Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5D01G283200.1 | Wheat | mitochondrion, nucleus, plastid | 97.0 | 97.8 |
TraesCS5B01G275200.1 | Wheat | nucleus | 96.73 | 96.47 |
HORVU5Hr1G074810.1 | Barley | nucleus | 89.37 | 90.36 |
Os09t0497900-01 | Rice | cytosol | 72.75 | 75.85 |
EER99125 | Sorghum | nucleus | 72.21 | 70.48 |
Zm00001d020982_P001 | Maize | cytosol, mitochondrion, nucleus | 69.48 | 67.82 |
Zm00001d006053_P001 | Maize | nucleus | 70.3 | 66.49 |
GSMUA_Achr6P01770_001 | Banana | cytosol, mitochondrion, nucleus | 38.69 | 61.47 |
VIT_04s0008g02710.t01 | Wine grape | nucleus | 50.14 | 56.62 |
KRH52643 | Soybean | cytoskeleton, cytosol, nucleus | 50.95 | 52.68 |
KRH61984 | Soybean | nucleus | 49.32 | 50.7 |
TraesCS3A01G077900.1 | Wheat | nucleus | 29.43 | 50.47 |
KRH16201 | Soybean | cytoskeleton, cytosol, nucleus | 50.68 | 49.87 |
AT2G24430.1 | Thale cress | nucleus | 40.87 | 47.47 |
Bra032095.1-P | Field mustard | nucleus | 40.6 | 47.0 |
CDY34773 | Canola | nucleus | 40.05 | 46.37 |
CDY20314 | Canola | nucleus | 40.05 | 46.37 |
Bra007855.1-P | Field mustard | nucleus | 39.78 | 46.06 |
CDX76817 | Canola | nucleus | 39.78 | 46.06 |
Solyc08g006020.2.1 | Tomato | nucleus | 37.87 | 46.03 |
GSMUA_Achr7P19680_001 | Banana | cytosol, mitochondrion, nucleus | 40.87 | 45.87 |
TraesCS4A01G242700.1 | Wheat | cytosol, mitochondrion, nucleus | 36.51 | 44.82 |
GSMUA_Achr8P24680_001 | Banana | cytosol | 37.6 | 43.53 |
PGSC0003DMT400076103 | Potato | nucleus | 40.87 | 43.1 |
Solyc08g074300.2.1 | Tomato | nucleus | 39.24 | 42.23 |
TraesCS2A01G101200.1 | Wheat | nucleus | 30.25 | 40.22 |
TraesCS7A01G152500.1 | Wheat | nucleus | 34.88 | 35.96 |
TraesCS4A01G130600.1 | Wheat | nucleus | 32.97 | 35.38 |
TraesCS5A01G245900.2 | Wheat | nucleus | 31.61 | 35.37 |
TraesCS2A01G338300.1 | Wheat | nucleus | 34.06 | 35.21 |
TraesCS7A01G334800.1 | Wheat | nucleus | 34.6 | 34.99 |
TraesCS7A01G569300.1 | Wheat | cytosol | 34.33 | 34.81 |
TraesCS7A01G247600.1 | Wheat | extracellular | 31.88 | 34.72 |
TraesCS7A01G194700.1 | Wheat | nucleus | 32.7 | 34.38 |
TraesCS7A01G305200.1 | Wheat | cytosol | 26.98 | 34.26 |
TraesCS7A01G464100.1 | Wheat | nucleus | 28.61 | 34.2 |
TraesCS2A01G101400.1 | Wheat | cytosol | 32.43 | 33.71 |
TraesCS2A01G101100.1 | Wheat | cytosol, nucleus, plastid | 31.88 | 33.62 |
TraesCS7A01G189200.1 | Wheat | nucleus | 31.88 | 33.52 |
TraesCS7A01G464800.1 | Wheat | nucleus | 27.79 | 33.12 |
TraesCS7A01G569100.1 | Wheat | nucleus | 33.79 | 32.63 |
TraesCS5A01G049100.2 | Wheat | cytosol, nucleus, peroxisome | 26.98 | 32.35 |
TraesCS6A01G378600.1 | Wheat | nucleus | 26.43 | 31.7 |
TraesCS2A01G101000.1 | Wheat | cytosol, nucleus, plastid | 32.15 | 30.89 |
TraesCS6A01G378500.1 | Wheat | nucleus | 26.16 | 30.87 |
TraesCS5A01G143100.1 | Wheat | nucleus | 33.24 | 30.27 |
TraesCS2A01G382400.1 | Wheat | nucleus | 25.07 | 29.68 |
TraesCS2A01G462500.1 | Wheat | plastid | 26.16 | 28.66 |
PGSC0003DMT400038464 | Potato | nucleus | 39.24 | 18.87 |
Protein Annotations
MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
PANTHER:PTHR31744 | PANTHER:PTHR31744:SF50 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS5A01G275900 | EnsemblPlants:TraesCS5A01G275900.1 | SEG:seg |
Description
No Description!
