Factsheet for GSMUA_Achr8P24680_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P19680_001	Banana	cytosol, mitochondrion, nucleus	71.92	69.72
GSMUA_Achr6P01770_001	Banana	cytosol, mitochondrion, nucleus	48.9	67.1
GSMUA_Achr9P00570_001	Banana	nucleus	26.81	50.6
GSMUA_Achr10P...	Banana	cytosol	34.38	47.81
GSMUA_Achr5P07600_001	Banana	cytosol	34.7	44.72
VIT_04s0008g02710.t01	Wine grape	nucleus	45.11	44.0
GSMUA_Achr8P18420_001	Banana	nucleus	39.43	43.4
Solyc08g006020.2.1	Tomato	nucleus	39.75	41.72
Bra032095.1-P	Field mustard	nucleus	41.01	41.01
AT2G24430.1	Thale cress	nucleus	40.69	40.82
CDY20314	Canola	nucleus	40.69	40.69
CDX76817	Canola	nucleus	40.38	40.38
GSMUA_Achr10P...	Banana	nucleus	41.64	40.24
CDY34773	Canola	nucleus	40.06	40.06
Bra007855.1-P	Field mustard	nucleus	40.06	40.06
Os09t0497900-01	Rice	cytosol	44.48	40.06
KRH61984	Soybean	nucleus	45.11	40.06
KRH52643	Soybean	cytoskeleton, cytosol, nucleus	44.16	39.44
Solyc08g074300.2.1	Tomato	nucleus	42.27	39.3
EER99125	Sorghum	nucleus	46.06	38.83
Zm00001d020982_P001	Maize	cytosol, mitochondrion, nucleus	45.74	38.56
GSMUA_Achr9P16920_001	Banana	cytosol	36.91	38.24
PGSC0003DMT400076103	Potato	nucleus	41.96	38.22
TraesCS5D01G283200.1	Wheat	mitochondrion, nucleus, plastid	43.85	38.19
HORVU5Hr1G074810.1	Barley	nucleus	43.22	37.74
GSMUA_Achr7P18330_001	Banana	nucleus	36.59	37.66
GSMUA_Achr10P...	Banana	nucleus	39.43	37.65
TraesCS5A01G275900.1	Wheat	nucleus	43.53	37.6
GSMUA_Achr3P18020_001	Banana	nucleus	34.7	37.54
TraesCS5B01G275200.1	Wheat	nucleus	43.53	37.5
Zm00001d006053_P001	Maize	nucleus	45.74	37.37
GSMUA_Achr9P10210_001	Banana	nucleus	27.76	36.51
KRH16201	Soybean	cytoskeleton, cytosol, nucleus	42.9	36.46
GSMUA_Achr10P...	Banana	cytosol	40.06	35.77
GSMUA_Achr3P09520_001	Banana	cytosol	35.33	35.22
GSMUA_Achr11P...	Banana	nucleus	30.91	35.13
GSMUA_Achr6P08600_001	Banana	nucleus	38.17	34.87
GSMUA_Achr3P23360_001	Banana	nucleus	30.28	34.29
GSMUA_Achr6P30570_001	Banana	cytosol, nucleus, plastid	35.02	34.15
GSMUA_Achr9P27530_001	Banana	nucleus	35.65	34.04
GSMUA_Achr9P20090_001	Banana	cytosol	33.75	33.75
GSMUA_Achr8P33310_001	Banana	nucleus	29.97	33.57
GSMUA_Achr5P00500_001	Banana	nucleus	28.71	33.21
GSMUA_Achr11P...	Banana	nucleus	27.13	32.82
GSMUA_Achr5P26640_001	Banana	nucleus	30.91	32.78
GSMUA_Achr6P30050_001	Banana	nucleus	29.34	32.63
GSMUA_Achr8P07120_001	Banana	nucleus	30.91	32.56
GSMUA_Achr5P18670_001	Banana	nucleus	27.44	31.87
GSMUA_Achr6P32290_001	Banana	nucleus	34.38	31.5
GSMUA_Achr7P11500_001	Banana	nucleus	33.44	31.18
GSMUA_Achr6P31350_001	Banana	nucleus	29.02	30.87
GSMUA_Achr9P26140_001	Banana	cytosol	30.6	30.79
GSMUA_Achr8P18980_001	Banana	nucleus	26.5	30.77
GSMUA_AchrUn_...	Banana	nucleus	27.44	30.0
GSMUA_Achr11P...	Banana	nucleus	25.87	29.5
GSMUA_AchrUn_...	Banana	nucleus	23.66	29.18
GSMUA_Achr1P20530_001	Banana	cytosol, nucleus, plastid	25.24	28.88
GSMUA_Achr1P10860_001	Banana	nucleus	26.5	28.87
GSMUA_Achr6P36550_001	Banana	nucleus	25.24	28.78
GSMUA_Achr8P21470_001	Banana	nucleus	37.54	23.06
PGSC0003DMT400038464	Potato	nucleus	41.32	17.17

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr8G24680_001
EnsemblPlants:GSMUA_Achr8P24680_001	EnsemblPlants:GSMUA_Achr8T24680_001	InterPro:IPR003441	InterPro:IPR036093	UniProt:M0TTC1	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31744	PANTHER:PTHR31744:SF50	SUPFAM:SSF101941
UniParc:UPI000296D448	SEG:seg	:	:	:	:

Description

no apical meristem protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G24680_001]

Coordinates

chr8:-:28796304..28797534

Molecular Weight (calculated)

35291.9 Da

IEP (calculated)

8.322

GRAVY (calculated)

-0.448

Length

317 amino acids

Sequence
(BLAST)

001: MEEGKEEDRL PPGFRFHPTD EELIAHYLTN KMTEPNFGAR AIAEVDINKC EPWDLPGRAK MGEKEWYFFT LRDLKYPTGV RTNRATEAGY WKTTGKDKEI
101: FGSSSSSTSE LVGLKKTLVF YKGRAPRGEK TNWVMHEYRI HSKSPFRGNN KDEWVVCRVF MKSSGGKRYP SHQPRATTNT MMHSLIQNDL FHLGAARSYL
201: SNAELMELSR FARGGHGANL PIQPQLNFHG GGFPLAGLNL NLVAPTPAPQ GVAELPSSVL ANGVMGGADG GFGTDVSSMI TGLHNVDSCL VFFHHTSPFV
301: FLYSNYTYSN QIDVSCL

Best Arabidopsis Sequence Match ( AT2G24430.1 )
(BLAST)

001: MEQGDHQQHK KEEEALPPGF RFHPTDEELI SYYLVNKIAD QNFTGKAIAD VDLNKSEPWE LPEKAKMGGK EWYFFSLRDR KYPTGVRTNR ATNTGYWKTT
101: GKDKEIFNST TSELVGMKKT LVFYRGRAPR GEKTCWVMHE YRLHSKSSYR TSKQDEWVVC RVFKKTEATK KYISTSSSST SHHHNNHTRA SILSTNNNNP
201: NYSSDLLQLP PHLQPHPSLN INQSLMANAV HLAELSRVFR ASTSTTMDSS HQQLMNYTHM PVSGLNLNLG GALVQPPPVV SLEDVAAVSA SYNGENGFGN
301: VEMSQCMDLD GYWPSY

Arabidopsis Description

ANAC038NAC domain containing protein 38 [Source:UniProtKB/TrEMBL;Acc:Q9ZQ25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.