Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH01200 | Soybean | mitochondrion, nucleus | 89.26 | 83.51 |
| KRH18465 | Soybean | nucleus | 57.3 | 58.1 |
| KRG93561 | Soybean | nucleus | 56.47 | 56.63 |
| KRH03497 | Soybean | nucleus | 47.66 | 49.43 |
| KRH56898 | Soybean | nucleus | 47.66 | 49.43 |
| PGSC0003DMT400083083 | Potato | cytosol | 44.35 | 47.92 |
| Solyc06g069710.2.1 | Tomato | nucleus | 44.08 | 47.2 |
| GSMUA_Achr6P30570_001 | Banana | cytosol, nucleus, plastid | 41.87 | 46.77 |
| Solyc03g115850.2.1 | Tomato | nucleus | 41.6 | 46.32 |
| PGSC0003DMT400050262 | Potato | nucleus | 41.87 | 45.78 |
| KRH54575 | Soybean | nucleus | 44.63 | 45.38 |
| KRH63309 | Soybean | nucleus | 44.08 | 44.82 |
| GSMUA_Achr9P27530_001 | Banana | nucleus | 40.5 | 44.28 |
| VIT_14s0108g01070.t01 | Wine grape | nucleus | 49.59 | 42.76 |
| KRH27280 | Soybean | nucleus | 38.29 | 40.52 |
| KRH22042 | Soybean | nucleus | 39.12 | 40.34 |
| KRH48487 | Soybean | nucleus | 35.26 | 39.51 |
| KRH60340 | Soybean | nucleus | 34.44 | 38.94 |
| KRH41635 | Soybean | nucleus | 33.33 | 38.66 |
| KRH13649 | Soybean | nucleus | 31.96 | 38.28 |
| KRH39185 | Soybean | nucleus | 34.44 | 37.76 |
| KRH43817 | Soybean | nucleus | 31.13 | 37.42 |
| KRH26232 | Soybean | nucleus | 37.19 | 36.89 |
| KRH60880 | Soybean | nucleus | 34.99 | 36.29 |
| KRH52643 | Soybean | cytoskeleton, cytosol, nucleus | 35.26 | 36.06 |
| KRH55187 | Soybean | nucleus | 37.19 | 36.0 |
| KRH61984 | Soybean | nucleus | 34.71 | 35.29 |
| KRG94783 | Soybean | nucleus | 39.12 | 35.06 |
| KRH06738 | Soybean | nucleus | 38.84 | 34.64 |
| KRH51562 | Soybean | nucleus | 35.26 | 34.22 |
| KRH16201 | Soybean | cytoskeleton, cytosol, nucleus | 34.99 | 34.05 |
| KRH67403 | Soybean | cytosol, nucleus, plastid | 27.0 | 33.11 |
| KRG95684 | Soybean | cytosol, nucleus, peroxisome | 26.72 | 32.99 |
| KRH08479 | Soybean | nucleus | 36.91 | 32.68 |
| KRH70130 | Soybean | nucleus | 36.64 | 32.44 |
| KRH32193 | Soybean | cytosol, nucleus, plastid | 26.45 | 32.43 |
Protein Annotations
| EntrezGene:100782172 | MapMan:15.5.17 | Gene3D:3.30.310.150 | EMBL:ACUP02006017 | EnsemblPlantsGene:GLYMA_09G235700 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | UniProt:I1L5V3 | InterPro:IPR003441 | InterPro:IPR036093 | ProteinID:KRH40060.1 |
| EnsemblPlants:KRH40061 | ProteinID:KRH40061 | ProteinID:KRH40061.1 | ProteinID:KRH40062.1 | InterPro:NAC-dom | InterPro:NAC_dom_sf |
| PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF50 | SUPFAM:SSF101941 | UniParc:UPI0002338467 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:45832927..45837070
Molecular Weight (calculated)
41121.3 Da
IEP (calculated)
6.014
GRAVY (calculated)
-0.735
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSMENVSKP RKENQKFELP AGFRFHPRDE ELINHYLTKK VVDNCFCAVA IAEVDLNKCE PWDLPGLAKM GETEWYFFCV RDRKYPTGLR TNRATDAGYW
101: KATGKDREII MENALIGMKK TLVFYKGRAP KGEKTNWVMH EYRLEGKHNQ PNPGKSEWVI CRVFEKSPCG KKMHVLKCGR LNNSSGEEPS SCASLLPPLI
201: DSSPYNSETR TTTAGELSQL TCFSDPNQTE DQNNTHDDIV DSMETPILNF SPSSRPDDAS TLAKATLSSA SNQSAQIAHQ IGNSQFPDYY HVPQEQSMLR
301: MLMEKQGPIA NQIQKPEFSE GRDFDADISS MIYNNDMMHR MFGNQEHSSA SAGPVDTDFL WNY
101: KATGKDREII MENALIGMKK TLVFYKGRAP KGEKTNWVMH EYRLEGKHNQ PNPGKSEWVI CRVFEKSPCG KKMHVLKCGR LNNSSGEEPS SCASLLPPLI
201: DSSPYNSETR TTTAGELSQL TCFSDPNQTE DQNNTHDDIV DSMETPILNF SPSSRPDDAS TLAKATLSSA SNQSAQIAHQ IGNSQFPDYY HVPQEQSMLR
301: MLMEKQGPIA NQIQKPEFSE GRDFDADISS MIYNNDMMHR MFGNQEHSSA SAGPVDTDFL WNY
001: MDYKVSRSGE IVEGEVEDSE KIDLPPGFRF HPTDEELITH YLRPKVVNSF FSAIAIGEVD LNKVEPWDLP WKAKLGEKEW YFFCVRDRKY PTGLRTNRAT
101: KAGYWKATGK DKEIFKGKSL VGMKKTLVFY KGRAPKGVKT NWVMHEYRLE GKFAIDNLSK TAKNECVISR VFHTRTDGTK EHMSVGLPPL MDSSPYLKSR
201: GQDSLAGTTL GGLLSHVTYF SDQTTDDKSL VADFKTTMFG SGSTNFLPNI GSLLDFDPLF LQNNSSVLKM LLDNEETQFK KNLHNSGSSE SELTASSWQG
301: HNSYGSTGPV NLDCVWKF
101: KAGYWKATGK DKEIFKGKSL VGMKKTLVFY KGRAPKGVKT NWVMHEYRLE GKFAIDNLSK TAKNECVISR VFHTRTDGTK EHMSVGLPPL MDSSPYLKSR
201: GQDSLAGTTL GGLLSHVTYF SDQTTDDKSL VADFKTTMFG SGSTNFLPNI GSLLDFDPLF LQNNSSVLKM LLDNEETQFK KNLHNSGSSE SELTASSWQG
301: HNSYGSTGPV NLDCVWKF
Arabidopsis Description
NAC59NAC domain-containing protein 59 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJW3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.