Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011037.1-P | Field mustard | nucleus | 100.0 | 97.09 |
| CDY38380 | Canola | nucleus | 97.01 | 94.19 |
| CDY51707 | Canola | cytosol | 42.81 | 90.51 |
| CDX92881 | Canola | cytosol | 42.52 | 87.12 |
| AT4G28530.1 | Thale cress | nucleus | 86.53 | 82.1 |
| CDX97445 | Canola | cytosol | 82.04 | 81.55 |
| CDY14236 | Canola | cytosol | 82.04 | 81.55 |
| CDX92880 | Canola | nucleus | 47.01 | 79.29 |
| CDY51708 | Canola | nucleus | 46.11 | 77.39 |
| Solyc09g025310.2.1 | Tomato | nucleus | 44.61 | 55.19 |
| TraesCS6B01G416500.1 | Wheat | nucleus | 31.14 | 54.45 |
| KRG95684 | Soybean | cytosol, nucleus, peroxisome | 47.6 | 54.08 |
| KRH32193 | Soybean | cytosol, nucleus, plastid | 47.9 | 54.05 |
| PGSC0003DMT400026644 | Potato | cytosol, nucleus, peroxisome | 44.31 | 53.43 |
| KRH67403 | Soybean | cytosol, nucleus, plastid | 47.31 | 53.38 |
| GSMUA_Achr11P... | Banana | nucleus | 39.22 | 50.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.52 | 48.97 |
| PGSC0003DMT400051915 | Potato | cytosol | 41.62 | 48.94 |
| GSMUA_Achr5P18670_001 | Banana | nucleus | 39.22 | 47.99 |
| GSMUA_Achr1P10860_001 | Banana | nucleus | 41.32 | 47.42 |
| GSMUA_Achr8P18980_001 | Banana | nucleus | 38.62 | 47.25 |
| Os04t0515900-01 | Rice | nucleus | 39.22 | 47.12 |
| GSMUA_Achr1P20530_001 | Banana | cytosol, nucleus, plastid | 38.62 | 46.57 |
| CDY29982 | Canola | cytosol | 23.95 | 46.51 |
| GSMUA_Achr6P36550_001 | Banana | nucleus | 38.62 | 46.4 |
| VIT_07s0005g03610.t01 | Wine grape | mitochondrion, nucleus | 33.53 | 45.71 |
| GSMUA_Achr11P... | Banana | nucleus | 37.72 | 45.32 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.73 | 45.14 |
| HORVU2Hr1G089210.4 | Barley | cytosol, mitochondrion, nucleus | 38.02 | 45.04 |
| CDY68680 | Canola | nucleus | 28.14 | 44.76 |
| CDY70041 | Canola | nucleus | 28.14 | 43.93 |
| Zm00001d051956_P001 | Maize | cytosol, mitochondrion, nucleus | 38.32 | 42.95 |
| TraesCS6B01G416400.1 | Wheat | nucleus | 37.72 | 42.42 |
| Zm00001d025861_P001 | Maize | cytosol, nucleus, plastid | 37.13 | 42.32 |
| EES07725 | Sorghum | cytosol | 38.32 | 42.24 |
| Zm00001d018435_P001 | Maize | cytosol, mitochondrion, nucleus | 37.43 | 42.23 |
| EES05451 | Sorghum | nucleus | 38.02 | 42.05 |
| Zm00001d051140_P001 | Maize | cytosol, mitochondrion, nucleus | 36.83 | 41.84 |
| Zm00001d003052_P001 | Maize | cytosol, mitochondrion, nucleus | 37.13 | 41.75 |
| KXG26719 | Sorghum | nucleus | 36.23 | 41.72 |
| TraesCS6A01G378600.1 | Wheat | nucleus | 38.02 | 41.5 |
