Factsheet for PGSC0003DMT400050262

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g115850.2.1	Tomato	nucleus	95.48	97.24
PGSC0003DMT400083083	Potato	cytosol	70.48	69.64
PGSC0003DMT400003380	Potato	nucleus	51.81	53.25
VIT_14s0108g01070.t01	Wine grape	nucleus	63.25	49.88
GSMUA_Achr9P27530_001	Banana	nucleus	44.88	44.88
GSMUA_Achr6P30570_001	Banana	cytosol, nucleus, plastid	42.17	43.08
KRH40061	Soybean	nucleus	45.78	41.87
PGSC0003DMT400074048	Potato	nucleus	37.95	41.31
KRH18465	Soybean	nucleus	44.28	41.06
KRG93561	Soybean	nucleus	43.37	39.78
PGSC0003DMT400076103	Potato	nucleus	40.96	39.08
KRH01200	Soybean	mitochondrion, nucleus	45.18	38.66
PGSC0003DMT400013753	Potato	nucleus	37.95	37.61
PGSC0003DMT400032280	Potato	nucleus	31.02	35.89
PGSC0003DMT400026644	Potato	cytosol, nucleus, peroxisome	29.52	35.38
PGSC0003DMT400065559	Potato	nucleus	29.82	35.11
PGSC0003DMT400025690	Potato	nucleus	35.84	33.52
PGSC0003DMT400056916	Potato	nucleus	34.34	32.66
PGSC0003DMT400051915	Potato	cytosol	27.41	32.04
PGSC0003DMT400038464	Potato	nucleus	38.25	16.64

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441
InterPro:IPR036093	UniProt:M1BQ14	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	EnsemblPlantsGene:PGSC0003DMG400019523
PGSC:PGSC0003DMG400019523	EnsemblPlants:PGSC0003DMT400050262	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF7	SUPFAM:SSF101941
UniParc:UPI00029697AD	SEG:seg	:	:	:	:

Description

NAC domain-containing protein 21/22 [Source:PGSC_GENE;Acc:PGSC0003DMG400019523]

Coordinates

chr3:-:55715778..55717714

Molecular Weight (calculated)

38215.1 Da

IEP (calculated)

8.308

GRAVY (calculated)

-0.703

Length

332 amino acids

Sequence
(BLAST)

001: MENFSGTVKM DDQQQQQMEL PPGFRFHPTD EELITHYLSK KVVDMNFSAI AIGDVDMNKI EPWELPWKAK IGEKEWYFFC VRDKKYPTGL RTNRATAAGY
101: WKATGKDKEI FRGRSLVGMK KTLVFYKGRA PRGEKTNWVT HEYRLEGRLS LNNLPKTVKN DWVICRVFQK TTGGKKIHIS GLVRGNSDEN EIVNSVLPPL
201: TDSSPSHVHC FSNYVTTQKN QENNMINSFN NSPNFPLLSN SIDIFQRNSL PNSFTWNQNV PLQHNFPQPG SFPIQDPATL RNLLENYGQN IQHQSFKKET
301: DMITVSQETG ISTDMNTEIT SAQQDLDCFW TY

Best Arabidopsis Sequence Match ( AT5G61430.1 )
(BLAST)

001: METFCGFQKE EEQMDLPPGF RFHPTDEELI THYLHKKVLD TSFSAKAIGE VDLNKSEPWE LPWMAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT
101: GKDKEIYRGK SLVGMKKTLV FYRGRAPKGQ KTNWVMHEYR LEGKFSAHNL PKTAKNEWVI CRVFQKSAGG KKIPISSLIR IGSLGTDFNP SLLPSLTDSS
201: PYNDKTKTEP VYVPCFSNQT DQNQGTTLNC FSSPVLNSIQ ADIFHRIPLY QTQSLQVSMN LQSPVLTQEH SVLHAMIENN RRQSLKTMSV SQETGVSTDM
301: NTDISSDFEF GKRRFDSQED PSSSTGPVDL EPFWNY

Arabidopsis Description

NAC100NAC domain-containing protein 100 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLJ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.