Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04060.1 | CDY22597 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | CDY41739 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | CDY43007 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | CDY60257 | AT1G32230.1 | 19548978 |
| AT3G04060.1 | CDY67026 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02626 | Sorghum | cytosol | 45.35 | 54.55 |
| CDY51707 | Canola | cytosol | 47.09 | 51.27 |
| CDX92881 | Canola | cytosol | 47.09 | 49.69 |
| GSMUA_Achr10P... | Banana | cytosol | 63.95 | 48.25 |
| HORVU3Hr1G014090.1 | Barley | nucleus | 60.47 | 47.93 |
| TraesCS3B01G092800.1 | Wheat | cytosol | 59.3 | 47.89 |
| TraesCS3A01G077900.1 | Wheat | nucleus | 58.72 | 47.2 |
| GSMUA_Achr5P07600_001 | Banana | cytosol | 67.44 | 47.15 |
| CDY68680 | Canola | nucleus | 56.98 | 46.67 |
| Bra040153.1-P | Field mustard | nucleus | 93.02 | 46.65 |
| AT3G04060.1 | Thale cress | nucleus | 90.12 | 45.86 |
| CDY70041 | Canola | nucleus | 56.98 | 45.79 |
| HORVU2Hr1G017360.1 | Barley | nucleus | 40.12 | 45.39 |
| TraesCS3D01G078500.1 | Wheat | nucleus | 58.14 | 44.44 |
| CDY50879 | Canola | cytoskeleton, cytosol, nucleus | 88.37 | 44.31 |
| CDY42901 | Canola | nucleus | 87.21 | 43.6 |
| CDX70804 | Canola | nucleus | 81.4 | 41.54 |
| CDY51238 | Canola | nucleus | 81.4 | 41.54 |
| HORVU2Hr1G017380.1 | Barley | cytosol, nucleus, plastid | 55.81 | 40.85 |
| CDY66026 | Canola | cytoskeleton, cytosol, nucleus | 61.05 | 40.54 |
| CDY53250 | Canola | nucleus | 79.07 | 40.48 |
| CDY02636 | Canola | nucleus | 79.07 | 40.36 |
| CDY69936 | Canola | nucleus | 66.28 | 40.28 |
| CDX67433 | Canola | nucleus | 67.44 | 40.28 |
| CDY64672 | Canola | nucleus | 65.12 | 39.58 |
| CDY37008 | Canola | nucleus | 65.7 | 39.24 |
| CDY30258 | Canola | nucleus | 65.7 | 39.1 |
| CDX74442 | Canola | nucleus | 65.12 | 38.75 |
| CDY14030 | Canola | nucleus | 67.44 | 36.83 |
| TraesCS2A01G101200.1 | Wheat | nucleus | 58.72 | 36.59 |
| TraesCS2D01G100800.1 | Wheat | nucleus | 57.56 | 35.87 |
| CDY40775 | Canola | nucleus | 67.44 | 35.8 |
| CDX86391 | Canola | cytoskeleton, cytosol, nucleus | 63.95 | 35.6 |
| GSMUA_Achr7P18330_001 | Banana | nucleus | 62.79 | 35.06 |
| GSMUA_Achr9P16920_001 | Banana | cytosol | 62.21 | 34.97 |
| Os07t0684800-01 | Rice | cytosol | 61.05 | 34.88 |
| CDY56940 | Canola | nucleus | 66.28 | 34.86 |
| GSMUA_Achr3P18020_001 | Banana | nucleus | 59.3 | 34.81 |
| CDX75966 | Canola | nucleus | 56.4 | 34.52 |
| CDX85242 | Canola | cytosol | 63.37 | 33.96 |
| GSMUA_Achr3P09520_001 | Banana | cytosol | 62.21 | 33.65 |
