Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04060.1 | EER90487 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | KXG38822 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02626 | Sorghum | cytosol | 26.25 | 73.43 |
| EES17917 | Sorghum | cytosol | 71.25 | 70.9 |
| KXG28945 | Sorghum | cytoskeleton, nucleus, peroxisome | 65.0 | 70.08 |
| Zm00001d008403_P001 | Maize | plastid | 54.75 | 68.01 |
| OQU89451 | Sorghum | cytosol | 61.75 | 66.4 |
| CDY29982 | Canola | cytosol | 25.0 | 58.14 |
| HORVU3Hr1G014090.1 | Barley | nucleus | 28.75 | 53.0 |
| TraesCS3B01G092800.1 | Wheat | cytosol | 27.5 | 51.64 |
| TraesCS3A01G077900.1 | Wheat | nucleus | 26.75 | 50.0 |
| TraesCS3D01G078500.1 | Wheat | nucleus | 27.75 | 49.33 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 29.5 | 47.97 |
| GSMUA_Achr10P... | Banana | cytosol | 27.0 | 47.37 |
| Os01t0104500-01 | Rice | cytosol, mitochondrion, nucleus | 33.75 | 42.19 |
| TraesCS7B01G094000.1 | Wheat | nucleus | 28.5 | 41.76 |
| Os01t0393100-01 | Rice | nucleus | 33.25 | 40.55 |
| TraesCS7D01G154200.1 | Wheat | nucleus | 35.5 | 39.89 |
| TraesCS7A01G152500.1 | Wheat | nucleus | 35.25 | 39.61 |
| TraesCS7B01G056300.1 | Wheat | nucleus | 35.25 | 39.5 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 30.0 | 39.22 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 29.75 | 38.64 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 28.25 | 38.57 |
| TraesCS5A01G245900.2 | Wheat | nucleus | 31.5 | 38.41 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 30.5 | 38.36 |
| HORVU7Hr1G031260.1 | Barley | nucleus | 33.25 | 37.57 |
| TraesCS7D01G543400.1 | Wheat | nucleus | 31.75 | 37.35 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 32.25 | 37.18 |
| CDY02636 | Canola | nucleus | 31.25 | 37.09 |
| Bra023669.1-P | Field mustard | nucleus | 31.0 | 36.9 |
| CDY53250 | Canola | nucleus | 31.0 | 36.9 |
| TraesCS7B01G100300.1 | Wheat | nucleus | 29.75 | 36.84 |
| HORVU7Hr1G039700.1 | Barley | nucleus | 31.75 | 36.71 |
| TraesCS7D01G196300.1 | Wheat | cytosol, nucleus, peroxisome | 32.0 | 36.68 |
| Bra002148.1-P | Field mustard | nucleus | 30.75 | 36.61 |
| TraesCS7B01G489500.2 | Wheat | cytosol | 31.75 | 36.6 |
| AT5G18270.1 | Thale cress | nucleus | 30.5 | 36.42 |
| CDX70804 | Canola | nucleus | 30.5 | 36.2 |
| TraesCS7A01G194700.1 | Wheat | nucleus | 31.5 | 36.1 |
| Bra006449.1-P | Field mustard | nucleus | 30.25 | 36.01 |
| HORVU4Hr1G089450.1 | Barley | cytosol, mitochondrion, nucleus, peroxisome | 31.5 | 36.0 |
| CDY51238 | Canola | nucleus | 30.25 | 35.91 |
| AT3G04060.1 | Thale cress | nucleus | 30.25 | 35.8 |
| TraesCS7D01G189900.1 | Wheat | nucleus | 28.75 | 35.6 |
| TraesCS3B01G092900.3 | Wheat | nucleus | 31.75 | 35.57 |
| TraesCS7A01G569300.1 | Wheat | cytosol | 32.0 | 35.36 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 30.0 | 34.99 |
| TraesCS7A01G189200.1 | Wheat | nucleus | 30.5 | 34.96 |
| Bra031950.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 30.0 | 34.88 |
| EER97754 | Sorghum | nucleus | 29.0 | 34.83 |
| HORVU7Hr1G122680.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 32.0 | 34.59 |
| CDY42901 | Canola | nucleus | 29.75 | 34.59 |
| EER92328 | Sorghum | cytosol | 30.75 | 34.55 |
| Bra040153.1-P | Field mustard | nucleus | 29.5 | 34.4 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 29.5 | 34.1 |
| EER93792 | Sorghum | cytosol, mitochondrion, nucleus | 28.75 | 33.72 |