Coordinates
chr5A:-:485205059..485207261
Molecular Weight (calculated)
39872.1 Da
IEP (calculated)
9.274
GRAVY (calculated)
-0.711
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGSGAGGGG GGGEGAVSKK KSSKEGEEES LPPGFRFHPT DEELITYYLR GKIADAGFTA RAITEVDLNK CEPWDLPEKA KMGEKEWYFF SLRDRKYPTG
101: VRTNRATNAG YWKTTGKDKE IFTGQPPSAQ ELVGMKKTLV FYKGRAPRGE KSNWVMHEYR LHLKPASKSN KDEWVVCRIF AKSPGVKKYP SSTNAHSRSH
201: HHPYTLDMVP QFLPTLLGHD LFGGGRGHHH PYMTPADLAE LSRFARGTPG LHPHIQPHPA AAGYLNPPGP FTLSNLNLNL GGPSPQHALH HAMSMPMGQQ
301: QQQQQAGGAN GQAMTMEQHM AAGLGGVPAA GGDGGFGGEG HAAGGAGMRY QNLDVDQMVE RYWPGSY
101: VRTNRATNAG YWKTTGKDKE IFTGQPPSAQ ELVGMKKTLV FYKGRAPRGE KSNWVMHEYR LHLKPASKSN KDEWVVCRIF AKSPGVKKYP SSTNAHSRSH
201: HHPYTLDMVP QFLPTLLGHD LFGGGRGHHH PYMTPADLAE LSRFARGTPG LHPHIQPHPA AAGYLNPPGP FTLSNLNLNL GGPSPQHALH HAMSMPMGQQ
301: QQQQQAGGAN GQAMTMEQHM AAGLGGVPAA GGDGGFGGEG HAAGGAGMRY QNLDVDQMVE RYWPGSY
001: MEQGDHQQHK KEEEALPPGF RFHPTDEELI SYYLVNKIAD QNFTGKAIAD VDLNKSEPWE LPEKAKMGGK EWYFFSLRDR KYPTGVRTNR ATNTGYWKTT
101: GKDKEIFNST TSELVGMKKT LVFYRGRAPR GEKTCWVMHE YRLHSKSSYR TSKQDEWVVC RVFKKTEATK KYISTSSSST SHHHNNHTRA SILSTNNNNP
201: NYSSDLLQLP PHLQPHPSLN INQSLMANAV HLAELSRVFR ASTSTTMDSS HQQLMNYTHM PVSGLNLNLG GALVQPPPVV SLEDVAAVSA SYNGENGFGN
301: VEMSQCMDLD GYWPSY
101: GKDKEIFNST TSELVGMKKT LVFYRGRAPR GEKTCWVMHE YRLHSKSSYR TSKQDEWVVC RVFKKTEATK KYISTSSSST SHHHNNHTRA SILSTNNNNP
201: NYSSDLLQLP PHLQPHPSLN INQSLMANAV HLAELSRVFR ASTSTTMDSS HQQLMNYTHM PVSGLNLNLG GALVQPPPVV SLEDVAAVSA SYNGENGFGN
301: VEMSQCMDLD GYWPSY
Arabidopsis Description
ANAC038NAC domain containing protein 38 [Source:UniProtKB/TrEMBL;Acc:Q9ZQ25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.