| TraesCS7B01G094000.1 | Wheat | nucleus | 52.91 | 33.33 |
| CDY42875 | Canola | nucleus | 62.21 | 32.92 |
| CDY51910 | Canola | nucleus | 47.67 | 32.8 |
| Zm00001d022517_P001 | Maize | nucleus | 60.47 | 32.7 |
| TraesCS4B01G174000.1 | Wheat | cytosol | 64.53 | 32.55 |
| Zm00001d047554_P001 | Maize | cytoskeleton, cytosol, nucleus | 65.7 | 32.47 |
| CDY18519 | Canola | nucleus | 56.98 | 32.45 |
| CDY51941 | Canola | nucleus | 56.4 | 32.44 |
| Os01t0104500-01 | Rice | cytosol, mitochondrion, nucleus | 59.88 | 32.19 |
| TraesCS4A01G130600.1 | Wheat | nucleus | 63.95 | 32.16 |
| TraesCS4D01G176000.1 | Wheat | nucleus | 63.95 | 32.16 |
| CDY20103 | Canola | nucleus | 56.4 | 32.01 |
| CDY32316 | Canola | nucleus | 56.98 | 31.92 |
| CDY69369 | Canola | nucleus | 56.4 | 31.91 |
| EER97754 | Sorghum | nucleus | 61.63 | 31.83 |
| CDX75813 | Canola | nucleus | 56.98 | 31.82 |
| HORVU4Hr1G051360.3 | Barley | nucleus | 63.95 | 31.79 |
| EER92328 | Sorghum | cytosol | 65.7 | 31.74 |
| CDX82444 | Canola | nucleus | 56.98 | 31.72 |
| CDY67593 | Canola | nucleus | 56.4 | 31.6 |
| GSMUA_Achr6P08600_001 | Banana | nucleus | 63.37 | 31.41 |
| Os01t0393100-01 | Rice | nucleus | 59.88 | 31.4 |
| Zm00001d028995_P001 | Maize | cytosol | 63.95 | 31.34 |
| GSMUA_Achr6P32290_001 | Banana | nucleus | 62.79 | 31.21 |
| CDX76817 | Canola | nucleus | 56.4 | 30.6 |
| CDY20314 | Canola | nucleus | 56.4 | 30.6 |
| CDY34773 | Canola | nucleus | 56.4 | 30.6 |
| TraesCS5A01G245900.2 | Wheat | nucleus | 58.14 | 30.49 |
| CDY23558 | Canola | nucleus | 48.26 | 30.29 |
| VIT_08s0007g07640.t01 | Wine grape | nucleus | 70.93 | 30.27 |
| CDY60115 | Canola | nucleus | 48.84 | 30.11 |
| KRH08479 | Soybean | nucleus | 71.51 | 30.0 |
| Os03t0327100-01 | Rice | nucleus | 62.21 | 29.89 |
| KRG94783 | Soybean | nucleus | 70.35 | 29.88 |
| Zm00001d005028_P001 | Maize | cytosol | 55.81 | 29.81 |
| CDY45986 | Canola | cytosol | 55.23 | 29.69 |
| CDX82566 | Canola | nucleus | 47.67 | 29.6 |
| KRH70130 | Soybean | nucleus | 70.35 | 29.51 |
| TraesCS5B01G243300.1 | Wheat | nucleus | 45.93 | 29.48 |
| TraesCS2B01G118400.1 | Wheat | cytosol, nucleus, plastid | 59.88 | 29.34 |
| TraesCS2A01G101100.1 | Wheat | cytosol, nucleus, plastid | 59.3 | 29.31 |
| CDY20001 | Canola | cytoskeleton, cytosol, nucleus | 63.37 | 29.3 |
| CDY20411 | Canola | cytosol | 54.65 | 29.28 |
| TraesCS2D01G100900.1 | Wheat | nucleus | 59.88 | 29.18 |
| TraesCS2B01G118200.1 | Wheat | cytosol, nucleus, plastid | 59.3 | 29.06 |
| KRH06738 | Soybean | nucleus | 68.6 | 28.99 |