| TraesCS2A01G382400.1 | Wheat | nucleus | 38.32 | 41.29 |
| TraesCS6D01G362900.1 | Wheat | nucleus | 37.43 | 41.25 |
| TraesCS2B01G399700.1 | Wheat | cytosol, mitochondrion, nucleus | 37.72 | 41.04 |
| TraesCS2D01G378800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 38.32 | 40.63 |
| TraesCS6A01G378500.1 | Wheat | nucleus | 37.72 | 40.51 |
| TraesCS6B01G416300.1 | Wheat | nucleus | 37.43 | 40.45 |
| HORVU0Hr1G017490.7 | Barley | nucleus | 37.43 | 40.19 |
| Os10t0477600-01 | Rice | nucleus | 38.92 | 40.12 |
| TraesCS6D01G362800.1 | Wheat | nucleus | 37.43 | 40.06 |
| CDY51910 | Canola | nucleus | 28.74 | 38.4 |
| Os03t0109000-01 | Rice | nucleus | 34.13 | 38.38 |
| Os02t0810900-01 | Rice | nucleus | 37.13 | 37.46 |
| CDY23558 | Canola | nucleus | 30.54 | 37.23 |
| CDY60115 | Canola | nucleus | 30.84 | 36.92 |
| CDX82566 | Canola | nucleus | 30.24 | 36.46 |
| CDX75966 | Canola | nucleus | 28.74 | 34.16 |
| CDY18519 | Canola | nucleus | 30.54 | 33.77 |
| CDY64672 | Canola | nucleus | 28.44 | 33.57 |
| CDY69369 | Canola | nucleus | 30.54 | 33.55 |
| CDY66026 | Canola | cytoskeleton, cytosol, nucleus | 25.75 | 33.2 |
| CDY69936 | Canola | nucleus | 27.84 | 32.86 |
| CDY42401 | Canola | nucleus | 31.44 | 32.71 |
| CDY10515 | Canola | nucleus | 31.44 | 32.61 |
| CDY51941 | Canola | nucleus | 29.04 | 32.44 |
| CDY67593 | Canola | nucleus | 29.64 | 32.25 |
| CDX67433 | Canola | nucleus | 27.54 | 31.94 |
| CDY37008 | Canola | nucleus | 27.25 | 31.6 |
| CDY30258 | Canola | nucleus | 26.95 | 31.14 |
| CDX74442 | Canola | nucleus | 26.65 | 30.8 |
| CDY14030 | Canola | nucleus | 29.04 | 30.79 |
| CDY56940 | Canola | nucleus | 29.94 | 30.58 |
| CDY40775 | Canola | nucleus | 29.04 | 29.94 |
| CDY42875 | Canola | nucleus | 29.04 | 29.85 |
| CDX85242 | Canola | cytosol | 28.44 | 29.59 |
| CDX86391 | Canola | cytoskeleton, cytosol, nucleus | 27.25 | 29.45 |
| CDY20314 | Canola | nucleus | 27.25 | 28.71 |
| CDY34773 | Canola | nucleus | 26.95 | 28.39 |
| CDX76817 | Canola | nucleus | 26.95 | 28.39 |
| CDY20103 | Canola | nucleus | 25.75 | 28.38 |
| CDX87602 | Canola | cytosol | 28.44 | 28.36 |
| CDY20411 | Canola | cytosol | 27.25 | 28.35 |
| CDX70804 | Canola | nucleus | 28.44 | 28.19 |
| CDX88273 | Canola | cytosol | 28.44 | 28.19 |
| CDY51238 | Canola | nucleus | 28.44 | 28.19 |
| CDY45986 | Canola | cytosol | 26.95 | 28.12 |
| CDY32316 | Canola | nucleus | 25.75 | 28.01 |
| CDY53250 | Canola | nucleus | 27.54 | 27.38 |
| CDY02636 | Canola | nucleus | 27.54 | 27.3 |
| CDX75813 | Canola | nucleus | 25.15 | 27.27 |
