Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29982 | Canola | cytosol | 48.25 | 63.95 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 58.33 | 54.06 |
| EES02626 | Sorghum | cytosol | 33.77 | 53.85 |
| GSMUA_Achr9P00570_001 | Banana | nucleus | 38.6 | 52.38 |
| TraesCS3B01G092800.1 | Wheat | cytosol | 48.68 | 52.11 |
| TraesCS3A01G077900.1 | Wheat | nucleus | 46.93 | 50.0 |
| HORVU3Hr1G014090.1 | Barley | nucleus | 47.37 | 49.77 |
| HORVU2Hr1G017360.1 | Barley | nucleus | 32.46 | 48.68 |
| TraesCS3D01G078500.1 | Wheat | nucleus | 46.93 | 47.56 |
| HORVU2Hr1G017380.1 | Barley | cytosol, nucleus, plastid | 47.81 | 46.38 |
| GSMUA_Achr6P01770_001 | Banana | cytosol, mitochondrion, nucleus | 45.18 | 44.59 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 56.58 | 44.03 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 57.89 | 43.14 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 63.6 | 41.91 |
| TraesCS2A01G101200.1 | Wheat | nucleus | 50.0 | 41.3 |
| TraesCS2D01G100800.1 | Wheat | nucleus | 49.56 | 40.94 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 55.26 | 40.91 |
| AT5G18270.1 | Thale cress | nucleus | 58.77 | 40.0 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 55.26 | 39.62 |
| Bra006449.1-P | Field mustard | nucleus | 58.33 | 39.58 |
| Bra023669.1-P | Field mustard | nucleus | 57.89 | 39.29 |
| CDY53250 | Canola | nucleus | 57.89 | 39.29 |
| CDX70804 | Canola | nucleus | 57.89 | 39.17 |
| CDY02636 | Canola | nucleus | 57.89 | 39.17 |
| CDY51238 | Canola | nucleus | 57.89 | 39.17 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 59.21 | 38.9 |
| Bra002148.1-P | Field mustard | nucleus | 57.02 | 38.69 |
| GSMUA_Achr8P18420_001 | Banana | nucleus | 48.68 | 38.54 |
| Os01t0104500-01 | Rice | cytosol, mitochondrion, nucleus | 53.51 | 38.12 |
| Os07t0684800-01 | Rice | cytosol | 50.0 | 37.87 |
| AT3G04060.1 | Thale cress | nucleus | 56.14 | 37.87 |
| GSMUA_Achr9P10210_001 | Banana | nucleus | 39.47 | 37.34 |
| Os01t0393100-01 | Rice | nucleus | 53.51 | 37.2 |
| TraesCS7B01G094000.1 | Wheat | nucleus | 44.3 | 37.0 |
| Zm00001d028995_P001 | Maize | cytosol | 56.58 | 36.75 |
| Bra040153.1-P | Field mustard | nucleus | 55.26 | 36.73 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 55.26 | 36.73 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 55.26 | 36.63 |
| Zm00001d047554_P001 | Maize | cytoskeleton, cytosol, nucleus | 55.7 | 36.49 |
| CDY42901 | Canola | nucleus | 54.82 | 36.34 |
| TraesCS4D01G176000.1 | Wheat | nucleus | 54.39 | 36.26 |
| TraesCS4B01G174000.1 | Wheat | cytosol | 53.95 | 36.07 |
| TraesCS4A01G130600.1 | Wheat | nucleus | 53.95 | 35.96 |
| GSMUA_Achr9P27530_001 | Banana | nucleus | 52.19 | 35.84 |
| GSMUA_Achr6P30570_001 | Banana | cytosol, nucleus, plastid | 50.88 | 35.69 |
| HORVU4Hr1G051360.3 | Barley | nucleus | 53.95 | 35.55 |
| GSMUA_Achr11P... | Banana | nucleus | 42.98 | 35.13 |
| EER92328 | Sorghum | cytosol | 54.82 | 35.11 |
| GSMUA_Achr10P... | Banana | nucleus | 50.0 | 34.76 |
| GSMUA_Achr11P... | Banana | nucleus | 39.91 | 34.73 |
| GSMUA_Achr5P00500_001 | Banana | nucleus | 41.67 | 34.67 |
| TraesCS2B01G118500.1 | Wheat | cytosol | 53.51 | 34.66 |
| Zm00001d022517_P001 | Maize | nucleus | 48.25 | 34.59 |