| TraesCS2B01G118500.1 | Wheat | cytosol | 59.3 | 28.98 |
| TraesCS2A01G101400.1 | Wheat | cytosol | 58.72 | 28.61 |
| TraesCS7B01G056300.1 | Wheat | nucleus | 58.72 | 28.29 |
| CDX87602 | Canola | cytosol | 54.65 | 28.06 |
| CDX88273 | Canola | cytosol | 54.65 | 27.89 |
| TraesCS7B01G100300.1 | Wheat | nucleus | 52.33 | 27.86 |
| TraesCS7D01G189900.1 | Wheat | nucleus | 52.33 | 27.86 |
| TraesCS7A01G152500.1 | Wheat | nucleus | 57.56 | 27.81 |
| TraesCS2D01G100600.1 | Wheat | cytosol, nucleus, plastid | 59.3 | 27.72 |
| TraesCS7D01G543400.1 | Wheat | nucleus | 54.65 | 27.65 |
| TraesCS7D01G154200.1 | Wheat | nucleus | 56.98 | 27.53 |
| HORVU7Hr1G031260.1 | Barley | nucleus | 56.4 | 27.4 |
| CDX96262 | Canola | nucleus | 57.56 | 26.98 |
| CDY28805 | Canola | nucleus | 57.56 | 26.98 |
| TraesCS7D01G196300.1 | Wheat | cytosol, nucleus, peroxisome | 54.65 | 26.93 |
| TraesCS3B01G092900.3 | Wheat | nucleus | 55.81 | 26.89 |
| CDX98529 | Canola | mitochondrion | 42.44 | 26.74 |
| CDX99695 | Canola | mitochondrion | 42.44 | 26.74 |
| TraesCS2A01G101000.1 | Wheat | cytosol, nucleus, plastid | 59.3 | 26.7 |
| HORVU2Hr1G017400.3 | Barley | nucleus | 59.3 | 26.63 |
| HORVU7Hr1G039700.1 | Barley | nucleus | 53.49 | 26.59 |
| TraesCS7B01G489500.2 | Wheat | cytosol | 53.49 | 26.51 |
| CDY42401 | Canola | nucleus | 48.84 | 26.17 |
| CDY10515 | Canola | nucleus | 48.84 | 26.09 |
| OQU89451 | Sorghum | cytosol | 56.4 | 26.08 |
| Os12t0123800-01 | Rice | nucleus | 59.88 | 26.01 |
| HORVU4Hr1G089450.1 | Barley | cytosol, mitochondrion, nucleus, peroxisome | 52.91 | 26.0 |
| Zm00001d052390_P001 | Maize | nucleus | 55.81 | 25.88 |
| TraesCS7A01G189200.1 | Wheat | nucleus | 52.33 | 25.79 |
| TraesCS7A01G194700.1 | Wheat | nucleus | 52.33 | 25.79 |
| TraesCS7A01G569300.1 | Wheat | cytosol | 54.07 | 25.69 |
| HORVU7Hr1G122680.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 54.65 | 25.41 |
| Zm00001d040189_P002 | Maize | mitochondrion, nucleus, peroxisome | 57.56 | 25.32 |
| TraesCS2B01G118300.1 | Wheat | cytosol | 56.98 | 25.26 |
| EES02651 | Sorghum | nucleus | 58.14 | 25.0 |
| HORVU2Hr1G017350.1 | Barley | nucleus | 57.56 | 24.94 |
| KXG28945 | Sorghum | cytoskeleton, nucleus, peroxisome | 53.49 | 24.8 |
| EES07908 | Sorghum | nucleus, peroxisome, plastid | 56.98 | 24.69 |
| HORVU3Hr1G014100.1 | Barley | cytosol, nucleus | 54.07 | 24.67 |
| TraesCS7A01G569100.1 | Wheat | nucleus | 54.07 | 24.47 |
| TraesCS7D01G543500.2 | Wheat | endoplasmic reticulum | 54.07 | 24.47 |
| CDX97445 | Canola | cytosol | 47.09 | 24.11 |
| CDY14236 | Canola | cytosol | 47.09 | 24.11 |
