Factsheet for TraesCS6B01G416300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G378600.1	Wheat	nucleus	92.56	93.46
TraesCS6D01G362900.1	Wheat	nucleus	91.26	93.07
HORVU0Hr1G017490.7	Barley	nucleus	92.88	92.28
TraesCS6B01G416400.1	Wheat	nucleus	80.91	84.18
TraesCS6B01G416500.1	Wheat	nucleus	47.57	76.96
CDY51707	Canola	cytosol	34.3	67.09
EES07725	Sorghum	cytosol	63.43	64.69
CDX92881	Canola	cytosol	33.98	64.42
Zm00001d018435_P001	Maize	cytosol, mitochondrion, nucleus	61.16	63.85
Zm00001d051956_P001	Maize	cytosol, mitochondrion, nucleus	61.16	63.42
Os02t0810900-01	Rice	nucleus	67.31	62.84
GSMUA_Achr11P...	Banana	nucleus	47.9	56.49
GSMUA_Achr5P18670_001	Banana	nucleus	48.22	54.58
GSMUA_Achr8P18980_001	Banana	nucleus	47.57	53.85
GSMUA_Achr11P...	Banana	nucleus	46.6	51.8
GSMUA_AchrUn_...	Banana	nucleus	42.72	51.36
GSMUA_Achr1P20530_001	Banana	cytosol, nucleus, plastid	45.31	50.54
GSMUA_Achr6P36550_001	Banana	nucleus	45.31	50.36
GSMUA_AchrUn_...	Banana	nucleus	47.25	50.34
GSMUA_Achr1P10860_001	Banana	nucleus	45.95	48.8
Solyc09g025310.2.1	Tomato	nucleus	42.39	48.52
TraesCS2B01G399700.1	Wheat	cytosol, mitochondrion, nucleus	47.57	47.88
PGSC0003DMT400026644	Potato	cytosol, nucleus, peroxisome	42.72	47.65
KRG95684	Soybean	cytosol, nucleus, peroxisome	43.69	45.92
KRH32193	Soybean	cytosol, nucleus, plastid	43.69	45.61
KRH67403	Soybean	cytosol, nucleus, plastid	43.69	45.61
Solyc06g008360.2.1	Tomato	nucleus	40.78	44.68
PGSC0003DMT400065559	Potato	nucleus	40.45	44.33
PGSC0003DMT400051915	Potato	cytosol	38.51	41.9
VIT_07s0005g03610.t01	Wine grape	mitochondrion, nucleus	32.69	41.22
TraesCS3B01G092800.1	Wheat	cytosol	27.18	39.44
CDY14236	Canola	cytosol	41.1	37.8
TraesCS2B01G484100.1	Wheat	cytosol, nucleus, plastid	34.95	37.5
CDX97445	Canola	cytosol	40.78	37.5
CDY35197	Canola	nucleus	40.45	37.43
Bra010362.1-P	Field mustard	nucleus	41.1	36.6
AT4G28530.1	Thale cress	nucleus	41.42	36.36
Bra011037.1-P	Field mustard	nucleus	40.45	36.34
CDY38380	Canola	nucleus	40.45	36.34
Bra024194.1-P	Field mustard	nucleus	41.1	36.18
TraesCS7B01G364600.1	Wheat	nucleus	35.28	35.5
TraesCS7B01G365300.1	Wheat	nucleus	34.95	35.41
TraesCS7B01G205600.1	Wheat	cytosol	33.01	34.93
TraesCS5B01G054200.2	Wheat	cytosol, nucleus, peroxisome	34.3	34.53
TraesCS7B01G094000.1	Wheat	nucleus	27.83	31.5
TraesCS4B01G072400.1	Wheat	cytosol, mitochondrion, nucleus	30.1	31.1
TraesCS2B01G343600.1	Wheat	nucleus	33.33	29.1
TraesCS7B01G143900.1	Wheat	nucleus	29.77	27.54
TraesCS7B01G246300.1	Wheat	nucleus	31.72	27.07
TraesCS4B01G174000.1	Wheat	cytosol	29.77	26.98
TraesCS2B01G118200.1	Wheat	cytosol, nucleus, plastid	30.1	26.5
TraesCS2B01G118500.1	Wheat	cytosol	30.1	26.42
TraesCS5B01G275200.1	Wheat	nucleus	31.39	26.36
TraesCS7B01G056300.1	Wheat	nucleus	30.42	26.33
TraesCS7B01G100300.1	Wheat	nucleus	27.18	26.01
TraesCS2B01G118400.1	Wheat	cytosol, nucleus, plastid	29.45	25.93
TraesCS5B01G243300.1	Wheat	nucleus	22.33	25.75
TraesCS7B01G489500.2	Wheat	cytosol	28.8	25.65
TraesCS3B01G092900.3	Wheat	nucleus	28.8	24.93
TraesCS2B01G118300.1	Wheat	cytosol	28.16	22.42
TraesCS5B01G141900.1	Wheat	nucleus	28.16	21.7
CDX92880	Canola	nucleus	8.74	13.64
CDY51708	Canola	nucleus	8.74	13.57

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005
PANTHER:PTHR31744	PANTHER:PTHR31744:SF26	SUPFAM:SSF101941	EnsemblPlantsGene:TraesCS6B01G416300	EnsemblPlants:TraesCS6B01G416300.1	SEG:seg

Description

No Description!

Coordinates

chr6B:-:688605702..688607572

Molecular Weight (calculated)

34172.2 Da

IEP (calculated)

7.063

GRAVY (calculated)

-0.506

Length

309 amino acids

Sequence
(BLAST)

001: MGLRDIEMTL PPGFRFYPSD EELVCHYLHG KVANQRFAGG ATGTMVEVDL HVHEPWELPD VAKLSTNEWY FFSFRDRKYA TGLRTNRATR SGYWKATGKD
101: RVIRSPRSSS SRSGRAAIVG MRKTLVFYRG RAPNGSKTCW VMHEFRIENP HSPPKEDWVL CRVFHKKKAD TEYAMDGEQV IIGGMTRNAT AVSGSNYVSS
201: SSCHDPDQYH HSPPAALFPS LGAGGHPYQL TSCDHHPHGS IGVSLTDVDP FAGMPPLLSY DSIVDFSQQL QGGGAAAGLR DGAGDQCGGE LMDLGLQVQE
301: EHYNYNSLM

Best Arabidopsis Sequence Match ( AT2G24430.1 )
(BLAST)

001: MEQGDHQQHK KEEEALPPGF RFHPTDEELI SYYLVNKIAD QNFTGKAIAD VDLNKSEPWE LPEKAKMGGK EWYFFSLRDR KYPTGVRTNR ATNTGYWKTT
101: GKDKEIFNST TSELVGMKKT LVFYRGRAPR GEKTCWVMHE YRLHSKSSYR TSKQDEWVVC RVFKKTEATK KYISTSSSST SHHHNNHTRA SILSTNNNNP
201: NYSSDLLQLP PHLQPHPSLN INQSLMANAV HLAELSRVFR ASTSTTMDSS HQQLMNYTHM PVSGLNLNLG GALVQPPPVV SLEDVAAVSA SYNGENGFGN
301: VEMSQCMDLD GYWPSY

Arabidopsis Description

ANAC038NAC domain containing protein 38 [Source:UniProtKB/TrEMBL;Acc:Q9ZQ25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.