Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G246100.1 | Wheat | cytosol | 98.5 | 98.21 |
| TraesCS7A01G247600.1 | Wheat | extracellular | 98.5 | 97.63 |
| Os08t0511200-00 | Rice | cytosol | 74.85 | 72.05 |
| EES14261 | Sorghum | nucleus | 70.06 | 68.62 |
| Zm00001d031463_P002 | Maize | mitochondrion | 71.26 | 56.4 |
| GSMUA_Achr9P20090_001 | Banana | cytosol | 46.41 | 48.9 |
| TraesCS3B01G092800.1 | Wheat | cytosol | 29.64 | 46.48 |
| TraesCS6B01G416500.1 | Wheat | nucleus | 25.45 | 44.5 |
| PGSC0003DMT400025690 | Potato | nucleus | 45.51 | 42.82 |
| Bra008259.1-P | Field mustard | cytosol | 37.72 | 39.38 |
| CDY45986 | Canola | cytosol | 37.43 | 39.06 |
| CDY20411 | Canola | cytosol | 37.43 | 38.94 |
| Bra015750.1-P | Field mustard | cytosol | 38.62 | 38.51 |
| CDX87602 | Canola | cytosol | 38.62 | 38.51 |
| TraesCS4B01G072400.1 | Wheat | cytosol, mitochondrion, nucleus | 34.43 | 38.46 |
| CDX88273 | Canola | cytosol | 38.62 | 38.28 |
| TraesCS7B01G094000.1 | Wheat | nucleus | 31.14 | 38.1 |
| AT1G76420.1 | Thale cress | cytosol | 37.43 | 37.43 |
| VIT_18s0122g00800.t01 | Wine grape | nucleus | 47.01 | 36.94 |
| KRH60880 | Soybean | nucleus | 38.32 | 36.57 |
| KRH51562 | Soybean | nucleus | 40.12 | 35.83 |
| TraesCS7B01G100300.1 | Wheat | nucleus | 33.53 | 34.67 |
| TraesCS7B01G205600.1 | Wheat | cytosol | 29.64 | 33.9 |
| TraesCS2B01G484100.1 | Wheat | cytosol, nucleus, plastid | 28.44 | 32.99 |
| TraesCS7B01G056300.1 | Wheat | nucleus | 35.03 | 32.77 |
| TraesCS7B01G489500.2 | Wheat | cytosol | 33.83 | 32.56 |
| TraesCS5B01G275200.1 | Wheat | nucleus | 35.03 | 31.79 |
| TraesCS2B01G399700.1 | Wheat | cytosol, mitochondrion, nucleus | 28.74 | 31.27 |
| TraesCS7B01G365300.1 | Wheat | nucleus | 28.44 | 31.15 |
| TraesCS4B01G174000.1 | Wheat | cytosol | 31.74 | 31.09 |
| TraesCS6B01G416400.1 | Wheat | nucleus | 27.54 | 30.98 |
| TraesCS7B01G364600.1 | Wheat | nucleus | 28.44 | 30.94 |
| TraesCS5B01G054200.2 | Wheat | cytosol, nucleus, peroxisome | 28.44 | 30.94 |
| TraesCS2B01G118500.1 | Wheat | cytosol | 32.34 | 30.68 |
| TraesCS7B01G246300.1 | Wheat | nucleus | 33.23 | 30.66 |
| TraesCS3B01G092900.3 | Wheat | nucleus | 32.63 | 30.53 |
| TraesCS5B01G243300.1 | Wheat | nucleus | 23.95 | 29.85 |
| TraesCS6B01G416300.1 | Wheat | nucleus | 27.54 | 29.77 |
| TraesCS2B01G343600.1 | Wheat | nucleus | 31.14 | 29.38 |
| TraesCS2B01G118200.1 | Wheat | cytosol, nucleus, plastid | 30.54 | 29.06 |
| TraesCS2B01G118400.1 | Wheat | cytosol, nucleus, plastid | 29.94 | 28.49 |
| TraesCS5B01G141900.1 | Wheat | nucleus | 31.14 | 25.94 |
| TraesCS2B01G118300.1 | Wheat | cytosol | 29.04 | 25.0 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31744 | PANTHER:PTHR31744:SF44 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS7B01G143900 | EnsemblPlants:TraesCS7B01G143900.1 | SEG:seg |
Description
No Description!
Coordinates
chr7B:-:185059586..185061402
Molecular Weight (calculated)
36999.8 Da
IEP (calculated)
7.109
GRAVY (calculated)
-0.529
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MHQHQHQPAA AMGDALWELI GEEMAAAEAA AGEHGLPPGF RFHPTDEELV TFYLAAKVFN GACCGGVDIA EVDLNRCEPW DLPEAARMGE REWYFFSLRD
101: RKYPTGLRTN RATGAGYWKA TGKDREVLNA ATGSLLGMKK TLVFYRGRAP RGEKTKWVLH EYRLDGDFGA ARRSCKEEWV VCRIFHKAVD PYSKMMEMRN
201: PYCYFPMSPH HPSFFQDAPP APLPNPSQLI FHHDLPNLQS SPLMQSQGQA KNTSSNNGGF PAAACVQEQP NSSCNQAYFP FPPFASIVNG KAGPPAQPRV
301: NGGPQEPPPT WLDACLQHST FMYEMGPPAA TRGA
101: RKYPTGLRTN RATGAGYWKA TGKDREVLNA ATGSLLGMKK TLVFYRGRAP RGEKTKWVLH EYRLDGDFGA ARRSCKEEWV VCRIFHKAVD PYSKMMEMRN
201: PYCYFPMSPH HPSFFQDAPP APLPNPSQLI FHHDLPNLQS SPLMQSQGQA KNTSSNNGGF PAAACVQEQP NSSCNQAYFP FPPFASIVNG KAGPPAQPRV
301: NGGPQEPPPT WLDACLQHST FMYEMGPPAA TRGA
001: MMLAVEDVLS ELAGEERNER GLPPGFRFHP TDEELITFYL ASKIFHGGLS GIHISEVDLN RCEPWELPEM AKMGEREWYF YSLRDRKYPT GLRTNRATTA
101: GYWKATGKDK EVFSGGGGQL VGMKKTLVFY KGRAPRGLKT KWVMHEYRLE NDHSHRHTCK EEWVICRVFN KTGDRKNVGL IHNQISYLHN HSLSTTHHHH
201: HEALPLLIEP SNKTLTNFPS LLYDDPHQNY NNNNFLHGSS GHNIDELKAL INPVVSQLNG IIFPSGNNNN DEDDFDFNLG VKTEQSSNGN EIDVRDYLEN
301: PLFQEASYGL LGFSSSPGPL HMLLDSPCPL GFQL
101: GYWKATGKDK EVFSGGGGQL VGMKKTLVFY KGRAPRGLKT KWVMHEYRLE NDHSHRHTCK EEWVICRVFN KTGDRKNVGL IHNQISYLHN HSLSTTHHHH
201: HEALPLLIEP SNKTLTNFPS LLYDDPHQNY NNNNFLHGSS GHNIDELKAL INPVVSQLNG IIFPSGNNNN DEDDFDFNLG VKTEQSSNGN EIDVRDYLEN
301: PLFQEASYGL LGFSSSPGPL HMLLDSPCPL GFQL
Arabidopsis Description
NAC031Protein CUP-SHAPED COTYLEDON 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S851]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.