| CDY35197 | Canola | nucleus | 46.51 | 23.95 |
| TraesCS2D01G100700.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 59.3 | 23.89 |
| HORVU2Hr1G017370.1 | Barley | cytosol, nucleus, plastid | 58.72 | 23.76 |
| EES17917 | Sorghum | cytosol | 55.23 | 23.63 |
| CDY38380 | Canola | nucleus | 46.51 | 23.26 |
| Zm00001d008403_P001 | Maize | plastid | 42.44 | 22.67 |
| TraesCS5A01G143100.1 | Wheat | nucleus | 52.33 | 22.33 |
| TraesCS5B01G141900.1 | Wheat | nucleus | 51.74 | 22.19 |
| TraesCS5D01G148900.1 | Wheat | nucleus | 51.74 | 22.14 |
| GSMUA_Achr8P21470_001 | Banana | nucleus | 63.37 | 21.12 |
| Os11t0127000-01 | Rice | nucleus | 36.05 | 21.02 |
| HORVU5Hr1G045640.7 | Barley | mitochondrion | 51.74 | 19.56 |
| CDX92880 | Canola | nucleus | 2.33 | 2.02 |
| CDY51708 | Canola | nucleus | 2.33 | 2.01 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078GXM6 | UniProt:A0A078GXM6 | EnsemblPlants:CDY29982 | ProteinID:CDY29982 |
| ProteinID:CDY29982.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00044503001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31744 |
| PANTHER:PTHR31744:SF46 | SUPFAM:SSF101941 | UniParc:UPI0004EE540F | : | : | : |
Description
BnaC01g40260DBnaC01g40260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GXM6]
Coordinates
chrLK032247:-:240301..241121
Molecular Weight (calculated)
19724.8 Da
IEP (calculated)
9.502
GRAVY (calculated)
-0.494
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MLEEGGVVVN QGGDQEMVDL PPGFRFHPTD AEIIIHYLKE KVFNVRFTSA AIGQADLNKN EPWDLPKIAK MGEKEFYFFC QRDRKYPTGM RTNRATVSGY
101: WKATGKDKEI FRGKGCLVGM KKTLVFYRGR APKGEKTNWV MHEYRLDGIY SYHNLPKTAS VCNSTIFTEL LV
101: WKATGKDKEI FRGKGCLVGM KKTLVFYRGR APKGEKTNWV MHEYRLDGIY SYHNLPKTAS VCNSTIFTEL LV
001: MVEEGGVVVN QGGDQEVVDL PPGFRFHPTD EEIITHYLKE KVFNIRFTAA AIGQADLNKN EPWDLPKIAK MGEKEFYFFC QRDRKYPTGM RTNRATVSGY
101: WKATGKDKEI FRGKGCLVGM KKTLVFYTGR APKGEKTNWV MHEYRLDGKY SYHNLPKTAR DEWVVCRVFH KNAPSTTITT TKQLSRIDSL DNIDHLLDFS
201: SLPPLIDPGF LGQPGPSFSG ARQQHDLKPV LHHPTTAPVD NTYLPTQALN FPYHSVHNSG SDFGYGAGSG NNNKGMIKLE HSLVSVSQET GLSSDVNTTA
301: TPEISSYPMM MNPAMMDGSK SACDGLDDLI FWEDLYTS
101: WKATGKDKEI FRGKGCLVGM KKTLVFYTGR APKGEKTNWV MHEYRLDGKY SYHNLPKTAR DEWVVCRVFH KNAPSTTITT TKQLSRIDSL DNIDHLLDFS
201: SLPPLIDPGF LGQPGPSFSG ARQQHDLKPV LHHPTTAPVD NTYLPTQALN FPYHSVHNSG SDFGYGAGSG NNNKGMIKLE HSLVSVSQET GLSSDVNTTA
301: TPEISSYPMM MNPAMMDGSK SACDGLDDLI FWEDLYTS
Arabidopsis Description
anac046NAC domain-containing protein 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SQQ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.