Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04060.1 | EER90487 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | KXG38822 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d022517_P001 | Maize | nucleus | 74.17 | 77.67 |
| Os07t0684800-01 | Rice | cytosol | 57.06 | 63.12 |
| HORVU2Hr1G017380.1 | Barley | cytosol, nucleus, plastid | 44.44 | 62.98 |
| CDY29982 | Canola | cytosol | 31.83 | 61.63 |
| TraesCS2D01G100800.1 | Wheat | nucleus | 49.55 | 59.78 |
| TraesCS2A01G101200.1 | Wheat | nucleus | 49.25 | 59.42 |
| TraesCS2B01G118500.1 | Wheat | cytosol | 61.56 | 58.24 |
| TraesCS2D01G100900.1 | Wheat | nucleus | 61.56 | 58.07 |
| TraesCS2A01G101400.1 | Wheat | cytosol | 60.36 | 56.94 |
| TraesCS2B01G118200.1 | Wheat | cytosol, nucleus, plastid | 59.76 | 56.7 |
| TraesCS2A01G101100.1 | Wheat | cytosol, nucleus, plastid | 58.56 | 56.03 |
| TraesCS2D01G100600.1 | Wheat | cytosol, nucleus, plastid | 61.26 | 55.43 |
| HORVU2Hr1G017360.1 | Barley | nucleus | 25.23 | 55.26 |
| EES02626 | Sorghum | cytosol | 23.42 | 54.55 |
| TraesCS2B01G118400.1 | Wheat | cytosol, nucleus, plastid | 57.36 | 54.42 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 39.34 | 53.25 |
| TraesCS2A01G101000.1 | Wheat | cytosol, nucleus, plastid | 60.06 | 52.36 |
| HORVU2Hr1G017400.3 | Barley | nucleus | 59.46 | 51.7 |
| EER92328 | Sorghum | cytosol | 53.45 | 50.0 |
| GSMUA_Achr10P... | Banana | cytosol | 34.23 | 50.0 |
| TraesCS2B01G118300.1 | Wheat | cytosol | 57.96 | 49.74 |
| HORVU2Hr1G017350.1 | Barley | nucleus | 57.96 | 48.61 |
| TraesCS2D01G100700.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 60.06 | 46.84 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 40.54 | 46.08 |
| HORVU2Hr1G017370.1 | Barley | cytosol, nucleus, plastid | 57.66 | 45.18 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 39.34 | 42.81 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 38.74 | 41.88 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 39.94 | 41.82 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 43.54 | 41.79 |
| AT5G18270.1 | Thale cress | nucleus | 41.44 | 41.19 |
| AT3G04060.1 | Thale cress | nucleus | 41.44 | 40.83 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 42.34 | 40.75 |
| Bra040153.1-P | Field mustard | nucleus | 41.14 | 39.94 |
| Bra006449.1-P | Field mustard | nucleus | 40.24 | 39.88 |
| CDY51238 | Canola | nucleus | 40.24 | 39.76 |
| CDY02636 | Canola | nucleus | 39.94 | 39.47 |
| Bra002148.1-P | Field mustard | nucleus | 39.64 | 39.29 |
| CDY53250 | Canola | nucleus | 39.64 | 39.29 |
| Bra023669.1-P | Field mustard | nucleus | 39.64 | 39.29 |
| CDX70804 | Canola | nucleus | 39.64 | 39.17 |
| CDY42901 | Canola | nucleus | 40.24 | 38.95 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 40.24 | 38.95 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 39.94 | 38.78 |
| KRG94783 | Soybean | nucleus | 45.35 | 37.28 |
| KRH06738 | Soybean | nucleus | 45.05 | 36.85 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 43.84 | 36.23 |
| KRH08479 | Soybean | nucleus | 44.14 | 35.85 |
| EES13494 | Sorghum | cytosol, nucleus, plastid | 30.33 | 34.95 |
| EER88807 | Sorghum | nucleus | 32.13 | 34.85 |
