Factsheet for Solyc03g115850.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400050262	Potato	nucleus	97.24	95.48
Solyc06g069710.2.1	Tomato	nucleus	70.86	68.14
Solyc02g088180.2.1	Tomato	cytosol	51.84	52.98
VIT_14s0108g01070.t01	Wine grape	nucleus	63.5	49.17
GSMUA_Achr9P27530_001	Banana	nucleus	46.01	45.18
GSMUA_Achr6P30570_001	Banana	cytosol, nucleus, plastid	42.94	43.08
KRH40061	Soybean	nucleus	46.32	41.6
Solyc07g062840.2.1	Tomato	nucleus	44.79	41.48
Solyc08g006020.2.1	Tomato	nucleus	37.73	40.73
KRH18465	Soybean	nucleus	44.48	40.5
Solyc08g074300.2.1	Tomato	nucleus	40.8	39.0
KRG93561	Soybean	nucleus	43.25	38.95
KRH01200	Soybean	mitochondrion, nucleus	46.01	38.66
Solyc12g036480.1.1	Tomato	nucleus	37.12	37.12
Solyc09g025310.2.1	Tomato	nucleus	29.45	35.56
Solyc06g008360.2.1	Tomato	nucleus	29.45	34.04
Solyc07g066330.2.1	Tomato	nucleus	34.97	33.33
Solyc06g069100.1.1	Tomato	nucleus	40.49	26.56

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441
InterPro:IPR036093	UniProt:K4BL87	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31744	PANTHER:PTHR31744:SF7	SUPFAM:SSF101941	EnsemblPlantsGene:Solyc03g115850.2	EnsemblPlants:Solyc03g115850.2.1	UniParc:UPI0002768B4B
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3:-:65450452..65452010

Molecular Weight (calculated)

37547.3 Da

IEP (calculated)

8.578

GRAVY (calculated)

-0.683

Length

326 amino acids

Sequence
(BLAST)

001: MENFSASVKM DDQQQMELPP GFRFHPTDEE LITHYLSKKV VDMNFSAIAI GDVDMNKIEP WELPWKAKIG EKEWYFFCVR DKKYPTGLRT NRATAAGYWK
101: ATGKDKEIFR GRSLVGMKKT LVFYRGRAPR GEKTNWVTHE YRLEGRLSLN NLPKTVKNDW VICRVFQKTT GGKKIHISGL VRANSDENEM VNTVLPPLTD
201: SSPSHVHCFS NYVTTQKNQE NNMINSFNNS PNFPLLSNSI DIFQRNSLPT SFTWNQNVPL QHNFPQPGSF PIQDPATLRN LLENYGHQSF KKETDMISVS
301: QETGISTDRN TEITSAQQDL DCFWTY

Best Arabidopsis Sequence Match ( AT5G61430.1 )
(BLAST)

001: METFCGFQKE EEQMDLPPGF RFHPTDEELI THYLHKKVLD TSFSAKAIGE VDLNKSEPWE LPWMAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT
101: GKDKEIYRGK SLVGMKKTLV FYRGRAPKGQ KTNWVMHEYR LEGKFSAHNL PKTAKNEWVI CRVFQKSAGG KKIPISSLIR IGSLGTDFNP SLLPSLTDSS
201: PYNDKTKTEP VYVPCFSNQT DQNQGTTLNC FSSPVLNSIQ ADIFHRIPLY QTQSLQVSMN LQSPVLTQEH SVLHAMIENN RRQSLKTMSV SQETGVSTDM
301: NTDISSDFEF GKRRFDSQED PSSSTGPVDL EPFWNY

Arabidopsis Description

NAC100NAC domain-containing protein 100 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLJ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.