| CDX82444 | Canola | nucleus | 25.15 | 27.18 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 27.25 | 26.53 |
| CDX96262 | Canola | nucleus | 28.44 | 25.89 |
| CDY28805 | Canola | nucleus | 28.44 | 25.89 |
| CDY42901 | Canola | nucleus | 26.65 | 25.87 |
| CDX98529 | Canola | mitochondrion | 20.96 | 25.64 |
| CDX99695 | Canola | mitochondrion | 20.96 | 25.64 |
| CDY20001 | Canola | cytoskeleton, cytosol, nucleus | 26.65 | 23.92 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078HBS2 | UniProt:A0A078HBS2 | EnsemblPlants:CDY35197 | ProteinID:CDY35197 |
| ProteinID:CDY35197.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00058100001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 |
| PANTHER:PTHR31744:SF4 | SUPFAM:SSF101941 | UniParc:UPI0004EF145A | SEG:seg | : | : |
Description
BnaA01g08340DBnaA01g08340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HBS2]
Coordinates
chrLK032348:-:38702..42022
Molecular Weight (calculated)
38254.7 Da
IEP (calculated)
6.454
GRAVY (calculated)
-0.754
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLKDIGSRL PPGFRFHPSD EELVCHYLCN KIRAKYDQAL NGATDLVEID LHTCEPWQLP DVAKLNAKEW YFFSFRDRKY ATGYRTNRAT ISGYWKATGK
101: DRTVMDPRTS QLVGMRKTLV FYRNRAPNGI KTTWIMHEFR LECPNMPPKE DWVLCRVFNK GRDSTLQDTN NEHQTQRFEV NDAPDLNYNN QSQPLLLSPP
201: SNTIDPPHHH DQWEQLIKQP SRSTDHPYHH NCQHQTVACG WEQMMIGSMS SSSSHGPDHE SLLNLLYADN KNSVNITDDN YGHNYGKILL SSDITSLDHD
301: KTCMASSSDG GMVSDLHMEC GGLSFETENL LAFQ
101: DRTVMDPRTS QLVGMRKTLV FYRNRAPNGI KTTWIMHEFR LECPNMPPKE DWVLCRVFNK GRDSTLQDTN NEHQTQRFEV NDAPDLNYNN QSQPLLLSPP
201: SNTIDPPHHH DQWEQLIKQP SRSTDHPYHH NCQHQTVACG WEQMMIGSMS SSSSHGPDHE SLLNLLYADN KNSVNITDDN YGHNYGKILL SSDITSLDHD
301: KTCMASSSDG GMVSDLHMEC GGLSFETENL LAFQ
001: MGLKDIGSKL PPGFRFHPSD EELVCHYLCN KIRAKSDHGD VDDDDDDVDE ALKGSTDLVE IDLHICEPWE LPDVAKLNAK EWYFFSFRDR KYATGYRTNR
101: ATVSGYWKAT GKDRTVMDPR TRQLVGMRKT LVFYRNRAPN GIKTTWIMHE FRLECPNIPP KEDWVLCRVF NKGRDSSLQD NNYYNNDNQT QRLEVNDAPD
201: LNYNNQLPPL LSSPPHNHQH EKMKIQVCDQ WEQLMKQPSR TTGHPYHHHC HHQTIACGWE QMMIGSLSSP SSHGPDHESL LNLLYVDNNN SVNISGDHHQ
301: NYEKILLSSL DMTSLDHDKT CMGSSSDGGM VSDLHMECGG LSFETENILA FQ
101: ATVSGYWKAT GKDRTVMDPR TRQLVGMRKT LVFYRNRAPN GIKTTWIMHE FRLECPNIPP KEDWVLCRVF NKGRDSSLQD NNYYNNDNQT QRLEVNDAPD
201: LNYNNQLPPL LSSPPHNHQH EKMKIQVCDQ WEQLMKQPSR TTGHPYHHHC HHQTIACGWE QMMIGSLSSP SSHGPDHESL LNLLYVDNNN SVNISGDHHQ
301: NYEKILLSSL DMTSLDHDKT CMGSSSDGGM VSDLHMECGG LSFETENILA FQ
Arabidopsis Description
anac074At4g28530 [Source:UniProtKB/TrEMBL;Acc:Q8GUJ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.