| EES10946 | Sorghum | cytosol, mitochondrion, nucleus | 37.24 | 34.83 |
| KRH70130 | Soybean | nucleus | 42.64 | 34.63 |
| EES05316 | Sorghum | nucleus | 37.54 | 34.53 |
| EER93792 | Sorghum | cytosol, mitochondrion, nucleus | 35.14 | 34.31 |
| OQU82346 | Sorghum | cytosol, nucleus, plastid | 30.33 | 32.69 |
| EER99125 | Sorghum | nucleus | 35.44 | 31.38 |
| EES07908 | Sorghum | nucleus, peroxisome, plastid | 37.24 | 31.23 |
| KXG28945 | Sorghum | cytoskeleton, nucleus, peroxisome | 34.53 | 31.0 |
| OQU79579 | Sorghum | cytosol, nucleus, peroxisome | 30.93 | 30.84 |
| EES07725 | Sorghum | cytosol | 27.63 | 30.36 |
| EES05451 | Sorghum | nucleus | 27.33 | 30.13 |
| OQU89451 | Sorghum | cytosol | 33.63 | 30.11 |
| EES14261 | Sorghum | nucleus | 30.63 | 29.91 |
| KXG26719 | Sorghum | nucleus | 25.53 | 29.31 |
| EES17917 | Sorghum | cytosol | 35.14 | 29.1 |
| EES02651 | Sorghum | nucleus | 34.83 | 29.0 |
| KXG28193 | Sorghum | cytosol | 23.42 | 27.86 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 41.74 | 26.94 |
| KXG23228 | Sorghum | plastid | 34.83 | 26.13 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:8078577 | UniProt:C5X5P9 | EnsemblPlants:EER97754 | ProteinID:EER97754 |
| ProteinID:EER97754.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 |
| InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF47 |
| EnsemblPlantsGene:SORBI_3002G421400 | SUPFAM:SSF101941 | unigene:Sbi.1420 | UniParc:UPI0001A836D6 | RefSeq:XP_002461233.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr2:+:76883885..76886170
Molecular Weight (calculated)
36391.7 Da
IEP (calculated)
6.052
GRAVY (calculated)
-0.444
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MASEVSSEIN QNQGGEEETR LDLPPGFRFH PTDEEVVSHY LTHKALNSSF SCLVIADVDL NKIEPWDLPS KAKMGEKEWY FFCHKDRKYP TGMRTNRATA
101: SGYWKATGKD KEIFRGHRVL VGMKKTLVFY TGRAPHGGKT PWVMHEYRLE GSLPSNLRRG AKDEWAVCKV FNKDLAAKAG QMAPAHAVGG GMVRSDSLAF
201: LDDLVFDNAD LPPLIDSPYA EGGLIDFNKI AGGGASSSSI AAAGTNDSAG YQVIKAEAQL PAAANNSAGG GSYSYEYQQQ AIRRLCKAEA EAPATLLLSP
301: SRGGGESSTD MFHVDDLLQL DGFMDDYSNM WKF
101: SGYWKATGKD KEIFRGHRVL VGMKKTLVFY TGRAPHGGKT PWVMHEYRLE GSLPSNLRRG AKDEWAVCKV FNKDLAAKAG QMAPAHAVGG GMVRSDSLAF
201: LDDLVFDNAD LPPLIDSPYA EGGLIDFNKI AGGGASSSSI AAAGTNDSAG YQVIKAEAQL PAAANNSAGG GSYSYEYQQQ AIRRLCKAEA EAPATLLLSP
301: SRGGGESSTD MFHVDDLLQL DGFMDDYSNM WKF
001: MAVVVEEGVV LNHGGEELVD LPPGFRFHPT DEEIITCYLK EKVLNSRFTA VAMGEADLNK CEPWDLPSKA KMGEKEFYFF CQRDRKYPTG MRTNRATESG
101: YWKATGKDKE IFKGKGCLVG MKKTLVFYRG RAPKGEKTNW VMHEYRLEGK YSYYNLPKSA RDEWVVCRVF HKNNPSTTTQ PMTRIPVEDF TRMDSLENID
201: HLLDFSSLPP LIDPSFMSQT EQPNFKPINP PTYDISSPIQ PHHFNSYQSI FNHQVFGSAS GSTYNNNNEM IKMEQSLVSV SQETCLSSDV NANMTTTTEV
301: SSGPVMKQEM GMMGMVNGSK SYEDLCDLRG DLWDF
101: YWKATGKDKE IFKGKGCLVG MKKTLVFYRG RAPKGEKTNW VMHEYRLEGK YSYYNLPKSA RDEWVVCRVF HKNNPSTTTQ PMTRIPVEDF TRMDSLENID
201: HLLDFSSLPP LIDPSFMSQT EQPNFKPINP PTYDISSPIQ PHHFNSYQSI FNHQVFGSAS GSTYNNNNEM IKMEQSLVSV SQETCLSSDV NANMTTTTEV
301: SSGPVMKQEM GMMGMVNGSK SYEDLCDLRG DLWDF
Arabidopsis Description
ANAC087NAC domain-containing protein 87 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK44]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.