Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G342300.1 | Wheat | nucleus | 97.79 | 97.79 |
| TraesCS7A01G334800.1 | Wheat | nucleus | 96.13 | 95.87 |
| HORVU7Hr1G082420.2 | Barley | nucleus | 95.86 | 88.52 |
| Os06t0344900-00 | Rice | cytosol, nucleus, plastid | 71.82 | 69.71 |
| Zm00001d035266_P001 | Maize | nucleus | 67.4 | 68.35 |
| Zm00001d041791_P001 | Maize | nucleus | 63.54 | 62.5 |
| KXG23228 | Sorghum | plastid | 72.93 | 59.46 |
| TraesCS3B01G092800.1 | Wheat | cytosol | 27.62 | 46.95 |
| TraesCS6B01G416500.1 | Wheat | nucleus | 24.31 | 46.07 |
| KRH27280 | Soybean | nucleus | 43.65 | 46.06 |
| GSMUA_Achr10P... | Banana | cytosol | 44.2 | 45.07 |
| VIT_19s0014g02200.t01 | Wine grape | nucleus | 44.75 | 44.63 |
| KRH22042 | Soybean | nucleus | 43.37 | 44.6 |
| GSMUA_Achr10P... | Banana | nucleus | 40.61 | 44.28 |
| CDX75813 | Canola | nucleus | 37.02 | 43.51 |
| CDX82444 | Canola | nucleus | 37.02 | 43.37 |
| Bra001586.1-P | Field mustard | nucleus | 37.02 | 43.37 |
| Solyc07g062840.2.1 | Tomato | nucleus | 41.99 | 43.18 |
| KRH55187 | Soybean | nucleus | 44.2 | 42.67 |
| CDY32316 | Canola | nucleus | 35.91 | 42.35 |
| AT3G15170.1 | Thale cress | nucleus | 36.19 | 42.26 |
| CDY20103 | Canola | nucleus | 35.36 | 42.24 |
| Bra021592.1-P | Field mustard | nucleus | 35.36 | 42.24 |
| KRH26232 | Soybean | nucleus | 42.54 | 42.08 |
| TraesCS4B01G072400.1 | Wheat | cytosol, mitochondrion, nucleus | 34.53 | 41.81 |
| CDY28805 | Canola | nucleus | 41.44 | 40.87 |
| Bra022685.1-P | Field mustard | nucleus | 41.44 | 40.87 |
| Bra003023.1-P | Field mustard | nucleus | 40.06 | 40.62 |
| CDX96262 | Canola | nucleus | 41.16 | 40.6 |
| AT5G53950.1 | Thale cress | nucleus | 41.71 | 40.27 |
| CDX98529 | Canola | mitochondrion | 28.18 | 37.36 |
| CDX99695 | Canola | mitochondrion | 28.18 | 37.36 |
| TraesCS2B01G484100.1 | Wheat | cytosol, nucleus, plastid | 29.28 | 36.81 |
| TraesCS7B01G094000.1 | Wheat | nucleus | 27.62 | 36.63 |
| PGSC0003DMT400032280 | Potato | nucleus | 29.01 | 36.59 |
| TraesCS5B01G054200.2 | Wheat | cytosol, nucleus, peroxisome | 30.39 | 35.83 |
| TraesCS7B01G205600.1 | Wheat | cytosol | 28.73 | 35.62 |
| TraesCS7B01G365300.1 | Wheat | nucleus | 29.56 | 35.08 |
| TraesCS7B01G364600.1 | Wheat | nucleus | 29.28 | 34.53 |
| TraesCS5B01G275200.1 | Wheat | nucleus | 34.81 | 34.24 |
| TraesCS4B01G174000.1 | Wheat | cytosol | 32.04 | 34.02 |
| TraesCS7B01G143900.1 | Wheat | nucleus | 30.66 | 33.23 |
| TraesCS7B01G100300.1 | Wheat | nucleus | 29.28 | 32.82 |
| TraesCS6B01G416400.1 | Wheat | nucleus | 26.8 | 32.66 |
| TraesCS2B01G399700.1 | Wheat | cytosol, mitochondrion, nucleus | 27.07 | 31.92 |
| TraesCS5B01G243300.1 | Wheat | nucleus | 23.48 | 31.72 |
| TraesCS6B01G416300.1 | Wheat | nucleus | 27.07 | 31.72 |
| TraesCS7B01G056300.1 | Wheat | nucleus | 31.22 | 31.65 |
| TraesCS2B01G118200.1 | Wheat | cytosol, nucleus, plastid | 30.66 | 31.62 |
| TraesCS2B01G343600.1 | Wheat | nucleus | 30.39 | 31.07 |
| TraesCS2B01G118400.1 | Wheat | cytosol, nucleus, plastid | 30.11 | 31.05 |
| TraesCS2B01G118500.1 | Wheat | cytosol | 30.11 | 30.97 |
| TraesCS7B01G489500.2 | Wheat | cytosol | 29.28 | 30.55 |
| TraesCS3B01G092900.3 | Wheat | nucleus | 29.83 | 30.25 |
| TraesCS5B01G141900.1 | Wheat | nucleus | 32.32 | 29.18 |
| TraesCS2B01G118300.1 | Wheat | cytosol | 28.73 | 26.8 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31744 | PANTHER:PTHR31744:SF48 | SUPFAM:SSF101941 | EnsemblPlantsGene:TraesCS7B01G246300 | EnsemblPlants:TraesCS7B01G246300.1 | SEG:seg |
Description
No Description!
