CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63309	Soybean	nucleus	91.32	91.32
KRH56898	Soybean	nucleus	71.15	72.57
KRH03497	Soybean	nucleus	70.87	72.29
VIT_17s0000g06400.t01	Wine grape	nucleus	66.39	65.83
KRH40061	Soybean	nucleus	45.38	44.63
KRH48487	Soybean	nucleus	38.1	41.98
KRH41635	Soybean	nucleus	36.69	41.85
KRH18465	Soybean	nucleus	41.74	41.62
KRH22042	Soybean	nucleus	40.9	41.48
KRH27280	Soybean	nucleus	39.78	41.4
KRH60340	Soybean	nucleus	36.69	40.81
KRH01200	Soybean	mitochondrion, nucleus	44.26	40.72
KRG93561	Soybean	nucleus	41.18	40.61
KRH39185	Soybean	nucleus	37.25	40.18
KRH13649	Soybean	nucleus	33.33	39.27
KRG94783	Soybean	nucleus	43.7	38.52
KRH06738	Soybean	nucleus	43.42	38.08
KRH26232	Soybean	nucleus	38.94	37.98
KRH43817	Soybean	nucleus	31.93	37.75
KRH08479	Soybean	nucleus	42.58	37.07
KRH55187	Soybean	nucleus	38.94	37.07
KRH60880	Soybean	nucleus	35.57	36.29
KRH70130	Soybean	nucleus	41.46	36.1
KRH61984	Soybean	nucleus	35.57	35.57
KRH52643	Soybean	cytoskeleton, cytosol, nucleus	34.45	34.65
KRH51562	Soybean	nucleus	35.85	34.22
KRH16201	Soybean	cytoskeleton, cytosol, nucleus	34.73	33.24
KRH32193	Soybean	cytosol, nucleus, plastid	27.45	33.11
KRH67403	Soybean	cytosol, nucleus, plastid	27.45	33.11
KRG95684	Soybean	cytosol, nucleus, peroxisome	27.17	32.99

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	UniProt:A0A0R0JV75	EMBL:ACUP02003542	EnsemblPlantsGene:GLYMA_06G195500	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	EnsemblPlants:KRH54575	ProteinID:KRH54575
ProteinID:KRH54575.1	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744
PANTHER:PTHR31744:SF7	SUPFAM:SSF101941	UniParc:UPI000189D1A5	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:+:17486133..17488223

Molecular Weight (calculated)

40201.5 Da

IEP (calculated)

8.971

GRAVY (calculated)

-0.571

Length

357 amino acids

Sequence
(BLAST)

001: MENVSVLLCN KEKDQMDLPP GFRFHPTDEE LISHYLYRKV TDTNFSARAI GEVDLNRSEP WDLPWKAKMG EKEWYFFCVR DRKYPTGLRT NRATESGYWK
101: ATGKDKEIFR GKSLVGMKKT LVFYKGRAPK GEKTDWVMHE YRLDGKFSVH NLPKTAKNEW VICRVFQKSS GVKRTHISGM MMLDSYGNEM VYSSSALPPL
201: TDSSPSIGNN TKALSVTDSA YVPCFSNPID VPRGIFDSLN NINISINSNT LYGVSSNHSF YNTQGVQLQA PPTLPLPSSS NHYLRAFLEN QGNGSNMSNN
301: GFEPEREMVS VSQKTSLSTD VKAEISSLGK RHFENQNNPI ASAAAVAPMD LATLWNY

Best Arabidopsis Sequence Match ( AT5G61430.1 )
(BLAST)

001: METFCGFQKE EEQMDLPPGF RFHPTDEELI THYLHKKVLD TSFSAKAIGE VDLNKSEPWE LPWMAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT
101: GKDKEIYRGK SLVGMKKTLV FYRGRAPKGQ KTNWVMHEYR LEGKFSAHNL PKTAKNEWVI CRVFQKSAGG KKIPISSLIR IGSLGTDFNP SLLPSLTDSS
201: PYNDKTKTEP VYVPCFSNQT DQNQGTTLNC FSSPVLNSIQ ADIFHRIPLY QTQSLQVSMN LQSPVLTQEH SVLHAMIENN RRQSLKTMSV SQETGVSTDM
301: NTDISSDFEF GKRRFDSQED PSSSTGPVDL EPFWNY

Arabidopsis Description

NAC100NAC domain-containing protein 100 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLJ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.