| GSMUA_Achr7P19680_001 | Banana | cytosol, mitochondrion, nucleus | 49.56 | 34.56 |
| GSMUA_Achr8P24680_001 | Banana | cytosol | 47.81 | 34.38 |
| Os03t0327100-01 | Rice | nucleus | 53.95 | 34.36 |
| TraesCS2D01G100900.1 | Wheat | nucleus | 53.07 | 34.28 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 60.53 | 34.24 |
| EER97754 | Sorghum | nucleus | 50.0 | 34.23 |
| TraesCS2A01G101400.1 | Wheat | cytosol | 52.63 | 33.99 |
| TraesCS2A01G101100.1 | Wheat | cytosol, nucleus, plastid | 51.32 | 33.62 |
| TraesCS2B01G118200.1 | Wheat | cytosol, nucleus, plastid | 51.75 | 33.62 |
| GSMUA_Achr8P33310_001 | Banana | nucleus | 41.67 | 33.57 |
| Zm00001d005028_P001 | Maize | cytosol | 47.37 | 33.54 |
| GSMUA_Achr5P18670_001 | Banana | nucleus | 39.91 | 33.33 |
| GSMUA_Achr3P23360_001 | Banana | nucleus | 40.79 | 33.21 |
| TraesCS7B01G489500.2 | Wheat | cytosol | 50.44 | 33.14 |
| GSMUA_Achr9P20090_001 | Banana | cytosol | 46.05 | 33.12 |
| KRG94783 | Soybean | nucleus | 58.77 | 33.09 |
| TraesCS2B01G118400.1 | Wheat | cytosol, nucleus, plastid | 50.88 | 33.05 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.84 | 32.68 |
| GSMUA_Achr6P30050_001 | Banana | nucleus | 40.79 | 32.63 |
| GSMUA_Achr10P... | Banana | nucleus | 47.37 | 32.53 |
| TraesCS7D01G543400.1 | Wheat | nucleus | 48.25 | 32.35 |
| TraesCS5A01G245900.2 | Wheat | nucleus | 46.49 | 32.32 |
| TraesCS7A01G152500.1 | Wheat | nucleus | 50.44 | 32.3 |
| GSMUA_Achr8P18980_001 | Banana | nucleus | 38.6 | 32.23 |
| GSMUA_Achr6P31350_001 | Banana | nucleus | 42.11 | 32.21 |
| TraesCS7B01G100300.1 | Wheat | nucleus | 45.61 | 32.2 |
| GSMUA_Achr5P26640_001 | Banana | nucleus | 42.11 | 32.11 |
| TraesCS2D01G100600.1 | Wheat | cytosol, nucleus, plastid | 51.75 | 32.07 |
| TraesCS7D01G154200.1 | Wheat | nucleus | 50.0 | 32.02 |
| KRH08479 | Soybean | nucleus | 57.46 | 31.95 |
| KRH06738 | Soybean | nucleus | 57.02 | 31.94 |
| TraesCS7B01G056300.1 | Wheat | nucleus | 50.0 | 31.93 |
| HORVU7Hr1G031260.1 | Barley | nucleus | 49.56 | 31.92 |
| KRH70130 | Soybean | nucleus | 57.02 | 31.71 |
| TraesCS2A01G101000.1 | Wheat | cytosol, nucleus, plastid | 52.63 | 31.41 |
| TraesCS5B01G243300.1 | Wheat | nucleus | 36.84 | 31.34 |
| HORVU2Hr1G017400.3 | Barley | nucleus | 52.63 | 31.33 |
| TraesCS7D01G189900.1 | Wheat | nucleus | 44.3 | 31.27 |
| TraesCS3B01G092900.3 | Wheat | nucleus | 48.68 | 31.09 |
| TraesCS7A01G569300.1 | Wheat | cytosol | 49.12 | 30.94 |
| GSMUA_Achr7P11500_001 | Banana | nucleus | 46.05 | 30.88 |
| HORVU7Hr1G122680.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 50.0 | 30.81 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.04 | 30.69 |
| GSMUA_Achr11P... | Banana | nucleus | 37.28 | 30.58 |
| GSMUA_Achr6P36550_001 | Banana | nucleus | 37.28 | 30.58 |
| GSMUA_Achr9P26140_001 | Banana | cytosol | 42.11 | 30.48 |
| HORVU7Hr1G039700.1 | Barley | nucleus | 46.05 | 30.35 |
| GSMUA_Achr1P10860_001 | Banana | nucleus | 38.6 | 30.24 |
| GSMUA_Achr8P07120_001 | Banana | nucleus | 39.91 | 30.23 |
| GSMUA_Achr10P... | Banana | cytosol | 46.93 | 30.14 |
| TraesCS7D01G196300.1 | Wheat | cytosol, nucleus, peroxisome | 46.05 | 30.09 |
| TraesCS7D01G543500.2 | Wheat | endoplasmic reticulum | 50.0 | 30.0 |
| GSMUA_Achr1P20530_001 | Banana | cytosol, nucleus, plastid | 36.4 | 29.96 |