Coordinates
chr7B:-:455270320..455272240
Molecular Weight (calculated)
38943.0 Da
IEP (calculated)
8.532
GRAVY (calculated)
-0.356
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MERYGSLGMR LDGGGGELPP GFRFHPTDEE LITYYLLRKV VDCGFSGARA IAEIDLNKCE PWELPDKACK TTAEKEWYFY SLRDRKYPTG LRTNRATGAG
101: YWKATGKDRE IRSARNGALV GMKKTLVFYR GRAPKGQKTQ WVMHEFRLEG VYAYHFLPNN TTRDEWVIAK IFVKPGAVPP SRKARYGLSS AGDTSCFSDS
201: TSVSIGGGGG ASASSAPRQQ LPDTSSLLAA AHAAADGESS SYGATANNNA AGNCRELVPC FSTAHMDATL LGIGQYEPVT LAVEQPLAFF QGSRLVQAAD
301: NLSLPMFLPG GLQSGVSPLG MGGGTFQHWP PSGYDIKLEG SRAPPQMAVG PGQLDGAYGW GF
101: YWKATGKDRE IRSARNGALV GMKKTLVFYR GRAPKGQKTQ WVMHEFRLEG VYAYHFLPNN TTRDEWVIAK IFVKPGAVPP SRKARYGLSS AGDTSCFSDS
201: TSVSIGGGGG ASASSAPRQQ LPDTSSLLAA AHAAADGESS SYGATANNNA AGNCRELVPC FSTAHMDATL LGIGQYEPVT LAVEQPLAFF QGSRLVQAAD
301: NLSLPMFLPG GLQSGVSPLG MGGGTFQHWP PSGYDIKLEG SRAPPQMAVG PGQLDGAYGW GF
001: MDIPYYHYDH GGDSQYLPPG FRFHPTDEEL ITHYLLRKVL DGCFSSRAIA EVDLNKCEPW QLPGRAKMGE KEWYFFSLRD RKYPTGLRTN RATEAGYWKA
101: TGKDREIFSS KTCALVGMKK TLVFYKGRAP KGEKSNWVMH EYRLEGKFSY HFISRSSKDE WVISRVFQKT TLASTGAVSE GGGGGGATVS VSSGTGPSKK
201: TKVPSTISRN YQEQPSSPSS VSLPPLLDPT TTLGYTDSSC SYDSRSTNTT VTASAITEHV SCFSTVPTTT TALGLDVNSF SRLPPPLGFD FDPFPRFVSR
301: NVSTQSNFRS FQENFNQFPY FGSSSASTMT SAVNLPSFQG GGGVSGMNYW LPATAEENES KVGVLHAGLD CIWNY
101: TGKDREIFSS KTCALVGMKK TLVFYKGRAP KGEKSNWVMH EYRLEGKFSY HFISRSSKDE WVISRVFQKT TLASTGAVSE GGGGGGATVS VSSGTGPSKK
201: TKVPSTISRN YQEQPSSPSS VSLPPLLDPT TTLGYTDSSC SYDSRSTNTT VTASAITEHV SCFSTVPTTT TALGLDVNSF SRLPPPLGFD FDPFPRFVSR
301: NVSTQSNFRS FQENFNQFPY FGSSSASTMT SAVNLPSFQG GGGVSGMNYW LPATAEENES KVGVLHAGLD CIWNY
Arabidopsis Description
NAC098Protein CUP-SHAPED COTYLEDON 2 [Source:UniProtKB/Swiss-Prot;Acc:O04017]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.