Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d031463_P002 | Maize | mitochondrion | 89.74 | 72.51 |
| TraesCS7B01G143900.1 | Wheat | nucleus | 68.62 | 70.06 |
| TraesCS7D01G246100.1 | Wheat | cytosol | 68.04 | 69.25 |
| TraesCS7A01G247600.1 | Wheat | extracellular | 68.33 | 69.14 |
| Os08t0511200-00 | Rice | cytosol | 68.33 | 67.15 |
| EES02626 | Sorghum | cytosol | 22.29 | 53.15 |
| GSMUA_Achr9P20090_001 | Banana | cytosol | 46.63 | 50.16 |
| PGSC0003DMT400025690 | Potato | nucleus | 44.87 | 43.1 |
| Bra008259.1-P | Field mustard | cytosol | 37.83 | 40.31 |
| CDY20411 | Canola | cytosol | 37.83 | 40.19 |
| CDY45986 | Canola | cytosol | 37.54 | 40.0 |
| Bra015750.1-P | Field mustard | cytosol | 38.42 | 39.1 |
| CDX87602 | Canola | cytosol | 38.42 | 39.1 |
| CDX88273 | Canola | cytosol | 38.42 | 38.87 |
| AT1G76420.1 | Thale cress | cytosol | 37.54 | 38.32 |
| KRH60880 | Soybean | nucleus | 38.71 | 37.71 |
| VIT_18s0122g00800.t01 | Wine grape | nucleus | 46.33 | 37.18 |
| KRH51562 | Soybean | nucleus | 40.18 | 36.63 |
| EER93792 | Sorghum | cytosol, mitochondrion, nucleus | 34.31 | 34.31 |
| KXG26719 | Sorghum | nucleus | 28.74 | 33.79 |
| EES05451 | Sorghum | nucleus | 29.91 | 33.77 |
| EES13494 | Sorghum | cytosol, nucleus, plastid | 26.98 | 31.83 |
| EES07725 | Sorghum | cytosol | 28.15 | 31.68 |
| EER99125 | Sorghum | nucleus | 34.6 | 31.38 |
| EER88807 | Sorghum | nucleus | 28.15 | 31.27 |
| OQU82346 | Sorghum | cytosol, nucleus, plastid | 28.15 | 31.07 |
| EER97754 | Sorghum | nucleus | 29.91 | 30.63 |
| EES10946 | Sorghum | cytosol, mitochondrion, nucleus | 30.79 | 29.49 |
| EES05316 | Sorghum | nucleus | 31.09 | 29.28 |
| OQU79579 | Sorghum | cytosol, nucleus, peroxisome | 28.45 | 29.04 |
| KXG28945 | Sorghum | cytoskeleton, nucleus, peroxisome | 31.38 | 28.84 |
| EER92328 | Sorghum | cytosol | 29.62 | 28.37 |
| OQU89451 | Sorghum | cytosol | 30.79 | 28.23 |
| KXG23228 | Sorghum | plastid | 36.36 | 27.93 |
| EES07908 | Sorghum | nucleus, peroxisome, plastid | 32.26 | 27.71 |
| EES17917 | Sorghum | cytosol | 32.55 | 27.61 |
| EES02651 | Sorghum | nucleus | 30.21 | 25.75 |
| KXG28193 | Sorghum | cytosol | 20.53 | 25.0 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | EntrezGene:8064020 | UniProt:C5YIR1 | EnsemblPlants:EES14261 | ProteinID:EES14261 |
| ProteinID:EES14261.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 |
| InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 | PANTHER:PTHR31744:SF44 |
| EnsemblPlantsGene:SORBI_3007G209200 | SUPFAM:SSF101941 | UniParc:UPI0001A87EA7 | RefSeq:XP_002444766.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr7:+:63801241..63803995
Molecular Weight (calculated)
37321.7 Da
IEP (calculated)
6.976
GRAVY (calculated)
-0.416
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MQHQVQDHHQ AMGDTLWDLL GEEMAAAGGE HGLPPGFRFH PTDEELVTFY LAAKVFNGAC CGIDIAEVDL NRCEPWELPD AARMGEREWY FFSLRDRKYP
101: TGLRTNRATG AGYWKATGKD REVLNAATGA LLGMKKTLVF YKGRAPRGEK TKWVLHEYRL DGDFAAARRP CKEEWVICRI LHKAGDLYSK LMMVKNPYYL
201: PMAMEPSSFC FQQEPTAHPL TNPSGGCTIP LGLPFHHGHP GMQPPSPSNH GNKQVVFAGA AGCCMQQEPP NGSNSAVLPM PPFPPFTPIV AGKPAAPAPP
301: PQVGVNAGPQ EPPPPTWLEA YLQHSDGILY EMGPAAAPRG A
101: TGLRTNRATG AGYWKATGKD REVLNAATGA LLGMKKTLVF YKGRAPRGEK TKWVLHEYRL DGDFAAARRP CKEEWVICRI LHKAGDLYSK LMMVKNPYYL
201: PMAMEPSSFC FQQEPTAHPL TNPSGGCTIP LGLPFHHGHP GMQPPSPSNH GNKQVVFAGA AGCCMQQEPP NGSNSAVLPM PPFPPFTPIV AGKPAAPAPP
301: PQVGVNAGPQ EPPPPTWLEA YLQHSDGILY EMGPAAAPRG A
001: MMLAVEDVLS ELAGEERNER GLPPGFRFHP TDEELITFYL ASKIFHGGLS GIHISEVDLN RCEPWELPEM AKMGEREWYF YSLRDRKYPT GLRTNRATTA
101: GYWKATGKDK EVFSGGGGQL VGMKKTLVFY KGRAPRGLKT KWVMHEYRLE NDHSHRHTCK EEWVICRVFN KTGDRKNVGL IHNQISYLHN HSLSTTHHHH
201: HEALPLLIEP SNKTLTNFPS LLYDDPHQNY NNNNFLHGSS GHNIDELKAL INPVVSQLNG IIFPSGNNNN DEDDFDFNLG VKTEQSSNGN EIDVRDYLEN
301: PLFQEASYGL LGFSSSPGPL HMLLDSPCPL GFQL
101: GYWKATGKDK EVFSGGGGQL VGMKKTLVFY KGRAPRGLKT KWVMHEYRLE NDHSHRHTCK EEWVICRVFN KTGDRKNVGL IHNQISYLHN HSLSTTHHHH
201: HEALPLLIEP SNKTLTNFPS LLYDDPHQNY NNNNFLHGSS GHNIDELKAL INPVVSQLNG IIFPSGNNNN DEDDFDFNLG VKTEQSSNGN EIDVRDYLEN
301: PLFQEASYGL LGFSSSPGPL HMLLDSPCPL GFQL
Arabidopsis Description
NAC031Protein CUP-SHAPED COTYLEDON 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S851]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.