| TraesCS7A01G194700.1 | Wheat | nucleus | 45.61 | 29.8 |
| TraesCS7A01G569100.1 | Wheat | nucleus | 49.56 | 29.74 |
| TraesCS7A01G189200.1 | Wheat | nucleus | 44.74 | 29.23 |
| HORVU2Hr1G017350.1 | Barley | nucleus | 50.88 | 29.22 |
| TraesCS2B01G118300.1 | Wheat | cytosol | 49.56 | 29.12 |
| Zm00001d052390_P001 | Maize | nucleus | 47.37 | 29.11 |
| HORVU4Hr1G089450.1 | Barley | cytosol, mitochondrion, nucleus, peroxisome | 44.3 | 28.86 |
| HORVU3Hr1G014100.1 | Barley | cytosol, nucleus | 47.37 | 28.65 |
| OQU89451 | Sorghum | cytosol | 45.61 | 27.96 |
| TraesCS2D01G100700.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 51.75 | 27.63 |
| Zm00001d040189_P002 | Maize | mitochondrion, nucleus, peroxisome | 47.37 | 27.62 |
| HORVU2Hr1G017370.1 | Barley | cytosol, nucleus, plastid | 51.32 | 27.53 |
| EES07908 | Sorghum | nucleus, peroxisome, plastid | 47.81 | 27.46 |
| EES02651 | Sorghum | nucleus | 47.37 | 27.0 |
| KXG28945 | Sorghum | cytoskeleton, nucleus, peroxisome | 43.42 | 26.68 |
| TraesCS5A01G143100.1 | Wheat | nucleus | 46.93 | 26.55 |
| TraesCS5B01G141900.1 | Wheat | nucleus | 46.49 | 26.43 |
| EES17917 | Sorghum | cytosol | 46.49 | 26.37 |
| TraesCS5D01G148900.1 | Wheat | nucleus | 46.49 | 26.37 |
| Os12t0123800-01 | Rice | nucleus | 45.61 | 26.26 |
| Zm00001d008403_P001 | Maize | plastid | 35.96 | 25.47 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 54.39 | 24.03 |
| HORVU5Hr1G045640.7 | Barley | mitochondrion | 46.05 | 23.08 |
| Os11t0127000-01 | Rice | nucleus | 28.95 | 22.37 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr10G05070_001 |
| EnsemblPlants:GSMUA_Achr10P05070_001 | EnsemblPlants:GSMUA_Achr10T05070_001 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0RFI4 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF46 | SUPFAM:SSF101941 |
| UniParc:UPI0002957C1D | : | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G05070_001]
Coordinates
chr10:+:14698063..14699516
Molecular Weight (calculated)
26352.9 Da
IEP (calculated)
8.727
GRAVY (calculated)
-0.351
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MEECMDLPPG FRFHPTDEEI ITHYLSPKVV DHGFSARAIG DVDLNRCEPW DLPGRAKMGA KEWYFFCQRD RKYPTGTRTN RATEAGFWKA TGKDKEIFKG
101: RGVLVGMKKT LVFYRGRAPK GEKTSWVMHE YRLEGTSCLS HLPKYAKDDW VVCRILHKDV VPVLDRINID SFVGAIQHML ILSYQLSGIL SWINWPLFYG
201: STCCFHHTHT SLESIQIPIR KEHKICFG
101: RGVLVGMKKT LVFYRGRAPK GEKTSWVMHE YRLEGTSCLS HLPKYAKDDW VVCRILHKDV VPVLDRINID SFVGAIQHML ILSYQLSGIL SWINWPLFYG
201: STCCFHHTHT SLESIQIPIR KEHKICFG
001: METFGVFHKE DDEQMDLPPG FRFHPTDEEL ITHYLHKKVL DLGFSAKAIG EVDLNKAEPW ELPYKAKIGE KEWYFFCVRD RKYPTGLRTN RATQAGYWKA
101: TGKDKEIFRG KSLVGMKKTL VFYRGRAPKG QKTNWVMHEY RLDGKLSAHN LPKTAKNEWV ICRVFHKTAG GKKIPISTLI RIGSYGTGSS LPPLTDSSPY
201: NDKTKTEPVY VPCFSNQAET RGTILNCFSN PSLSSIQPDF LQMIPLYQPQ SLNISESSNP VLTQEQSVLQ AMMENNRRQN FKTLSISQET GVSNTDNSSV
301: FEFGRKRFDH QEVPSPSSGP VDLEPFWNY
101: TGKDKEIFRG KSLVGMKKTL VFYRGRAPKG QKTNWVMHEY RLDGKLSAHN LPKTAKNEWV ICRVFHKTAG GKKIPISTLI RIGSYGTGSS LPPLTDSSPY
201: NDKTKTEPVY VPCFSNQAET RGTILNCFSN PSLSSIQPDF LQMIPLYQPQ SLNISESSNP VLTQEQSVLQ AMMENNRRQN FKTLSISQET GVSNTDNSSV
301: FEFGRKRFDH QEVPSPSSGP VDLEPFWNY
Arabidopsis Description
NAC079NAC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UL34]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.