Factsheet for Solyc08g074300.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400076103	Potato	nucleus	89.15	87.36
Solyc08g006020.2.1	Tomato	nucleus	53.37	60.26
Bra032095.1-P	Field mustard	nucleus	52.2	56.15
AT2G24430.1	Thale cress	nucleus	51.61	55.7
Bra007855.1-P	Field mustard	nucleus	51.61	55.52
CDX76817	Canola	nucleus	51.61	55.52
CDY20314	Canola	nucleus	51.61	55.52
CDY34773	Canola	nucleus	51.61	55.52
GSMUA_Achr6P01770_001	Banana	cytosol, mitochondrion, nucleus	37.24	54.98
VIT_04s0008g02710.t01	Wine grape	nucleus	47.21	49.54
KRH52643	Soybean	cytoskeleton, cytosol, nucleus	47.21	45.35
KRH61984	Soybean	nucleus	47.21	45.1
GSMUA_Achr8P24680_001	Banana	cytosol	39.3	42.27
GSMUA_Achr7P19680_001	Banana	cytosol, mitochondrion, nucleus	39.88	41.59
KRH16201	Soybean	cytoskeleton, cytosol, nucleus	45.16	41.29
Os09t0497900-01	Rice	cytosol	42.52	41.19
Solyc03g115850.2.1	Tomato	nucleus	39.0	40.8
Solyc02g088180.2.1	Tomato	cytosol	38.12	40.75
Solyc12g036480.1.1	Tomato	nucleus	37.83	39.57
Solyc06g069710.2.1	Tomato	nucleus	39.3	39.53
TraesCS5D01G283200.1	Wheat	mitochondrion, nucleus, plastid	41.94	39.29
TraesCS5A01G275900.1	Wheat	nucleus	42.23	39.24
TraesCS5B01G275200.1	Wheat	nucleus	41.94	38.86
HORVU5Hr1G074810.1	Barley	nucleus	41.06	38.57
EER99125	Sorghum	nucleus	42.52	38.56
Solyc07g062840.2.1	Tomato	nucleus	38.71	37.5
Zm00001d020982_P001	Maize	cytosol, mitochondrion, nucleus	41.35	37.5
Zm00001d006053_P001	Maize	nucleus	42.23	37.11
Solyc09g025310.2.1	Tomato	nucleus	25.81	32.59
Solyc06g008360.2.1	Tomato	nucleus	25.51	30.85
Solyc07g066330.2.1	Tomato	nucleus	29.91	29.82
Solyc06g069100.1.1	Tomato	nucleus	40.18	27.57

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441
InterPro:IPR036093	UniProt:K4CMF0	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31744	PANTHER:PTHR31744:SF50	SUPFAM:SSF101941	EnsemblPlantsGene:Solyc08g074300.2	EnsemblPlants:Solyc08g074300.2.1	UniParc:UPI000276AEE7
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr8:-:58411743..58414998

Molecular Weight (calculated)

38434.0 Da

IEP (calculated)

7.159

GRAVY (calculated)

-0.749

Length

341 amino acids

Sequence
(BLAST)

001: MEGEVKEEID LPPGFRFHPS DEELITYYLM NKISDSNNFI ARAIGDVDLN KSEPWDLPGK AKMGEEEWYF FSQRDRKYPT GVRTNRATNS GYWKTTGKDK
101: EIFSNLELVG MKKTLVFYKG RAPRGEKTNW VMHEYRLHSK SSYTTHKQDE WIVCRVFQKS NAGGKRYSTN NNTLRIHVNP YTTLDQINPN TICISSQIMM
201: PQVEHNTFQL AMGKSSSSSA HTMINHPEIQ EVFRGVSSSS SSNLMNLHTT LQSQMNYNLG GGNGFTISGL NLNLGGGGAT TSQPGPPPPR PRQDVSSSHV
301: MMTTHDDQAG YGEDMSSGNV MNRFMVLENS SHDLDNCWGN Y

Best Arabidopsis Sequence Match ( AT2G24430.1 )
(BLAST)

001: MEQGDHQQHK KEEEALPPGF RFHPTDEELI SYYLVNKIAD QNFTGKAIAD VDLNKSEPWE LPEKAKMGGK EWYFFSLRDR KYPTGVRTNR ATNTGYWKTT
101: GKDKEIFNST TSELVGMKKT LVFYRGRAPR GEKTCWVMHE YRLHSKSSYR TSKQDEWVVC RVFKKTEATK KYISTSSSST SHHHNNHTRA SILSTNNNNP
201: NYSSDLLQLP PHLQPHPSLN INQSLMANAV HLAELSRVFR ASTSTTMDSS HQQLMNYTHM PVSGLNLNLG GALVQPPPVV SLEDVAAVSA SYNGENGFGN
301: VEMSQCMDLD GYWPSY

Arabidopsis Description

ANAC038NAC domain containing protein 38 [Source:UniProtKB/TrEMBL;Acc:Q9ZQ25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.