF2D27 | MapMan:35.1 | : | : | : | : |
Description
BnaC03g10750D
Coordinates
chrLK031791:-:3081116..3081499
Molecular Weight (calculated)
14838.0 Da
IEP (calculated)
9.469
GRAVY (calculated)
-0.210
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSGLICNES VSWVTFHSAY DFGYLVKILT RRELPSSLRD FLRLLRAFFG ERVYDVKHMM KFCERRLYGG LDRLARSLEV NRKVGKCHQA GSDSLLTWHA
101: FQRMRDLYFA EHGPEKHAGV LYGLEVF
101: FQRMRDLYFA EHGPEKHAGV LYGLEVF
001: MAIIKPNRDL KPDGVTVVTR EVWAENLESE FELISEIIDD YPFISMDTEF PGVIFKSDLR FTNPDDLYTL LKANVDALSL IQVGLTLSDV NGNLPDLGDD
101: LHRGFIWEFN FRDFDVARDA HAPDSIELLR RQGIDFERNC RDGVESERFA ELMMSSGLVC NEEVSWVTFH SAYDFGYLMK ILTRRELPGA LGEFKRVMRV
201: LFGERVYDVK HMMKFCERRL FGGLDRVART LEVNRAVGKC HQAGSDSLLT WHAFQRMRDL YFVQDGPEKH AGVLYGLEVF
101: LHRGFIWEFN FRDFDVARDA HAPDSIELLR RQGIDFERNC RDGVESERFA ELMMSSGLVC NEEVSWVTFH SAYDFGYLMK ILTRRELPGA LGEFKRVMRV
201: LFGERVYDVK HMMKFCERRL FGGLDRVART LEVNRAVGKC HQAGSDSLLT WHAFQRMRDL YFVQDGPEKH AGVLYGLEVF
Arabidopsis Description
CAF1-9Probable CCR4-associated factor 1 homolog 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXM2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.