| TraesCS7D01G543500.2 | Wheat | endoplasmic reticulum | 32.0 | 33.68 |
| TraesCS5B01G243300.1 | Wheat | nucleus | 22.5 | 33.58 |
| KRG94783 | Soybean | nucleus | 34.0 | 33.58 |
| EES13494 | Sorghum | cytosol, nucleus, plastid | 24.25 | 33.56 |
| EES05451 | Sorghum | nucleus | 25.25 | 33.44 |
| TraesCS7A01G569100.1 | Wheat | nucleus | 31.75 | 33.42 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 33.5 | 33.25 |
| EER99125 | Sorghum | nucleus | 31.0 | 32.98 |
| KRH06738 | Soybean | nucleus | 33.25 | 32.68 |
| HORVU3Hr1G014100.1 | Barley | cytosol, nucleus | 30.75 | 32.63 |
| EES10946 | Sorghum | cytosol, mitochondrion, nucleus | 29.0 | 32.58 |
| KXG26719 | Sorghum | nucleus | 23.5 | 32.41 |
| EER88807 | Sorghum | nucleus | 24.25 | 31.6 |
| EES07908 | Sorghum | nucleus, peroxisome, plastid | 30.75 | 30.98 |
| KRH70130 | Soybean | nucleus | 31.5 | 30.73 |
| KRH08479 | Soybean | nucleus | 31.25 | 30.49 |
| OQU82346 | Sorghum | cytosol, nucleus, plastid | 23.5 | 30.42 |
| EES14261 | Sorghum | nucleus | 25.75 | 30.21 |
| EES05316 | Sorghum | nucleus | 27.25 | 30.11 |
| EES07725 | Sorghum | cytosol | 22.75 | 30.03 |
| OQU79579 | Sorghum | cytosol, nucleus, peroxisome | 24.75 | 29.64 |
| KXG23228 | Sorghum | plastid | 29.0 | 26.13 |
| KXG28193 | Sorghum | cytosol | 18.0 | 25.71 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 31.5 | 24.42 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:8085048 | UniProt:C5XF21 | EnsemblPlants:EES02651 | ProteinID:EES02651 |
| ProteinID:EES02651.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 |
| InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF23 |
| EnsemblPlantsGene:SORBI_3003G105600 | SUPFAM:SSF101941 | UniParc:UPI0001A84D3F | RefSeq:XP_002457531.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr3:-:9569479..9571661
Molecular Weight (calculated)
43321.9 Da
IEP (calculated)
6.058
GRAVY (calculated)
-0.306
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEHHQPQQQ EMNVVPTSGL DLPPGFRFHP SDIEIISDYL MNKVRNTNFT CIAIGEVDVN KTEPWDLPDQ AKWGEKEWYF FNQKDRKYPT GLRANRATKA
101: GYWKATGKDK EVYKTTEGVL MLVGMKKTLV FYKGRAPRGD KTNWVMHEYR LEGSGRLLGP ASASSSIATA ATATKASTSA PMDEWVVCRV FEKTTGIKKT
201: TAPSYEVAMA STEIDQNQNN IQAIPIPMSL QLPLSVPMPM QFPIIPDFAM DPVAPYYPNA STGIPTMMPS MTGISGTSGL QINNAQFSNP IIASPQMNFY
301: HQMGMGAVAG RIDMGAAVGQ MGMGAGAGQM GMGAAVAQMD MGAAGAGGFD VVAPESRPSS MVSQKDDQAN AAEISSMMSV TDPGSATTTI EMDGIWKYKY
101: GYWKATGKDK EVYKTTEGVL MLVGMKKTLV FYKGRAPRGD KTNWVMHEYR LEGSGRLLGP ASASSSIATA ATATKASTSA PMDEWVVCRV FEKTTGIKKT
201: TAPSYEVAMA STEIDQNQNN IQAIPIPMSL QLPLSVPMPM QFPIIPDFAM DPVAPYYPNA STGIPTMMPS MTGISGTSGL QINNAQFSNP IIASPQMNFY
301: HQMGMGAVAG RIDMGAAVGQ MGMGAGAGQM GMGAAVAQMD MGAAGAGGFD VVAPESRPSS MVSQKDDQAN AAEISSMMSV TDPGSATTTI EMDGIWKYKY
001: MEENLPPGFR FHPTDEELIT HYLCRKVSDI GFTGKAVVDV DLNKCEPWDL PAKASMGEKE WYFFSQRDRK YPTGLRTNRA TEAGYWKTTG KDKEIYRSGV
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST
201: IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ
301: PQPQEEAFNM DSIW
101: LVGMKKTLVF YKGRAPKGEK SNWVMHEYRL ESKQPFNPTN KEEWVVCRVF EKSTAAKKAQ EQQPQSSQPS FGSPCDANSS MANEFEDIDE LPNLNSNSST
201: IDYNNHIHQY SQRNVYSEDN TTSTAGLNMN MNMASTNLQS WTTSLLGPPL SPINSLLLKA FQIRNSYSFP KEMIPSFNHS SLQQGVSNMI QNASSSSQVQ
301: PQPQEEAFNM DSIW
Arabidopsis Description
anac058NAC domain containing protein 58 [Source:UniProtKB/TrEMBL;Acc:Q9LS50]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.