Factsheet for TraesCS7A01G464800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

nucleus: 22082019

gfp PMID: 22082019 doi

Y Tang, M Liu, S Gao, Z Zhang, X Zhao, C Zhao, F Zhang, X Chen

Beijing Engineering and Technique Research Center of Hybrid Wheat, Beijing Academy of Agricultural and Forestry Science, Beijing 100097, People's Republic of China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G365300.1	Wheat	nucleus	96.75	97.7
TraesCS7D01G452500.1	Wheat	nucleus	97.08	97.08
TraesCS7A01G464100.1	Wheat	nucleus	93.51	93.81
Os06t0675600-01	Rice	nucleus	80.52	81.58
EER88807	Sorghum	nucleus	79.22	79.48
HORVU7Hr1G106660.9	Barley	nucleus, plastid	90.91	77.14
Zm00001d014405_P001	Maize	nucleus	75.97	76.72
GSMUA_Achr3P23360_001	Banana	nucleus	53.9	59.29
GSMUA_Achr8P33310_001	Banana	nucleus	52.92	57.6
GSMUA_Achr11P...	Banana	nucleus	50.97	56.27
GSMUA_Achr5P00500_001	Banana	nucleus	49.68	55.84
TraesCS7A01G305200.1	Wheat	cytosol	51.3	54.67
GSMUA_Achr5P26640_001	Banana	nucleus	52.92	54.52
GSMUA_Achr8P07120_001	Banana	nucleus	50.0	51.16
KRH13649	Soybean	nucleus	50.0	50.83
CDY51910	Canola	nucleus	40.91	50.4
Bra034713.1-P	Field mustard	nucleus	44.81	50.18
KRH43817	Soybean	nucleus	49.03	50.0
CDY60115	Canola	nucleus	45.13	49.82
AT3G12977.1	Thale cress	nucleus	44.81	49.46
Bra001480.1-P	Field mustard	nucleus	43.51	48.38
CDX82566	Canola	nucleus	43.51	48.38
CDY23558	Canola	nucleus	42.86	48.18
TraesCS5A01G049100.2	Wheat	cytosol, nucleus, peroxisome	47.73	48.04
VIT_19s0027g00230.t01	Wine grape	nucleus	44.81	46.78
CDY42401	Canola	nucleus	47.08	45.17
Bra030820.1-P	Field mustard	nucleus	47.08	45.17
AT1G56010.2	Thale cress	nucleus	47.08	44.75
CDY10515	Canola	nucleus	46.75	44.72
Solyc07g066330.2.1	Tomato	nucleus	49.03	44.15
PGSC0003DMT400056916	Potato	nucleus	49.03	43.27
TraesCS2A01G462500.1	Wheat	plastid	45.45	41.79
TraesCS3A01G077900.1	Wheat	nucleus	26.62	38.32
TraesCS6A01G378600.1	Wheat	nucleus	34.74	34.97
TraesCS2A01G101200.1	Wheat	nucleus	30.84	34.42
TraesCS4A01G242700.1	Wheat	cytosol, mitochondrion, nucleus	32.79	33.78
TraesCS2A01G382400.1	Wheat	nucleus	33.44	33.23
TraesCS6A01G378500.1	Wheat	nucleus	33.44	33.12
TraesCS2A01G338300.1	Wheat	nucleus	35.39	30.7
TraesCS2A01G101100.1	Wheat	cytosol, nucleus, plastid	33.44	29.6
TraesCS4A01G130600.1	Wheat	nucleus	32.79	29.53
TraesCS7A01G334800.1	Wheat	nucleus	33.77	28.65
TraesCS2A01G101400.1	Wheat	cytosol	32.79	28.61
TraesCS7A01G152500.1	Wheat	nucleus	32.47	28.09
TraesCS5A01G275900.1	Wheat	nucleus	33.12	27.79
TraesCS7A01G247600.1	Wheat	extracellular	30.19	27.6
TraesCS2A01G101000.1	Wheat	cytosol, nucleus, plastid	34.09	27.49
TraesCS7A01G194700.1	Wheat	nucleus	30.84	27.22
TraesCS7A01G569300.1	Wheat	cytosol	31.82	27.07
TraesCS7A01G189200.1	Wheat	nucleus	29.87	26.36
TraesCS5A01G245900.2	Wheat	nucleus	27.92	26.22
TraesCS7A01G569100.1	Wheat	nucleus	32.14	26.05
TraesCS5A01G143100.1	Wheat	nucleus	32.79	25.06

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31744	PANTHER:PTHR31744:SF45	SUPFAM:SSF101941	EnsemblPlantsGene:TraesCS7A01G464800	EnsemblPlants:TraesCS7A01G464800.1	SEG:seg

Description

No Description!

Coordinates

chr7A:-:661277572..661281265

Molecular Weight (calculated)

33932.4 Da

IEP (calculated)

8.285

GRAVY (calculated)

-0.423

Length

308 amino acids

Sequence
(BLAST)

001: MSSLSMVEAR LPPGFRFHPR DDELVLDYLS RKLGGGGAGG AAAAVASIYG CPAMVDVDLN KIEPWDLPEI ACIGGKEWYF YSLRDKKYAT GQRTNRATES
101: GYWKATGKDR AISRKGLLVG MRKTLVFYEG RAPKGKKTEW VMHEFRKEGQ GDLMKLPLKE DWVLCRVFYK TRTTIAKPST GSNYNIDSAA ATSLPPLIDN
201: YIAFDHPGMS TVQNLEGYEQ VPCFSNGPSS HPSSSASMNI PVMAMAPMAA DQEQQHMGKA IKDALSQLTR FEQGNVKREA PAQGGVFAQD GFEYLAESGF
301: SQMWNSLS

Best Arabidopsis Sequence Match ( AT1G56010.2 )
(BLAST)

001: METEEEMKES SISMVEAKLP PGFRFHPKDD ELVCDYLMRR SLHNNHRPPL VLIQVDLNKC EPWDIPKMAC VGGKDWYFYS QRDRKYATGL RTNRATATGY
101: WKATGKDRTI LRKGKLVGMR KTLVFYQGRA PRGRKTDWVM HEFRLQGSHH PPNHSLSSPK EDWVLCRVFH KNTEGVICRD NMGSCFDETA SASLPPLMDP
201: YINFDQEPSS YLSDDHHYII NEHVPCFSNL SQNQTLNSNL TNSVSELKIP CKNPNPLFTG GSASATLTGL DSFCSSDQMV LRALLSQLTK IDGSLGPKES
301: QSYGEGSSES LLTDIGIPST VWNC

Arabidopsis Description

NAC021NAC domain-containing protein 21/22 [Source:UniProtKB/Swiss-Prot;Acc:Q84TE6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.