Factsheet for Solyc07g066330.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400056916	Potato	nucleus	93.27	91.4
KRH13649	Soybean	nucleus	57.89	65.35
KRH43817	Soybean	nucleus	57.02	64.57
VIT_19s0027g00230.t01	Wine grape	nucleus	54.68	63.39
CDY51910	Canola	nucleus	42.69	58.4
CDX82566	Canola	nucleus	45.91	56.68
Bra001480.1-P	Field mustard	nucleus	45.61	56.32
Bra034713.1-P	Field mustard	nucleus	45.03	56.0
CDY60115	Canola	nucleus	45.32	55.56
CDY23558	Canola	nucleus	44.15	55.11
AT3G12977.1	Thale cress	nucleus	43.27	53.05
CDY10515	Canola	nucleus	49.42	52.48
GSMUA_Achr9P10210_001	Banana	nucleus	36.84	52.28
CDY42401	Canola	nucleus	48.25	51.4
Bra030820.1-P	Field mustard	nucleus	48.25	51.4
AT1G56010.2	Thale cress	nucleus	48.54	51.23
GSMUA_Achr6P31350_001	Banana	nucleus	44.44	51.01
TraesCS5D01G059700.2	Wheat	cytosol, nucleus, peroxisome	44.74	50.49
TraesCS5A01G049100.2	Wheat	cytosol, nucleus, peroxisome	44.74	50.0
TraesCS5B01G054200.2	Wheat	cytosol, nucleus, peroxisome	44.74	49.84
GSMUA_Achr5P26640_001	Banana	nucleus	43.57	49.83
Os06t0675600-01	Rice	nucleus	44.15	49.67
EER88807	Sorghum	nucleus	44.44	49.51
GSMUA_Achr8P33310_001	Banana	nucleus	40.94	49.47
GSMUA_Achr11P...	Banana	nucleus	40.35	49.46
Zm00001d014405_P001	Maize	nucleus	43.86	49.18
TraesCS7B01G365300.1	Wheat	nucleus	43.86	49.18
TraesCS7A01G464800.1	Wheat	nucleus	44.15	49.03
GSMUA_Achr3P23360_001	Banana	nucleus	40.06	48.93
GSMUA_Achr5P00500_001	Banana	nucleus	39.18	48.91
HORVU7Hr1G106480.1	Barley	nucleus	43.86	48.86
TraesCS7B01G364600.1	Wheat	nucleus	43.86	48.86
GSMUA_Achr6P30050_001	Banana	nucleus	40.64	48.77
TraesCS7D01G452500.1	Wheat	nucleus	43.86	48.7
TraesCS7A01G464100.1	Wheat	nucleus	43.57	48.53
TraesCS7D01G451700.1	Wheat	nucleus	43.57	47.76
GSMUA_Achr9P26140_001	Banana	cytosol	43.86	47.62
Os08t0200600-01	Rice	nucleus	40.35	47.1
TraesCS7D01G302000.1	Wheat	cytosol	40.06	47.08
TraesCS7A01G305200.1	Wheat	cytosol	39.77	47.06
TraesCS7B01G205600.1	Wheat	cytosol	39.47	46.23
Os12t0610600-01	Rice	nucleus	44.15	45.35
GSMUA_Achr8P07120_001	Banana	nucleus	39.18	44.52
EES13494	Sorghum	cytosol, nucleus, plastid	36.84	43.6
TraesCS2B01G484100.1	Wheat	cytosol, nucleus, plastid	35.96	42.71
Zm00001d024268_P001	Maize	cytosol, nucleus, plastid	35.09	42.55
OQU79579	Sorghum	cytosol, nucleus, peroxisome	40.94	41.92
TraesCS2D01G462900.1	Wheat	cytosol, nucleus, plastid	35.67	41.78
HORVU7Hr1G106660.9	Barley	nucleus, plastid	44.15	41.6
HORVU7Hr1G072670.3	Barley	cytosol, plastid	40.94	41.06
Zm00001d041472_P001	Maize	cytosol, nucleus, peroxisome	40.64	41.0
Solyc09g025310.2.1	Tomato	nucleus	31.29	39.63
HORVU2Hr1G103930.1	Barley	mitochondrion	33.92	39.32
OQU82346	Sorghum	cytosol, nucleus, plastid	35.09	38.84
Solyc06g008360.2.1	Tomato	nucleus	31.29	37.94
Zm00001d002285_P001	Maize	cytosol, nucleus, plastid	34.8	37.54
TraesCS2A01G462500.1	Wheat	plastid	35.67	36.42
Solyc08g006020.2.1	Tomato	nucleus	31.58	35.76
Solyc02g088180.2.1	Tomato	cytosol	32.75	35.11
Solyc03g115850.2.1	Tomato	nucleus	33.33	34.97
Solyc06g069710.2.1	Tomato	nucleus	34.5	34.81
KXG28193	Sorghum	cytosol	27.78	33.93
Solyc07g062840.2.1	Tomato	nucleus	34.5	33.52
Solyc12g036480.1.1	Tomato	nucleus	30.7	32.21
Solyc08g074300.2.1	Tomato	nucleus	29.82	29.91
Solyc06g069100.1.1	Tomato	nucleus	32.16	22.13

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441
InterPro:IPR036093	UniProt:K4CHV8	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31744	PANTHER:PTHR31744:SF5	SUPFAM:SSF101941	EnsemblPlantsGene:Solyc07g066330.2	EnsemblPlants:Solyc07g066330.2.1	UniParc:UPI000276B483
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7:-:67795893..67800800

Molecular Weight (calculated)

38828.7 Da

IEP (calculated)

7.831

GRAVY (calculated)

-0.625

Length

342 amino acids

Sequence
(BLAST)

001: MSNNNSLSMV ESKLPPGFRF HPRDEELICD YLMKKVDQQS EYQQQYPLLI EVDLNKSEPW EIPEVACVGG KEWYFYSQRD RKYATGLRTN RATVSGYWKA
101: TGKDRAIIRK GSLVGMRKTL VFYQGRAPKG RKSDWVMHEF RLELPIRPQI SSIKEDWVLC RVFHKKKELL ATKQEIGSNN IYYDNDTISC SSLPPLMDPY
201: ITFDQTNPNN NNMNMNELYY EQVPCFSIFT PNQTFTSHSH HLPSATTAIG STAYGGFPAD IGNYLNATAT SSTCDNNKVI RAVLSHLSTK NNIIMEGNNS
301: NNNNIINPAQ NIKGGNSPSF GEGSSETSFL SEVGYPTMWN NY

Best Arabidopsis Sequence Match ( AT1G56010.2 )
(BLAST)

001: METEEEMKES SISMVEAKLP PGFRFHPKDD ELVCDYLMRR SLHNNHRPPL VLIQVDLNKC EPWDIPKMAC VGGKDWYFYS QRDRKYATGL RTNRATATGY
101: WKATGKDRTI LRKGKLVGMR KTLVFYQGRA PRGRKTDWVM HEFRLQGSHH PPNHSLSSPK EDWVLCRVFH KNTEGVICRD NMGSCFDETA SASLPPLMDP
201: YINFDQEPSS YLSDDHHYII NEHVPCFSNL SQNQTLNSNL TNSVSELKIP CKNPNPLFTG GSASATLTGL DSFCSSDQMV LRALLSQLTK IDGSLGPKES
301: QSYGEGSSES LLTDIGIPST VWNC

Arabidopsis Description

NAC021NAC domain-containing protein 21/22 [Source:UniProtKB/Swiss-Prot;Acc:Q84TE6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.